Ictalurus furcatus (blue catfish): 128618680
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Entry
128618680 CDS
T09387
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128618680 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128618680 (myo5c)
04131 Membrane trafficking [BR:
ifu04131
]
128618680 (myo5c)
03029 Mitochondrial biogenesis [BR:
ifu03029
]
128618680 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128618680 (myo5c)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128618680 (myo5c)
mRNA cycle factors
P-body specific factors
128618680 (myo5c)
Membrane trafficking [BR:
ifu04131
]
Others
Actin-binding proteins
Myosins
128618680 (myo5c)
Mitochondrial biogenesis [BR:
ifu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128618680 (myo5c)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128618680 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ERM_helical
Csm1_N
ATG16
nSTAND3
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
128618680
NCBI-ProteinID:
XP_053498400
LinkDB
All DBs
Position
14:23985635..24014670
Genome browser
AA seq
1744 aa
AA seq
DB search
MALSELYTKYNRVWVPDAEQVWKSAELLRDYTPGDPALHLQLEDGAEIQYPVEVDGLLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRIRFVDSKIIYTYCGIILVAVNPYKQLPIYGD
AVIRAYSGQNMGDLDPHIFAVAEEAYKLMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADQPQFKSLRLLGADKFNYTCMGGEMEIQGVDD
RADMAETCRTFTLLGLKDDFQSDVFKMMAGILHLGNVVIKAVGSDQSSVSSTDSHLAVFC
DLLEVREEDMCRWLCHRRIVLASETVIKPQPRERAINARDALAKHLYAYLFDCIIHRINQ
ALRVPGNQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDENWLQKLYNFLSSKPMFEKPR
LSNEAFVIHHFADRVEYQCKGFLEKNRDTLYEEMLDVMRASKFPLLADFFHEKEPNSVHP
ANRAKVKAARPGVKPANKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFE
YDSKRVVQQLRACGVLETVRISAQSYPSRWTYIEFYSRYSILMSQAELRLEEKKQTCRTV
LQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRTACVTIQKHVRGWTQRRRYLHMR
EAAIIIQQYVRGKRQIRRMVTAAALKQGWAAVVIQRHCRGYLVRRIYQLVLVATVTIQAY
TRGWIARKCYKKMVEEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKLEE
QNKENRGLMERLTSLANAHAQGLDRMQSLEVELSKAANERLSVEEREKKRKEETNQTIAQ
LQSERDQVKLENQALQAKLKDSIEQMTDNFEELKKKLIQDLEREERLRKVAEHSSELQKE
DLDKEIAALKEENLRLREDKIQLRAQAEEDTQINKELQEQLGQLTKHVKVIPELHKEINS
LQNERIEADRKMKEQAEQTRAKMNIITRQLLGETKDEEIILRLTKEATEAAGDEGDLPFA
LIRLQNATRLVETHLREQREDYKSKLEALVFKNDHLSRENQQLQALFQEKNNVNQSIGQE
VARLTAENMAIPELKQQVTELQRHKQELEAQLEKQCTEMTENNTRVSSKLEEESSQRRLL
EERNRESEREREEMGKRLEELEETVEQLKRLQQTDNEAKSKLRQETSRLTAENMDFEEQL
DTKDRTIKRLQDQIKALQAPLKASEKAGPAVPKEYLGMLEYKKDDEGRLVRTLILELKPR
GVVVNMIPGLAAHLLFMCIRHADYLNDGEKLKSLMRAIITGIKQVTTNHQENFEVLSFWL
SNTYYLLNCLKQYSGEEEFMKHNTPRQNKNCLQNFDLSDHRQVLSDLAIQIHHQFINVME
DALFPMIVHGMLEHESLQGISSMKPTGFRKRSNSMLGDGLREGEGQSYSISSILQLLSDF
HSCMSQQGMDQQLQGQAFRQLFYLIGATSLNSILLRKDLCSCRKGMQIRCNISYLEEWLR
DKGLQAYNVMETLGPLSQAAWLLQVNKTTDDDAAEIQQRCHELSPVQIVKILNSYTPIDD
