Ictalurus furcatus (blue catfish): 128619325
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Entry
128619325 CDS
T09387
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128619325 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128619325 (cnga1b)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128619325 (cnga1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tim54
Sec62
Piezo_TM1-24
CDC45
DUF3043
DUF2207_C
SUFU_C
NPR3
Pox_Ag35
Mat89Bb
Afi1
Peptidase_U57
Menin
RNA_pol_Rpc4
CLN3
SLC52_ribofla_tr
Neur_chan_memb
DUF2126
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
128619325
NCBI-ProteinID:
XP_053499420
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All DBs
Position
15:complement(8724523..8729151)
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AA seq
657 aa
AA seq
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MSNCVKPLVPPIILLEGVEEVTVGDAEDMTKRQRSGAGTLFNVNNSNNNEEEEKKEKKKK
EKKEKKEKKERKEKKEKKEKKKKNKEQEQKEKEKEKEKEKEKAKKEEPKEIYVIDPAGNM
YYNWLFVITCPVMYNWVLIIARACFEELQHDYLIFWFITDFLADLVYLADMVFRTRTGYL
EQGLLVKDEKKLRARYMESVQFKLDLISMIPTDICYSLVGLNYPEIRMNKLFRVNRLFEF
FQRTETRTNFPNVFRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDTTNPEFGR
LVRKYAYSMYWSTLTLTTIGETPPPEKDSEYFFVVTDFLVGVLIFATIVGNVGSMITNMN
AARADFQARIDAIKQYMSFRNVTKDLEKRIIKWFDYLWTNKKAVDEREVLKYLPDKLRAE
VAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKL
AVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEA
LTEYPDAKAMLEEKGRQILMKDNLLDLEVAKQGPDPKDMEEKVIKIGTVLDDMQTRFARL
LAQHEAMQSRLKKRVARLESKIPTTGVTFTEMTETVPVVLPPPEKEGGESEEKKEEK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattgcgtgaagccacttgttcctcccataatcctcctggagggggtggaggag
gttaccgtgggcgacgcagaggacatgacgaagaggcagcgctctggtgctggcacactt
tttaacgtcaacaacagcaacaacaatgaggaagaggagaagaaagagaaaaagaagaaa
gaaaagaaagaaaagaaggagaagaaagagagaaaagaaaagaaagaaaagaaggagaag
aagaagaagaacaaagagcaagagcagaaagaaaaagagaaggagaaagagaaggagaag
gagaaagccaagaaagaggagccgaaggagatttacgtcatcgatcctgcaggaaacatg
tactacaactggctcttcgtcatcacctgtcctgtcatgtataactgggttctgatcatc
gccagagcctgttttgaggagctacagcatgattatttgatattctggttcatcactgac
tttctagcagacctggtttacctggcagacatggtcttcaggacgagaacagggtatctg
gagcagggtctgctggttaaagatgaaaaaaagctccgcgcacgatacatggagagtgtc
cagttcaagctggacctcatctctatgattcccacggatatttgttactctttggtcggt
ctcaactaccccgagatccgcatgaacaagcttttccgggtcaaccgcctctttgagttt
ttccagcgcacagaaacaaggaccaattttcccaacgtcttccgaatctccaaccttgtc
atgtacatcgtcatcatcatccactggaatgcttgcctctactactcattctccaaagct
atcggtttcggggctgataggttcgtctatccggataccacaaacccagaatttggtcgt
ttggtgaggaaatatgcatacagcatgtactggtccactttgaccttgaccaccatcggt
gaaactccacctcctgagaaggattctgagtacttctttgtggttacagacttcctagtg
ggagttttgatctttgctacgatcgttggtaatgtcggttccatgatcacaaacatgaat
gcagcacgagcggattttcaagcccgaattgatgccatcaagcagtacatgagttttcgt
aatgtgaccaaggatctggagaaacgcatcatcaaatggtttgattacctttggaccaat
aagaaggcggtagatgagagggaagtgctcaagtaccttccagacaagttaagagcagaa
gtcgccatcaatgtgcacctggacactcttaagaaagtgagaatttttgcagattgcgag
gcaggacttttggttgaacttgtgctgaagctccagccgcaagtttacagccctggcgat
tacatttgcaaaaaaggcgatattggtcgtgagatgtacatcatcaaagaaggaaagctg
gctgtggtggctgacgatggaatcacacaatttgttgtcctcagcgatggaagctacttt
ggcgagatcagcatcctcaatatcaaaggcagcaaagctggaaaccgaagaacagccaac
atacgcagtatcggatactctgatttgttctgcctttccaaggacgacttgatggaggca
ctgactgagtatccagatgcaaaggctatgctggaagaaaagggacgccagatcctcatg
aaggacaacctgctggatcttgaggtggcaaagcagggaccagaccccaaggacatggag
gagaaagtgataaagattggcacggtattggacgacatgcagacgcgcttcgcccgttta
ctcgctcaacatgaggccatgcagagccgcctgaaaaaacgtgtcgccagactggagagc
aaaatccccaccaccggggtcaccttcactgaaatgactgagacagtgccggtggttctg
cctcctcctgagaaagaggggggggaatcagaggagaagaaagaggaaaagtaa
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