Ictalurus furcatus (blue catfish): 128618576
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Entry
128618576 CDS
T09387
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15 isoform X1
KO
K16499
protocadherin delta 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128618576 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
ifu04515
]
Cadherins
Protocadherins
128618576 (si:ch73-233f7.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Nodulin_late
Motif
Other DBs
NCBI-GeneID:
128618576
NCBI-ProteinID:
XP_053498226
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All DBs
Position
14:10721307..10730605
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AA seq
1000 aa
AA seq
DB search
MEQGHERRQWTSAWSAFRLLMCVCALDRVLAQIRYSVLEEREHGAFVGNIAEDLGLDVSR
LSARRFRIVSGARKQYLEVNLENGILFVNEKIDREELCEQSPVCFLHLQVVIENPLELYR
VEVEILDVNDNAPSFPWSEFNLEVTESAAPGSRFPLESAQDLDAGSNSLRSYLLSANQHF
VLDVQTRNDGSKFAELVLESPLDREKQKMHEMVLTAVDGGSPLRSGTAQIMVTVLDANDN
VPVFDRSVYRVSLVENAPRGTLVLKLNATDLDEGSNGEIVYSFSGHAPLKVRELFSIDSY
SGEIRVKGIVDYEKASVYELYVQAKDKGPSAVAVHCKVLVDILDVNDNAPEVILTSVSTP
VQEDAPPGTVIAVISVMDRDSGENGAVDCQIPSHVPFRLHSSFKNYYTLATSEFLDRELV
AEYNITLTARDLGSPPLSTGKTIHVLVSDVNDNPPRFLQPSYTVYVTENNAPGASICSVS
AVDPDSNQNAYLSYSILEGQIRGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQAR
DAGFPPLSGNVTVSVFVLDQNDNAPLVISPLPKNGTAAAETVPRSADAGYLVAKITALDA
DAGQNSRLSYQVLHATDPGLFSIALYTGEIRTIRRFVDKDATRHRLVILVKDNGQPSLSA
TVSLILTLVDGVPESLSDLDDHAISRRAPSNLAFYLIISLSVVSLVFLVAIIVLAALKCY
KDRDCPGDFGLSSIGAACCTLESEPPAEACKKSNLNLQISTGTKVPTNCVESSTGTTAQN
YCYKVCLTPESAKSDFMFMKSYSLNTPRNNAEAEKMARSSQSRGSANNGATTPNELKQDN
TNWALTKNQTSTLKSYNSINMDGTLMKKVMQTDSENYVSPVAAGQYWTWGTRMRECKMSS
PATGLHERAWTPRYTPTKTPQQQQPSGQTHSHPPPDYQHNVYIPGTPSALCTLRPSNRSE
LDVHNTFSTFGKKRKFISPSSYDPRDETGTEVINNDLYNE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagggcacgagaggaggcaatggacatcagcgtggtcagcttttcgcctgctt
atgtgtgtgtgcgcgttggaccgggtgctcgcccagattcggtactcggttctggaggag
cgcgagcacggcgcatttgtcggtaacattgccgaggacttgggcttggatgtctccagg
ttgtctgccaggcgattccgcatagtgtccggagctaggaaacaatatttagaggtcaat
ttggaaaacgggattttgtttgtgaacgagaagattgatcgagaggagttatgcgaacag
agtccggtttgtttcttgcacttgcaggtggtcattgaaaacccactggaactgtaccga
gtggaagttgagatcttagacgttaacgacaacgctccgagttttccgtggagcgagttc
aatctagaggttaccgagtctgcagcgccgggctcacggttcccactcgagagcgcacaa
gacctagacgcgggatccaactcactccgctcgtacctgctgagtgctaaccaacacttt
gtactggacgtgcagacgcgcaacgacgggagcaagttcgcagaactcgtgctggagtct
cccttagaccgagagaagcagaaaatgcacgaaatggtcctaaccgccgtggacggcggc