FEKRVAPSFVRKVQALLQEREGSNQLMMDGQYRFQVTFPFCHTTQALELLQVPNSLHLSF
VTRI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctcggagctgtacactaagtataacagagtatgggtgccagatgcagagcag
gtgtggaagtcagcggagctcctgagagactacacacctggagatccagctctacacctg
cagctagaggatggagctgagatccaatacccagtggaggtggacggtctgttacccccc
ctacgtaacccagacatcctggtgggggagaatgacctaaccgctctgagctacctccat
gaaccggctgtgctgcacaacctgcgcatcagatttgtggactctaagataatctataca
tactgtggcattatcctagtggcggtaaacccatataaacagctccccatttatggagat
gcggtcatccgtgcttattctggccagaacatgggagatctggaccctcatatatttgct
gtggcagaagaagcttataaactgatggcaaggaacaacaagaaccagtccatcatagtc
agtggggagtctggagcagggaagaccgtgtctgctcgctacgctatgagatactttgca
atggtcagcaaatctagcagcaacactcgggtggaggacaaggttttggcatcgaacccc
atcactgaagcaataggtaacgcaaagaccaccaggaatgacaacagcagccgatttggg
aaatacactgaaatcagctttgaccggagataccagatcatcggagctaacatgaggaca
taccttctagaaaagtctagggttgtttttcagtcagagaatgaaagaaactatcacatc
ttctatcagatgtgtgcttgtgcagaccaaccacaatttaagagcttgagactgttgggt
gcagacaagtttaactacacctgcatgggaggggagatggagatccaaggagtggatgat
cgtgctgatatggctgaaacctgccgcactttcaccctgctgggactaaaggatgacttt
cagagtgatgtgttcaagatgatggcagggattttgcacttgggcaatgtggtgatcaaa
gcggtcggctcagaccagtcatccgtcagctctactgactctcacctggctgtgttctgt
gatctgcttgaagtcagagaagaagatatgtgtcgctggttatgtcatcggcgtattgtc
ctggcttctgagaccgtgatcaaaccgcagccaagggaacgtgccataaatgcccgagat
gcactggccaagcatctttacgcttatctctttgactgcatcatccacaggattaaccag
gccctgcgtgtgcctggaaatcagcactcgtttattggagttctggatatctatggattt
gaaaccttcgatgtgaatagcttcgaacagttttgcatcaactacgccaatgagaaactc
caacaacagttcaacttgcacgtgtttaaactagagcaagaggagtacatgaaggaggac
atcccctggacgctgattgatttctatgacaaccaaccagtcattgatcttatcgaagcc
aaaatgggcatcctggacttgctggatgaggagtgtctgtttcctcagggtactgatgag
aactggctgcagaagctctacaattttctgagctcaaagcctatgtttgagaaacctcgt
ctatccaacgaggcgtttgtgatccatcactttgcagaccgggtagaatatcagtgtaaa
ggtttcttggagaagaatagagataccctctatgaagaaatgctggacgtaatgagagcc
agcaagtttcctctcttggcagatttctttcatgaaaaggaaccaaattccgtgcatccc
gcgaatcgtgccaaagtgaaagcagcacgacctggagtcaaaccggccaataagcaactt
agaaccactgtaggagataagtttcggagttcattgtatctgttaatggaaactcttaat
gctactacgccgcactacgtccgctgcattaaacctaacgaggagaagctgccatttgaa
tatgactcaaagcgtgtggtgcagcagctgcgggcctgtggagtactagagactgttcga
attagtgctcagagctacccatctaggtggacctacatcgagttctacagccgttacagt
attctgatgagccaggccgagctccgattggaggagaagaagcaaacatgtagaacagtg
ttgcagaggcttattcctgactctaatcagtataagttcggacggaccaaaatcttcttc
cgagcgggccaggtggcgtatctggagaagctgcgtttggattatctgcgcactgcatgc
gtgaccatccagaagcatgtgagaggctggactcagagacgcaggtatctgcacatgaga
gaagccgccatcatcatccagcagtacgtccgtggcaagaggcagatcaggcgcatggtt
acagcagcagctctgaagcagggctgggcagctgtggtcatccagaggcactgtcgtggc
tatcttgtgcgccggatttaccagcttgtcctggtggctacagtcactattcaggcatat
accaggggatggattgcccgcaagtgctacaaaaagatggtggaggagcataaagctctg
