Ictalurus furcatus (blue catfish): 128619388
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Entry
128619388 CDS
T09387
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128619388 (dhx35)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128619388 (dhx35)
Spliceosome [BR:
ifu03041
]
Complex C
Other components
Complex C specific factors
128619388 (dhx35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
FtsK_SpoIIIE
Cas3-like_C_2
nSTAND3
AAA_19
AAA_29
Motif
Other DBs
NCBI-GeneID:
128619388
NCBI-ProteinID:
XP_053499529
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All DBs
Position
15:25283560..25301263
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AA seq
699 aa
AA seq
DB search
MAAPHSIMKFWKPGAEAPGVCEERELNTELSSTAVIYNPHSSLSVEKQRQKLPVFKHRNN
ILYMVESFQTVVILGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATSVATRVAE
ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQRKRRDLRLIVASATLDAKKFHDFFNLNETGDPSKDTCGILTVEGRT
FPVEVFYTVSPVPDYVKATVETVLKIHEAEEDGDVLAFLTGQDEVEKVVSMLQDQARSLS
RHGLKKHLRVLPMYAGLPYSEQLKVFERLPPTVRKVVVATNIAETSITINGIVFVLDCAF
VKLRCYNPLTAIESLVVTPISKASASQRAGRGGRNRPGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLFALGGLDQYGRLTEPTGVH
MAEFPLSPMFAKMLLESGNFGCSKEIITIAAMMQIQNVFAVPSNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFVKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARLHHSGSYRTLRDDRELHIHPNSVLYGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQATHGSLGSKRSKVF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccactccatcatgaaattctggaaacccggggccgaggcgccgggagtg
tgtgaggagagggagctgaacacggagctgagcagcaccgctgtcatatacaaccctcac
agttccctgtctgtggagaaacagaggcagaagcttcccgtctttaagcacaggaacaac
atcctgtacatggtggaaagctttcagaccgtagtgatcctgggcgagaccggctcgggg
aagagcacacagattcctcagtacctcctggaggccggatgggccgcagaggggaaggta
atcggcgtgactcagcctcggagagtagctgctacatcggtggccactcgggtagcagag
gaacgtggagcgtttttggggcacgaggtgggatacaccatccgatttgacgattgctca
gaccctcacgcaacccgtataaagttcctcacagatgggatgctggtcagggagatgatg
gctgacccgctgctcaaaaagtacagtgtcctcatgttggacgaggcccatgagaggact
ctctacaccgacatcgccatcggccttctgaagaagattcagaggaagaggagggacctg
cgattaatcgtcgcgtccgctacactggatgccaagaaatttcacgactttttcaacctg
aatgaaacgggagacccgagcaaggacacgtgtgggatcctgacggtcgagggccgcacg
ttccctgtggaggttttctacacagtcagtccggttccagattatgtaaaggccacggtg
gaaaccgtgctgaagattcacgaagccgaggaagacggagatgttctggcgttcctcact
ggacaggacgaggtggagaaggtggtgtccatgctgcaggaccaggctcgctctctgtct
cgccacggcttgaagaaacatctgcgtgtccttcccatgtacgcgggccttccttactcc
gagcagctgaaagtgttcgaaaggttgccacctactgtccgaaaggtggtggtcgccacg
aacatcgccgagacgtccatcaccatcaacggcatcgtgtttgtgctcgactgcgcgttt
gtcaagctgcgctgctacaaccccctcacagccatcgagtctcttgtggtgacgcccatc
tccaaagcctcggcgtctcagagagcgggaagaggcggacgtaaccggcccgggaaatgt
ttccggctttacacggaggaagacttcgagaagcttccggagagcaccgtgcccgagatg
cagcgcagtaatttggctccggttatcctccagctcaaagctctgggcatcgataacgtt
ctgcgcttcagcttcctgtccccgccgccggcgcagaccatggtgcaggcgttggagctg
ctcttcgctctcgggggtctggatcagtacgggcgtctgacggagcccacgggggtccac
atggccgagttccccctcagccccatgttcgccaagatgctgctcgagtcggggaacttc
ggctgctccaaagagatcatcaccatcgccgccatgatgcagatccagaacgtgttcgcc
gtgccgtccaatcagaagaaagccgccgcgcgcgagcacaggaagttcgctgtggccgaa
ggcgatcatctgaccatgctgaatgtctacgaggctttcgtgaagcatcagaagagctct
cagtggtgtcaggagcacttcctgaactataagggtctgctgcgtgccgtgacggtccga
gagcagctccgtcgcctgctgaacaagttcaaggttcctcgaacctccagcgaaggcgac
ccagacgtgattctgaggtgcatcgtgtcgggattctttgctaacgcggcgcgcttgcat
cactccggatcctacaggactttacgggatgaccgggagcttcacattcatcccaactct
gtgctttacggagagaagcctccgaaatgggtggtctttaacgaggtggttcagacctcc
aagtactacatgcgagacgtgactgcggtggaatcgtcctggctggtggaactggcacct
catttttataaacaggccacgcacggctctctgggaagcaaacggtccaaagtcttctga
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