tctccgctgcgctctggcactgctcagatcatggttacagtactggatgcgaacgataat
gtccctgtattcgacagatctgtttaccgggtgagcctggtggagaacgcaccgagagga
acgctagtgctcaagctcaacgccacggatctggacgaaggctcgaacggcgagatcgtc
tattcattcagcggtcacgcgcccttgaaagtgcgcgagctgttcagcatagattcttat
tcgggtgaaattcgggtgaaggggattgtagattacgaaaaagccagcgtctacgagctc
tatgtgcaggctaaagacaaaggtccctctgctgtggccgtgcactgtaaagtacttgtc
gatatattggacgtgaacgacaacgcgccagaggtcatcctgacctctgtctccacacct
gttcaggaagacgcgcctccggggaccgtgatagccgtgatcagtgtcatggatcgtgac
tccggagaaaacggagcagtggactgtcagatccccagccacgtcccttttaggcttcac
tcgtcctttaaaaactattacactctggcgactagcgaatttctggacagagagttggta
gccgaatacaacatcactctcacggcgcgagatttaggctcgccaccgctctccaccggg
aaaactattcatgttcttgtgtcggacgttaatgacaatcctccgcgcttccttcagccg
tcctacaccgtctatgtgaccgagaataacgcaccgggcgcttccatttgctctgtgagc
gcagtcgatccggactctaaccagaacgcctatctatcctactctatcctggagggtcaa
ataaggggcatgccggtgtccacgtatgtttctattaactcggacaatggcaacatttac
gctcttcgctccttcgactacgagcagctccgcaactttcagatccgagttcaggcgcgg
gacgccggtttcccgccgctgagcggaaacgtgactgtaagcgtgtttgttttggaccag
aacgacaacgcaccactagtcatttccccgctgccgaagaacggcacggcggctgctgag
accgtgccgaggtcggcggacgcaggctacctcgtagcaaaaattacagcgctggacgca
gacgccgggcaaaactctcgtctctcgtaccaagtgctgcacgccacggacccggggctg
ttcagcatcgcgctttacacgggtgaaattcggaccatccgccgcttcgtagacaaagac
gccacaagacacagactcgttatactggtcaaggacaatgggcagccctctctttcggcc
accgtatctctcattctgacactagtggacggagtgccggagtcgctgtcagacctcgat
gaccatgctatcagccgccgagcgccttctaacctcgccttctatctgatcatctcattg
agcgtggtatcgctcgtcttcctagtagccatcatcgtactggcagcgctgaagtgctac
aaagaccgggactgtcctggagatttcggtctgtcctctatcggtgctgcgtgctgcaca
ctcgaatccgagccgcccgccgaagcatgcaaaaagtccaacctgaatctgcagatttcc
accgggacgaaagtgcctacgaactgtgtggagagcagcaccggaaccacggctcagaac
tactgctacaaggtgtgcctgacacccgaatcagccaaaagtgacttcatgttcatgaaa
tcgtacagtctgaacacgccgagaaataacgcggaggctgaaaagatggcgcggagctca
cagagccgcggttcggcgaataacggagcgacaactcctaacgagttaaaacaagacaat
actaactgggctcttaccaagaaccaaacatcaactttgaaaagttataactcaatcaat
atggatggcacgctcatgaagaaggtcatgcagactgattctgagaactatgtaagtcca
gtggctgcaggacagtactggacatggggaacacgaatgagagagtgcaaaatgtcttcc
cctgcaaccggcctccatgagcgggcatggacaccccgctacacccccacaaaaactccc
caacagcagcagccttcaggtcaaacacatagtcatcctccacctgactaccaacacaat
gtctacatccctgggactccatctgccctctgtaccctgcggcccagtaaccgcagtgag
cttgatgtccacaacaccttctccacctttggcaagaaacgcaagttcatctcccccagc
agttatgacccaagggatgaaacaggtactgaggtgatcaataatgacctgtataatgaa
tag
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