gtcctgcagaagtacgctcgggcctggctggtgcgtcgccgcttccagaccatgcgccga
ctcgtgataaacgtgcagctctcgtacagagtccagcagctgcgtaagaaattggaggaa
cagaataaagagaaccgtggtctgatggaaaggctgaccagtctggccaatgctcatgct
cagggattggacaggatgcagtccctggaggtggagcttagcaaagcagccaatgagagg
ctatctgtagaagagagagagaagaagagaaaagaggaaaccaatcagacgatcgctcag
cttcagagcgaaagggatcaagtcaagctggagaatcaggctctccaggcgaaactcaaa
gattccatagaacaaatgacagacaattttgaagaactgaagaaaaagctcatacaggac
ctagagagagaagagaggctgcgaaaagtcgcagaacacagcagtgagctgcagaaggag
gacctggataaagagattgcagcgctgaaggaggagaatctcaggctgagggaagacaaa
atccagctacgggctcaggccgaggaggacacacagatcaacaaagagctccaggaacag
cttggccagctcaccaaacatgtcaaggtgataccagagttacataaagagatcaacagc
ctccagaatgaaagaatcgaagcagacagaaagatgaaggagcaagctgagcagaccaga
gcgaaaatgaatattattaccagacagcttctgggtgagacaaaagacgaggagatcatt
ctcaggttgacaaaagaggcgacagaagctgccggtgatgagggagatctaccgtttgca
cttatcaggctgcagaacgccaccaggctggtggagacccatttacgggagcaaagggaa
gattacaaaagtaagctggaggcactggttttcaaaaatgatcacctgagtagagagaac
cagcagctacaagccctctttcaggagaagaacaatgtcaaccaaagcattggacaggag
gtggcccggctcactgctgaaaacatggcgatccctgaactgaagcagcaggtaacagag
ctacagcgtcacaagcaggagctggaagcacagctagagaaacaatgcaccgagatgact
gaaaataatacaagggtatccagtaagcttgaagaggaaagctcacaaagaaggcttttg
gaggagaggaacagagaaagtgagagagaaagagaggagatggggaagaggctggaggag
ctagaggagacagtagagcagcttaagagactccagcaaacagacaacgaagccaagagc
aaactcagacaggagacgtcacgccttacagctgagaacatggactttgaagagcaatta
gatacgaaagaccgaaccataaagaggctgcaggaccaaatcaaagctcttcaggcacca
ctgaaagccagtgagaaagccggaccagctgttccgaaagaataccttggcatgctggag
tataagaaagacgatgaaggcaggcttgtgcggacattaatacttgagctcaagccgagg
ggagtggtggtgaatatgatccctgggttggcggcccatctgctctttatgtgcattcga
catgctgactatctcaatgatggagaaaagctcaagtccctcatgcgtgccatcatcaca
ggaatcaaacaggtgaccacgaaccatcaggaaaactttgaggttttgtctttctggctc
tccaacacatactacctgctcaactgcctcaaacagtacagtggagaagaagagtttatg
aagcacaatacacctcggcagaataagaactgcctgcagaactttgacctttcagatcac
agacaggtcttgagcgatcttgccattcaaatccatcaccagtttatcaatgtgatggag
gatgccctattccctatgattgtccatgggatgctggagcacgagagtctgcagggcatc
tcaagtatgaaacctacaggtttccgtaaacgctccaacagcatgctgggagacgggctc
agagagggcgagggccagagctacagcatctcctccatcctgcagctgctgagcgacttc
cacagctgcatgtcacagcagggcatggatcagcagctgcagggacaagccttccgccag
ctcttctacctgattggagccacctcgctcaacagcatcctcctccgcaaggatctctgc
tcctgccgcaagggcatgcagatcaggtgtaatatcagttacttggaagagtggctgagg
gataaaggtcttcaggcctacaatgttatggagactctggggccgctgtcccaggctgcc
tggctcctacaggtgaacaaaaccactgacgatgatgcagctgagatccagcaaagatgc
cacgagctctcaccggttcagatcgtgaagatcctcaactcgtacactcccatcgacgac
tttgaaaagcgagttgcgccgtcttttgtgcggaaagttcaggcgctgctacaggaacgt
gagggctcgaatcagttgatgatggacggacagtatcgcttccaggttactttcccgttc
tgtcacaccacacaagctctggagctcctgcaggtgcccaacagcctccacctgagcttt
gtcacccgcatatga
DBGET
integrated database retrieval system
