Ictalurus furcatus (blue catfish): 128619029
Help
Entry
128619029 CDS
T09387
Symbol
soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128619029 (soga1)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128619029 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Striatin
TSC22
Motif
Other DBs
NCBI-GeneID:
128619029
NCBI-ProteinID:
XP_053498841
LinkDB
All DBs
Position
15:complement(10419462..10491148)
Genome browser
AA seq
1766 aa
AA seq
DB search
MTKTKVDAASPNHFVSAKEKRLRSKMETESGCETGDGVQTQAVSHEKKKPHRAPSPARPK
DVPGWSITKIRGGIGTPTLSVKPGAIHLGSRLSRRSPVIGKETKGEKMGKSPGKSALSAV
AATKSSVKSNKAARRKASDASIASDDLSKDSGKESGKLSATDSSSELSDCASEENKLSTD
ALSSDTESSSRGGAESEHAAAGQSSARGESEGQRCTLGGDARQESITPGDERSLTSLDSR
MPASTSLAFSDLNEELTDGMHEEYLREIEELRSENDYLKDEVEELRSEMLEMRDMYMEED
VYQLQELRQQLEQANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVS
IRLHNELDAVEKKRSRLEQENEVLQVKLQDLEVAKQVLQAELEKSRENSLKKRGARPNNK
PEKKMSPQPPEDSSDLKCQLHFAKEESALMCKKLTKMVKDNEVMKEELTKYRSLYGDMDT
SLTMDEVADSPHMREAEVRIHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQETPG
GLAVATGVGQLLISPSADNVMELQRHLQFVEEEADLLRRSLIEMEEQNKLLMNELNRYKS
ELPPDSDFESLSPSTILPPSITPGVATSEEGALNEASQEELLAARLQISDLSSKVKKLQY
ENRILLSNLQRCDLASRHVDIRPSLETDAEAGDSAECVPSPEHPMDGEENQPLEDKGEMV
TGNNHSLSDQCLSIKELLAIRDQAQLITSAIQLLMSADSSCLLAVSSDTILHKITTREPG
EAGFLEKNQVQSSNLSLVEALHSRLQSLQAQLQALSQRIEVLGESPENKLSSVALVSQSA
EPCPIDSQVNQITVQQKPNIRDQADVKGQDVEADESNSNTDSNKDHVTDLSDTNCALLLE
QVRELQAQLCEAEEKAEKTQEALALENQAHLEYTQSCSQKLSQLQEEHKKVLVRQDFQLQ
SMSLQTRLQQKFWSQERNVLVQESQQLKQILLLVSLKLRWLLKQWRLGKKFDAEDKNMLQ
INSIKEFHHPLEDDGLAPLHGDNKMAATKEQPPSPTNKDCSLPENNLQQASGLSATLSDL
KVALQDLSTELREERQSSQELTQQFARAKASWEVERTELKSLITQLEGKAGKMSAAGNDM
DPPDLKGALKREREENQHLLADSYAAVMDLTKQLQINERNWSREKLELLEHFNQERNQWE
QRLHDAQSKSTQSLNCNGISTDAPTNETTLQRTQPISSLSDLESLLDVASFLPHNEVNGI
AEGKAGKHQFNDLVTRKDLSGLNQKNWKYLSSESASLEKTEPFKTWDCPSTSFPELQLSV
EHVQRSYTAPDKTGIRIYYSPPAVRRMERKVKDLSLNDAQLGLRFFSATNSDQAVLPQPT
QTSSSQLSSSYEQWLSSLSQQHRDLLEGRTGSSGALHTLEISANLSDDMKEMTNCVRQAI
RSSSLERKCSKDAGSQTVGFTSTGTQTAKFVSVGLQTESPASPASRGAGFHGKVWSPRPS
TSLTSARSRQISSSLEKVHGRIDRPCCSPKYGSPKLTRRVSASSSSSKLETSSTSSRDRS
MWNLPNRSIAQSGSAWARSTTTRDSPVLSGLNDGLSSLFSVVEHTSSMESLWRGDTCPGR
QAAGKPSCPSVGISLGESSTQKYGIVQEFFQNVCGRTLPGEKTATIDEPKPECLTGALMG
TDSVTKIVNKRFMRQTLRDDAVVSEKESHSSASSPEDSSCDCKSQSLTSCFARSSRSTVR
HTHSQCKHRIQETALGNDERLDVSTE
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaaggttgacgccgcgtccccgaatcacttcgtctcggccaaggaaaag
agactcaggagcaaaatggaaacggaaagcgggtgtgaaacaggcgacggcgtacaaaca
caggcggtaagccacgagaagaagaaaccgcaccgcgcgccgtcgcccgcgagacccaaa
gacgtcccgggatggtccatcaccaagatccggggagggatcggcacaccgaccctcagt
