Ictalurus furcatus (blue catfish): 128618633
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Entry
128618633 CDS
T09387
Symbol
lingo4a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4a isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128618633 (lingo4a)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128618633 (lingo4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
LRR_1
Ig_2
ig
LRR_LRWD1
V-set
LRR_EndoS
Sp38
Motif
Other DBs
NCBI-GeneID:
128618633
NCBI-ProteinID:
XP_053498323
LinkDB
All DBs
Position
14:complement(26066058..26074345)
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AA seq
627 aa
AA seq
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MASCVVKLKVELQMFGEAADWWKVYWWVAQLCIVGVSVEGTPPWPCPHNCECLHEPLKVN
CSSCHLNSVPEGIHKNTQSLSLANNLLKTLGKHQFSDLKQLQELDLSENMLTVIEVQAFS
GLQNLLILRISQNRLKIILVGVFSGLQRLRLLDISKNEILVFLNDMFYEMPSLQKLEVND
NDLVFISNRAFSGLLYLQELNLDGYNLTSFPIEALSQLPRLVRLRFCHTGLTVLPNNSFR
HLTQLRALTVSHWHRLDTLLPNSLTGLNLTSLTLSYCNMSSVPYDSLRHLVYLLYLDLSY
NPITSIQPHLLRDLLRLREFHLVGGNLQRIEPGAFSGLVHVQLFNVSLNQLSTLEETVFQ
STGTLQVLRLDGNPLACDCRLFWVLQRHMHIKVNEQPPSCSSPVQVHGRTFQEFTDSELP
VLFICRPARILNHKPQEVHVDEGQTVLFLCQVDGDPSPSVIWVSPQRAVLPTTGRIRVLS
NGTLEVRYVQVQDSGIYYCFASNVAGNDSISVSLWVRSFVTSSSHNRSAHFFLDGWSFTS
AHPPVNGSYDSHPFPFDLKTLLVAVTMGFLSFLSSVAACFIFMFFWSQSKGQIKHTATID
FVPHSTGAGSGGGRTRMETGRFNMKLI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctgtgtggttaaactgaaggtggaactccagatgtttggggaagctgctgat
tggtggaaggtgtattggtgggtggcacaactgtgcatagtaggagtatcagtagaagga
accccaccttggccatgccctcacaattgtgagtgcttacatgagcctctcaaggtcaac
tgctcctcatgtcacttaaattctgtaccggaaggtatccataaaaacacacaaagcctc
agtctggccaataatctcctgaagacacttggaaaacatcagttctctgacctgaaacag
cttcaggaactggatttgagtgaaaacatgctgacagtgattgaagtgcaagcattctct
ggcctgcaaaaccttctcattctaaggatttcccaaaatcgtcttaagatcattttggtt
ggcgtgttctctggacttcagcgtctccgtctgctggacattagcaagaatgaaatcctt
gtctttctcaatgacatgttttatgagatgccatcactacagaagttggaagtgaatgac
aatgatcttgtattcatctcaaaccgtgccttcagtggcctactatatcttcaggaactt
aacctggatggctataaccttacctcattcccaatcgaggcactgtcacagcttcccagg
ctggtgcggctgcgtttctgtcacactggtctcacagtgctacccaacaattcatttagg
catctgactcagctcagggcgctgacagtgtcccactggcacagactggatacactgtta
cctaatagcttgactggacttaacctcacctctctgacactcagctactgcaatatgagc
tctgtgccatatgattctttgcgccatctggtctatctgctctacttggacctgtcctac
aaccctattacctccatccagccacatctgctcagagaccttctacggctgcgagagttc
catttggttggtgggaatttgcagaggatagaaccaggtgctttcagtggccttgttcat
gttcagctattcaatgtatcattaaatcaactgtcaacactagaagagactgtgtttcaa
tcaacagggacacttcaggtacttcggctggatgggaacccacttgcttgtgactgcaga
ctattttgggttctgcaacgtcatatgcatataaaggttaatgagcagccacccagctgt
tcatcacctgtacaggtgcatggtagaacattccaggagttcactgattctgagcttcca
gtgttgtttatttgtagaccggcacgtattctaaaccacaagccacaggaggtgcatgtg
gacgagggccaaacagtcctgttcctttgccaagtggatggagacccttccccctctgtt
atctgggttagtcctcagcgggcggttctgcccaccacaggtcggatccgtgtgctgtcc
aatggaacccttgaggtgcgttatgtacaagtacaagacagtggcatctactactgcttt
gcatccaatgtggcagggaatgacagtatttctgtcagtctgtgggtgagaagttttgtc
acgtcctcatctcataaccgctctgcccacttctttcttgatgggtggagttttacatcc
gcccatccaccagtaaatggctcatacgattctcatccatttccatttgacttgaagaca
ctactggttgcagtaacaatgggcttcctgtcattcctgagctctgtggctgcttgcttt
atattcatgttcttctggagtcagagcaaagggcaaatcaaacacacagccacaattgac
tttgtacctcacagtacaggagcaggatctgggggaggacggaccagaatggagactggc
aggtttaacatgaagctcatctga
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