Ictalurus furcatus (blue catfish): 128619194 Help Entry 128619194         CDS       T09387                                  Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism ifu  Ictalurus furcatus (blue catfish) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen Pur_ac_phosph_N VWA_2 Fn3_Dep-1_2nd YjeF_N Motif Other DBs NCBI-GeneID:  128619194 NCBI-ProteinID:  XP_053499164 LinkDB All DBs Position 15:complement(15612489..15649942) Genome browser AA seq 1583 aa AA seqDB search MRREDSGQSRVASGPTVLWCSLGLLSRLPLCPCPMSAFVGIILLILASEVSTQGRLKLTV LSEDRLQMKWKEAEGPVQGYKVRVRTISDVPEPELMLTTTRGRATVAGLNSKQEYLLQVL VLNGTVEKLIAKRRFTINVLREEEEARNGNPKHKRKVQAIGSGSGEMDDATEVLESLPTV LYQDPTTIEPPTIADQEEQEVEKGKDKKKKKKDKNRTKTNDEKVDSRGKPAEKEHKVRKN TPVTAGSSHKPFECRAGVQADLVLLVDGSWSIGRTNFKKVREFLEGLVTPFRIGPYGVQI ALSQYSGDPRTEWQLNNFTSKEQLLDAVRNFRYKGGNTFTGQALIHVLEENLKEEVGARS DTPQFLLLLTDGKSQDDAIAAASRLKNAGVEIIAVGVKNADEAELKQVASEPLELNVYNV NDFPLLSKLVGRLVRILCGKMEERSKTRRAHPTEDPGLSYPSPIDLRYSELGPKEVRLSW TGPGRVVQQYRVVFHSSEGQSPQEVVVKGSNSTVMLTGLSSQTQYHVSIFPVYEDNVGSP LRGIFTTSMLAMPESLEVTASSPSGLRVRWRPAHGATQYMALYSALADGEPDDAQEVKFR ADETDVELRDLMPSTDYSVTVYALYEDEPSDPVTAIATTFPLPSPVSLQFPMVGHSTLKV TWVPGAVDVPAHRVTYSTNHGSDVKQVEVAGVNTVLLQNLSSLSKYLVSVQSLYVKGLST PLTGNITTLRVPAPSELRVTNYSENTLTVRWEPAADDVTSYLIKWISLSGGDLRQLKVDG ESEGATLEGVEDDKEYQISLSALYADGAQSEAVAIRYSTLFGGGPTSVSISEETAVSMLV SWVPPNAHVLQYHVSYTPLTGDARENKVLLPGSERRVLLQSLFPDTRYSVLVTAEYRNRE GGSASAQGKTTSLRVSSVSVVRSDHSSICVSWRPVAAITAYHIVIQALRDKQIKEETVKS TSSSHCFNELQPETVYRISVHSRLGTVESTAVTILHPTAAAPLRAHVPPRLHPIQKEMCP EMTIRNSVIKGFNMMEAFGLTQRAHSTVEGVSVEPFIFSTIPSYTLYRDVQLTQSTGFIH PAGFSPEHTISLAFRLLQDSPKEPFALWQLTDNDFQPKMGVVLDPERKVLLYFSLDYRGE VQELTFDQSQVHTLFYGSFHKIHLSISQVSVSLSVDCQRVGERPARPLGNIPTDGFEMLG KLVRTRGPRSGSAAFQLQSFEIICNITWALEDTCCDLPSQRDEESCPALPYACTCTSNIP GAPGDTGSPGKPGPRGQKGEKGEGGQKGEMGPPGKAGPEGGLGPLGSLGPRGITVMGKIG PPGIRGEKGEMGRPGNQGLPGPPGPKGEVGNPGPKGTRGVEGNMGPPGTTGPRGFQGIPG HPGPVGERGPLGLVGPSGLPGIKGERGEKGEPQSLAIIYDLVTQACEKLVHNEVLKLDAF LNEIRRTPVPVEEPVGPPGEPGIPGGKGPPGSRGPPGRQGNRGESGRPGYPGEQGRRGLP GEKGDPGSNVQGPPGIKGFSGPPGESKMGIPGPRGEDGKSGIPGIPGAAGQPGEIGPPGV CDSSGCHRGGPPAAEDPYYGYQP NT seq 4752 nt NT seq  +upstreamnt  +downstreamnt atgcgcagagaggacagcggacaaagccgcgttgcttcaggtccaacagtgctttggtgt tctttaggtcttctctcacgtcttcctctctgtccatgtccaatgtcagcctttgttggg ataattcttctaatactggcctctgaggtttctactcaaggccgattaaaactgacggtt