gtgaaaccgggggcgatccatttagggagccgtttatccagacgcagccccgttatcggg
aaagaaacaaagggtgagaagatggggaaatcaccagggaaatccgcgctgtctgcagtc
gctgctacgaagagtagcgttaaatcaaacaaggccgctcggaggaaagcatcagacgcc
agtatcgcgtccgacgatctgagcaaagactcgggcaaagagtccggcaaactctcggcc
actgacagcagctccgagctctccgactgcgcctcagaggaaaacaagctgtccacggac
gcgctgagcagcgataccgaaagcagcagccgtggcggggctgagagcgaacacgcggcc
gctggacagagcagcgctcgcggggagagtgagggacagcggtgcacgttgggaggagac
gccaggcaggaaagcattactccaggggacgagcgctccctcacctcgctcgacagccgg
atgccagctagcacatctctggccttctctgatcttaacgaggagctaacagatggcatg
cacgaggaatatctccgagaaatcgaagaactgcggtctgaaaacgactatttaaaggat
gaggttgaggagctacgctcagagatgctggagatgagggacatgtacatggaggaggat
gtgtaccagctccaggagcttaggcagcaactggagcaggccaacaagacatgtcgtatc
ctgcagtaccgactacgcaaggccgagagacgcagcctgcgtgtggctcaaaccggccag
gtggacggcgagctcatccgtaccctggagcaagatgttaaggtggccaaggacgtgtcc
atccgcttgcacaatgagctggacgcagtggagaagaagaggagtcgtctagagcaggag
aacgaggtgctgcaagtgaagctccaggacctggaggtggccaagcaggttctgcaggct
gagctggagaagagccgagagaattctcttaaaaagcgaggtgcaaggccaaacaacaaa
cctgagaagaagatgtcaccacagcctccagaggatagttctgacctgaagtgccagctc
cattttgccaaggaggagtcagcacttatgtgcaagaaactcaccaagatggtgaaagac
aatgaggtgatgaaggaggaactgaccaaataccgttcactctatggtgacatggatacc
tcactgaccatggatgaggtggctgactcgccccacatgcgtgaagccgaagtccgaatt
cacttgaagctggttgaggaggaagctaacttgctgagtcgacggatagtggagctagag
gttgagaatcgtggtctccgggctgaaatggatgacatgaagattcaggagactccagga
ggtcttgcagttgcgacaggagttgggcagctgctaatttcaccttcagctgataatgtt
atggagctgcagcggcatctgcagtttgtagaagaagaagcggatctgctgagaaggtca
ctgattgaaatggaggagcagaacaagctcctaatgaatgaacttaatcgatacaagtca
gaacttcctcctgattctgattttgagtccttgtcaccctctaccatccttcctccatcc
atcactcctggagtggcaacttctgaagaaggggctctaaatgaggcatcccaagaagag
ctcctggcagccaggcttcaaatcagtgacctgagcagtaaggtaaagaagctccagtat
gagaaccgcattttgctgtccaacctccaacgctgtgacctggcttccagacatgtggac
attcggccttccctggagactgatgcagaggcaggggactcagctgagtgcgtacctagc
ccagaacacccaatggatggtgaagagaaccagcctctggaggacaagggtgagatggtg
acaggaaacaaccattctctttctgatcagtgcctcagcatcaaagaactcttggccatc
cgtgaccaggcccaattaattacctcagcaatccagctccttatgtctgctgattccagc
tgtcttctagctgtctcatcagacacaattttacataaaatcacaactagggaacctgga
gaagctggattcctggagaagaaccaagttcagagttctaatctgtctctagttgaggcc
cttcacagtaggcttcagtctctgcaggcccagctgcaggctctcagtcagaggatagag
gtcctgggagagtcccctgagaataagctttcatctgtggctctagtctctcagtcagct
gagccctgccctatagattctcaggtcaatcagatcacagttcaacagaagcccaacatt
agggaccaagcagatgtcaaaggtcaagatgtcgaagctgatgagagcaacagcaatacc
gacagcaacaaagaccatgtgacagacttgtcggacaccaactgtgcactgcttctggag
caggttcgtgaacttcaggctcagctgtgtgaggcagaggagaaggctgagaaaactcag
gaggcactggcactggagaatcaagctcaccttgaatacacacaatcctgctcccagaaa
