Ictalurus furcatus (blue catfish): 128619036
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Entry
128619036 CDS
T09387
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128619036 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128619036 (scn8aa)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128619036 (scn8aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
ATP-synt_B
GPHH
Neur_chan_memb
FraC
Phage_T7_Capsid
HpsJ
Motif
Other DBs
NCBI-GeneID:
128619036
NCBI-ProteinID:
XP_053498853
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All DBs
Position
15:complement(20353043..20416625)
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AA seq
1661 aa
AA seq
DB search
MILTVFCLSVFALIGLQLFMGNLRHKCVIWPINITELYQANGSHTFNWNEYIMNETNFYK
LPGSLDALLCGNGSDAGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLMTQDFWEN
LYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEAAQKEEEFKA
MLEQLKKQQEEAQANAMATSAGTVSEDAAEDDGVENLSCSSSEMSKLSSKSAKERRNRKK
KWKQKEQDKEKGDSEKFVKSESDDGSKKRFRFPDNRLGRRSSIMNQSLLSIPGSPFLSRH
NSKSSIFSFRGRCRDAGSENEFADDEHSTVEECDQRRGSLFSPYRRSSYSGYHGKHNSTV
DCNGVVSLIGPGLGGRLLPEVIIDKAASDDSPTTDTEIKKKLSGSLMVSMDQLNASFGHK
ERANSVMSVTNTLVEELEESQRNCPPCWYKFANTYLIWECCPIWLKIKEIVNLIVMDPFV
DLAITICIVLNTLFMAMEHYPTTDQFDHVLTVGNLVFTGIFTAEMVAKLVAMDPYYYFQE
GWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGAL
GNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKIHVDCELPRWHMNDFFHSFLIVFRVLCG
EWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAASDDDGEMN
NLQISVNRIKFGIAWVKAKIRQLVRARRKMVDEAKPLDELYDKKLNCIANHTDINRELDY
QKDANGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAAGESDFENLNTEDFSSESEA
EGSKDGLDDSSSSEGSTIDIKPEVEEAVVVEAVEEYVDPEPCWTEACVARYKCCDVSITE
GWGKSWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRKTIRIILEYADRV
FTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVVVNALVGAIPSIMNVLLVCLIFWL
IFSIMGVNLFAGKYYYCFNETSEEYFKPEVVNNKTQCFDLIYSNYTEVRWKNVKINFDNV
GAGYLALLQVATFKGWMDIMYAAVDSRKLEEQPVYEDNIYMYLYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGIVFDFV
TQQVFDISIMILICLNMVTMMVETDDQSQETENILYWVNFIFIVVFTTEFVLKLFALRHY
YFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT
LLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKREAGIDDMYNFETFGNSMIILF
MITTSAGWDGLLAPILNYAPDCNPDKENPGTSVKGNCGNPSVGIFFFVMYIIVSFLIVVN
MYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPTASQFITFAKLSDFADTLEHPL
RVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPS
KISFEPITTTLRRKQEHMSASVIQRAYRAHLVRRGFICKRLLSSGKLENGGTNQEKKEDT
PSTASLPSYDSVTKPEKEKLDEIESKGKNGKNQKDIKESKC
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaccgtgttctgtctcagcgtgttcgctctaatcggcctgcaactcttcatg
gggaacctgcggcacaagtgtgtcatctggccaatcaacatcactgagttataccaggcc
aacggcagccacaccttcaactggaacgagtacatcatgaacgagactaatttctacaaa
ctccctggcagcctggatgctctgttatgtgggaacggctctgatgctggtcgctgtcct
gaaggctacacatgtatgaaggctggacgcaatccaaactacggctacaccagctttgac
agctttggctgggcatttcttgctctttttcgcctcatgacacaggacttctgggagaac
ttgtacatgctgactctacgagcagcagggaagacctacatgatctttttcgtgctggtg
atcttcgtgggctcgttctacctggtcaatctgatcctggctgtggtggccatggcctat
gaagagcagaatcaagccaccatggaggaagcggctcaaaaggaggaggaattcaaagcc
atgctggaacagcttaagaaacagcaagaggaagcccaggcgaacgccatggccacatca
gcaggtacggtgtcggaggatgcagcggaggatgatggagtagagaacctgtcgtgtagc
tcctccgagatgtccaaactcagttccaagagcgccaaggagcgcaggaaccgcaagaag
aagtggaagcagaaggagcaggacaaggaaaaaggggacagcgagaagtttgtcaaatcg
gaatcagatgatggcagcaagaagaggttccgtttccctgacaaccgcttaggccgaagg
tcctccatcatgaaccagtctctcctcagcatccctggctcacccttcttatcacgccac
aacagcaagagcagcatcttcagcttcagaggccgctgccgggatgcaggctctgagaac
gagtttgcagacgacgagcacagcactgtggaggagtgcgatcagagacgtggctcgctg
tttagcccataccgccggagcagctacagcggctaccacggcaaacacaacagcacggtg
gactgcaacggggtcgtatctctaatcgggcccggtctgggaggacgcctactgcctgag
gtgataatagataaggcagcttctgacgacagcccaaccactgacactgagatcaagaag
aaactctcaggctctttaatggtttctatggaccaactcaatgcttcttttgggcacaaa