ttgtcagaggaccggctccagatgaaatggaaggaggctgaagggccagtgcaaggctac aaagtcagagttagaacaatttcagatgttcctgagccagagctgatgctgaccacaaca cgtggtcgggccactgtggcaggcctcaactccaaacaagagtatttgctacaagtgctg gtgctgaatggaactgtggagaaactcatcgctaaaagacgcttcacaattaatgtgctg cgggaggaggaggaggcccgcaatggaaacccaaagcacaagaggaaggtccaggccatt ggctcaggctctggtgagatggacgatgccactgaagttctggagtcactgcccactgtt ctctaccaggatccaaccactatagaacctcccactattgctgatcaagaggaacaagag gtcgaaaagggcaaagataagaaaaaaaagaagaaagacaaaaaccgtacaaagacaaac gatgagaaggttgatagcagaggtaaacctgcagagaaggagcacaaagtgagaaaaaac accccagttacagctggatcctctcacaagccgttcgagtgcagggccggggtgcaggct gatcttgtcctgctggtagatggctcctggagtattggacgcactaacttcaagaaggtg cgggagttcctggagggcctggtcacccccttccgcatcggcccatatggagtgcaaatt gccctgtcccagtacagtggagaccctcgcactgagtggcagcttaataacttcacatcc aaagagcagctccttgacgctgtccgaaacttccgatacaagggagggaacaccttcaca ggtcaggctctcattcatgtcctggaggagaatttgaaggaagaggtcggggccaggtca gataccccacaatttctgctgcttttgacagatggtaaatctcaggatgatgccattgct gcagccagtaggctgaagaacgcaggagttgagatcatcgctgtgggtgtaaagaatgcg gatgaggccgagctgaagcaggtagcgtctgagcctctggagctgaatgtgtacaacgtg aacgatttccctctgctcagtaaactggttggtcgactggtgcgcatcctgtgtgggaaa atggaggagcgcagcaaaacaagacgtgcgcatcccactgaagacccaggcctgtcctac ccgagtcccatagacttgcgatactctgagcttggtcccaaggaggtgcgtttgagctgg acaggtccgggcagagtggtgcagcagtacagggtggtgttccacagcagtgagggacag agtccacaggaggtggtggtgaaggggtcaaactccacagtgatgctcactggactgtcg tcacagacacagtaccatgtgtcgatctttcctgtatatgaggacaatgtgggctctcct ctgagaggcatcttcactacatcaatgctggccatgcctgagtctctggaggtcactgca tcctctcccagcggtctccgggtgcgctggaggcctgctcatggagctactcagtacatg gccctctattcagctctcgctgatggagagcctgatgatgctcaagaggtgaaatttaga gctgatgagactgatgtagagctgcgagacctgatgccttctacagactactcagtcact gtgtacgctttgtatgaagatgagccaagtgatcctgtcaccgctatcgctaccacattt ccactaccatctcctgtcagtctgcagttcccaatggtcggtcacagcactcttaaggtc acatgggtgcctggggcagttgatgttcctgcccatcgtgttacctacagcacaaatcat gggagtgatgtcaaacaggtggaggtggcaggtgtgaacacagtcttactgcagaatctg tcctctctgtcaaagtatctggtgtctgtgcagtctctctatgtaaaaggcctctctact cccctcactggtaacatcactacattaagggtgcctgctccgtctgagcttcgggtcact aactactctgagaacactctaacagtacgctgggagccggctgcggacgacgtgacctcc tacctgattaaatggatctctctgagtggaggagacctgaggcagctgaaagtggatgga gagagtgaaggagccacactggagggggttgaggatgataaagagtatcagatctcacta tctgccctctatgctgatggagcacaaagtgaggctgtggctataagatacagcaccttg tttgggggaggtcccactagtgtgtccatctctgaagagactgcagtcagtatgctggtc