ctctctcagctgcaggaggagcacaagaaggtgttggtgcgacaggatttccagctgcag
agcatgagcctgcaaacacggctgcagcagaagttctggagccaggagaggaatgtcttg
gtgcaggagtcccagcagctgaagcagatccttctgctggtcagcctcaagctacggtgg
cttctcaaacagtggaggcttggcaagaagtttgacgcagaggacaagaacatgttgcag
attaacagcattaaggagtttcaccaccctctggaggatgatggccttgcccctctccat
ggagacaataagatggcagccaccaaggaacagccaccaagtcccacaaacaaagattgc
agccttcccgagaataaccttcagcaggctagtggtttgagtgcgactttgtctgacctg
aaggtggctctgcaagatctgagcaccgagctgcgagaggagcgtcagagctcccaggaa
ctaacacagcagtttgcccgagctaaggcctcctgggaggtggagcgcactgagctcaaa
agcctcatcacccagctggaggggaaggcagggaagatgtctgcagctggtaatgacatg
gatcctccagatctgaagggggctctgaagagggagcgcgaggaaaaccagcacctgctg
gcagactcatatgctgcagtgatggatctgaccaagcagttacagattaacgagagaaac
tggagccgggagaagctggagcttcttgaacatttcaatcaggagagaaaccagtgggag
cagaggctccatgatgcccagagcaagagcacacagtctcttaattgcaatggaatatcc
acagatgcacccacaaatgaaacaactttgcagagaacccaaccgatttcctctttgtca
gacctcgagagtttgctggatgtcgcttctttccttccacataatgaggtcaatggaatc
gctgaggggaaggctgggaagcaccagtttaatgaccttgtaacccgcaaagatctgagt
ggcctcaatcagaagaactggaagtatctcagtagcgagtcagcttctctggagaagact
gagccctttaaaacctgggactgccccagcacaagctttccagagctacaactgagtgtg
gagcatgtgcaaaggagttacactgccccagacaaaacaggtatccgaatatactacagc
cctccagctgtcaggaggatggaaaggaaggtcaaggatctgagcttaaatgatgcccag
ctgggactcagatttttcagtgcgactaactctgatcaagcggtactgcctcaaccaaca
caaacgtcatcatcacaattgtcatcctcttatgagcagtggctaagctcattatcccag
cagcacagggacctactggagggcaggacgggaagctctggggccctccacacccttgag
atttctgcaaatctgagtgacgacatgaaggagatgaccaattgtgttcggcaggctatt
cgttccagctctcttgagaggaaatgcagcaaagatgcaggaagtcagactgtgggcttc
accagcactggaacacagacagctaagtttgtcagtgtgggcttgcagacagagagtcca
gcctccccagcctccagaggggcaggatttcatggtaaggtgtggtctccacgcccatcc
acctcactcacttctgcacgatcccgccagatctcctcgtcactggagaaggtgcacggc
cgcatcgaccgaccctgctgctcaccaaaatacggctcacccaagctcacaagaagggtc
tctgcttcatcctcatcctccaagctggagacatcttctacctcctcaagagatcggagc
atgtggaatctgccaaaccgtagcatcgcccagagtggatctgcatgggctcggtccacc
acgacccgtgacagtcccgtactcagtggcctcaatgatggtctgtccagcctcttcagt
gttgtggagcacacctccagcatggagtcactctggaggggtgacacatgccctggaagg
caagctgcaggcaagccctcttgccccagtgttggcattagccttggtgagtccagcact
cagaagtacggcattgtgcaggagttctttcagaatgtgtgtggacggacattgccagga
gagaagactgcaaccatagatgagcccaagcctgagtgtctcactggtgccctgatggga
acagacagcgtcactaagatcgtcaataagaggttcatgagacagacattgcgggatgat
gcagtagtcagtgagaaggagtctcattcaagtgccagtagtccagaggattcatcttgt
gactgcaaatcacagtccctcacctcttgttttgctcgctcctcccgctccactgttcgg
cacacccacagtcagtgcaagcaccgcatacaggagactgccttgggaaacgacgagaga
ttggatgtcagcactgagtga
DBGET
integrated database retrieval system