gagcgagcgaacagcgtcatgagtgtcaccaatacattagtagaggaactggaggaatcg
cagagaaactgtccaccatgctggtacaagtttgccaacacttaccttatctgggaatgc
tgccccatatggctgaagatcaaggagattgttaacctgatcgtgatggacccctttgta
gacttggctatcaccatatgcatcgttctcaacactctgttcatggccatggagcattac
ccgacgacggaccaatttgatcacgtgttgactgtgggcaacctggtattcactggaatc
ttcacagcagaaatggtggctaaactagttgcaatggacccatactactacttccaggag
ggctggaacatctttgatggctttatcgtgagcctgagtttgatggagcttggactggct
aatgtggagggcctgtctgtgctcagatcatttagattgctgcgagtgtttaagctggct
aagtcatggcccactttgaacatgctgataaagatcattggaaactcagtgggcgctctg
gggaacctgactctggtcctggccatcattgtcttcatctttgccgtggtgggcatgcaa
ctgtttgggaagagctacagggactgcgtgtgtaagatccatgtagactgcgagctgccc
cgttggcacatgaacgacttcttccactccttcctaatcgtgttccgtgtgctgtgtgga
gaatggatcgagaccatgtgggactgcatggaggttgcgggccagaccatgtgtctcacc
gtgtttatgatggtcatggtcattggaaacttagtggtgctgaatctgttccttgccttg
ctgctgagctcattcagtgcagacaacctggcagcctcggacgatgatggagagatgaac
aacctgcagatctctgttaaccgtataaagtttggcatagcctgggtaaaggccaaaatt
cgtcagttagtgcgtgcccggaggaagatggtggatgaggccaagcctctggacgagctg
tacgacaagaaactgaactgcatcgctaaccacacggacatcaaccgcgagttggactac
cagaaagatgccaacggcaccaccagtggcatcggcagcagtgtgggcaagtacatgatc
gacgaggaccacatgtccttcatccacaaccccaatctgaccgtgtgtgtgcccatcgcg
gcaggggagtccgactttgaaaacctgaacacggaggacttcagcagcgaatcagaggct
gaaggcagcaaagacgggctggatgacagcagctcgtcagaaggcagtactatagacatt
aagccagaggtcgaggaagctgtggtggtggaggcagtggaggagtatgttgacccagag
ccatgctggactgaagcttgcgttgcgcgctacaagtgctgtgacgtgtctatcactgag
ggctgggggaagagctggtggtacctccgcaagacctgctatctcattgtggagcacaac
tggtttgaaacgctcatcatcttcatgattcttctgagtagtggagctttggcttttgaa
gatgtctacatcgagcagaggaagactatccggatcatcttggagtacgccgaccgggtg
ttcacctacatcttcatcctggagatgctgctgaaatgggtggcctacggttttgtgaag
tatttcaccaacgcctggtgctggctggacttcttcatcgtggatgttgtagtcaacgcc
ttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttggctg
attttcagtatcatgggcgtcaatctgtttgcggggaagtattactactgcttcaatgaa
acttctgaggaatactttaaaccagaggtggtgaacaacaagacgcagtgctttgacctc
atctactcaaactacactgaagtgcgctggaagaatgtaaagatcaattttgacaacgtg
ggtgctggctatctggctctgctccaagtggctactttcaaaggttggatggacattatg
tatgcagctgttgattcacgaaagttggaagaacagcccgtgtatgaggacaacatctat
atgtacctttactttgtcatcttcattatttttggctcgtttttcactctcaacctgttt
attggtgtcatcatcgacaatttcaaccagcaaaagaaaaagtttggaggtcaggacatt
tttatgacagaagaacagaagaaatactacaatgcaatgaagaaacttggttcaaagaaa
ccacaaaaacccatacctagacctcagaacaagatccagggaattgtgtttgactttgtg
acgcagcaagtctttgacatctctatcatgatcctcatttgtctgaacatggtgaccatg
atggtggaaacagatgatcagtcacaggagacagaaaatatactgtactgggtgaacttc
atcttcatcgtggtcttcaccactgaattcgtcctcaagctctttgccctgcgtcattac
tatttcaccaatggttggaatatctttgactgtgttgtggtcattctttcgatagttggt
atgttcctggcagacttgattgagaagtactttgtgtcaccaacactgttcagggttatt
cgcttggctcgaattggtcgtatcctgcgtctgattaaaggtgccaaaggcatccggact
ttactgtttgccttgatgatgtcactgccagctctgttcaacatcggcttactgctcttc
ctggtcatgttcatcttctccatcttcggcatgtctaactttgcctatgtcaaacgggaa
gctggaattgatgacatgtacaattttgagacttttggaaacagcatgatcattctgttt
atgatcaccacctcagcagggtgggacggcctattggctcccatcctcaactacgctcca
gactgtaatcctgataaggagaacccaggtacctcggtaaagggtaactgtggcaatcct
tccgtgggcattttcttctttgtcatgtacatcattgtgtctttcctgatcgtggtaaat
atgtacatcgctattatcctggaaaactttagtgtggcgacagaagagagtgctgatccg
ctgtgcgaagatgactttgagtccttctatgagatctgggagaagtttgatcctacagct
tcgcagtttatcacgtttgcgaagctcagtgactttgctgacactctcgagcacccccta
cgggtgcctaagcccaacacaatagaactcattgccatggacctgcccatggtgagtgga
gaccgaattcactgcctggacatcctgtttgcctttaccaagcgtgttctgggcgacagt
ggtgacctggacatgatgcggcagcagatggaggagcgctttattgcagccaatccctct
aagatatctttcgagcccatcaccaccacgttgcggcgcaagcaggagcacatgtctgct
tcggtcatccagcgtgcttaccgagcccaccttgtacgcagaggcttcatttgcaagcgc
cttttaagcagtggcaagctagagaatggagggaccaaccaggagaagaaggaggacacg
ccctccactgcctcactgccctcctacgacagcgtgaccaaacctgagaaagaaaaactg
gatgaaatcgaaagcaaaggcaagaacggcaaaaaccaaaaagacatcaaggaatcaaag
tgttag
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integrated database retrieval system