agctgggttcctcctaatgctcatgtgctgcagtaccacgtgtcctacactcctttaact ggagatgcacgggagaacaaagtgttgttgccaggcagtgaaagaagagtccttctgcag tctcttttccctgacactcggtacagcgtgctggttactgctgaataccgtaacagagag ggaggcagtgcctccgcacagggcaaaaccaccagtctacgtgtgagcagtgtgagcgtg gttcggtctgatcattcaagtatctgtgtgtcctggaggccagtagcagcaatcactgca taccacatagtcatccaggccctcagagataagcagataaaggaggaaacggtcaaatca actagcagcagtcactgtttcaatgagctacagccagagacagtgtatcggataagcgtg cactcccgcctaggaacagtagagagcactgctgttactattctccatcccacagctgca gcaccattaagagcacacgtccctccaagactacatcccatacaaaaggaaatgtgtcct gagatgactatcaggaatagtgtgattaaaggctttaacatgatggaggcatttggtctg actcagagagcccactccactgtggagggtgtttcagtggagccttttatcttcagcact attcccagctacaccctctacagagacgtacagctgacccaaagcacaggctttatccat ccagcaggcttttctccagagcacacaatcagtttggccttccgcctgctgcaagactca cccaaggagccctttgctctttggcagctcactgacaacgatttccagcccaaaatggga gtggtgctggaccctgaaaggaaagtgttgctctacttcagtctggactacagaggagaa gttcaggagcttacttttgaccagtcacaagtccacactctcttttatggcagctttcac aagattcacctgtccattagtcaggtgagtgtatccctgtcagtggactgtcagagggtt ggtgagagacctgcccgtcccctaggaaacatacccactgacggctttgagatgctgggc aagctagtgaggactcgagggccacgcagtggctctgctgctttccagctgcagtcattt gagatcatatgtaacattacctgggccttagaggacacatgctgtgacctgccctctcag agagatgaggagagttgcccagctcttccatatgcgtgcacctgcacttccaacatccca ggagcccctggggatacaggatctccggggaaacctggtcctcgtgggcagaagggggaa aaaggagagggaggccaaaagggtgaaatggggcctcctggaaaggctggtccagagggt ggcttaggtcctctggggtccttgggccctcgtggtataacagtgatggggaaaataggg cctccaggaattcgaggagagaaaggtgaaatgggaaggcctgggaaccagggtttgcca ggaccacctggcccaaaaggtgaagtgggaaatccaggacctaagggaaccaggggtgtg gagggtaatatgggacccccagggactacagggccaaggggcttccagggtataccaggc cacccagggcctgttggagaaagggggccactaggacttgtagggccctcaggacttcct gggattaaaggtgagagaggagagaagggagagccacagtctcttgccatcatctacgac cttgtcactcaggcctgtgaaaagctagtgcacaacgaagtgcttaagttagacgccttt ctaaatgagattcgtcggactcctgtgcctgttgaggagcctgttggacctccaggtgag cctggaatcccgggtggtaaaggacccccaggatccagaggtcctccggggcgtcaagga aacagaggggagtcaggcagaccagggtatcctggtgagcagggacgcaggggtttgcct ggcgagaagggagatccaggctcaaatgtccagggaccaccaggaataaagggtttttca ggacctccaggagaaagcaagatggggataccaggccctcgaggtgaagatggtaaatca ggtattcctggcattcctggagctgcaggacagccaggtgagattggcccccctggtgtg tgtgacagcagcggctgccatcgtggaggccctccagctgcagaggatccatactatgga taccagccttga

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