KEGG   Ictalurus furcatus (blue catfish): 128619497
Entry
128619497         CDS       T09387                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04510  Focal adhesion
ifu04512  ECM-receptor interaction
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128619497 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128619497 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128619497 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ifu00535]
    128619497 (col9a3)
Proteoglycans [BR:ifu00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   128619497 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 128619497
NCBI-ProteinID: XP_053499678
LinkDB
Position
15:24829336..24856606
AA seq 663 aa
MAMFSALGFLFLCQLLASSLAQSPGARGPPGPPGLPGKDGTDGPKGKAGIPGKAGKSGLP
GLPGIDGLPGPDGPQGKAGPPGPLGDPGPAGPPGPPGRGRPGAPGLPGANGLPGGVGPQG
PPGPEGLPGLPGLPGPDGPPGLPGALPEGNGDVLCPAICPPGPPGPPGMPGFKGHTGHKG
DKGEFGKDGEKGKQGPPGPPGIPGTVGLQGPRGLRGLPGPLGAIGDRGFPGFRGKPGIPG
VVGKTGDAGEKGPVGFKGPKGEIGKIGPKGLPGPPGLKGEPGMPGRDGKDGTHGFDGEKG
DSGRPGVPGEKGPNGLPGLPGKPGVKGVKGFVGDQGMMGEAGPAGEPGIPGEIGIPGERG
EAGPRGIAGGIGLTGNPGPQGVKGFQGIKGAIGEPGLPGPTGFRGDFGERGPTGASGPKG
EIGMAGSDGLPGENGETGPFGPPGQKGGPGKHGELGPKGVTGPQGETGARGLPGKPGLMG
FHGEPGPPGVAGKTGVSGKLASEQHIRELCGSMINDQIAQLADRLRRPLSPGAVGRPGPA
GPPGNQGEAGAMGLPGAPGPPGYRGLPGDLGDPGPRGDIGEQGDKGPVGKAIDGPVGDQG
EPGLQGVHGIVKDGRDGAPGDPGKPGEPGRAGSTGHQGPPGICDTTACQGTVPHGKSSNP
KNH
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggccatgttctcagctctgggctttcttttcctctgccagcttttggcttcatccctc
gctcagtcacctggagctcgtggaccacctggacctccaggactcccggggaaagatggc
actgatggacctaaagggaaagctggaatcccagggaaggcagggaaatctggactgcct
ggacttcctgggatcgacggtttgccaggtcctgacgggcctcaggggaaggcgggacct
ccgggaccactcggcgatccaggacctgccggaccgcctggacctcctggcagagggaga
cctggagctcctgggctgcctggagctaatggattgccaggtggtgtaggacctcaggga
cccccaggaccagaaggtcttccaggacttccgggtcttccaggtccagacgggccgcct
ggactacccggagcacttcctgagggaaacggagacgtactgtgtcccgctatctgtcca
ccgggacccccggggcctcccggaatgcccggtttcaagggacacactggacacaaagga
gacaaaggagagtttgggaaagatggagagaagggtaaacaaggcccacccgggccccct
ggaatcccaggaactgttggtctacaggggcctcgaggtttgagaggacttccaggtcca
ctgggagccattggcgacagaggttttccaggttttcggggcaagcctggtattcctggg
gtcgttggaaaaacaggtgacgccggagagaaaggacccgtgggctttaaaggacctaaa
ggagaaattggaaaaataggccctaaaggtctgcctggacctccaggcctgaaaggagaa
cctggcatgccaggcagagatggcaaagatggcactcacggattcgatggtgaaaaaggt
gatagtggacggccgggagttcccggagagaaagggcctaacggtttacctggtttgcca
ggaaagcctggagtgaaaggtgtcaaaggatttgttggtgatcaaggaatgatgggagaa
gcaggaccagccggagaaccaggtattcctggtgagattggcattccaggagaaagaggt
gaagcaggacccagaggcatcgctggaggcatcggcctaactggaaatccaggacctcag
ggagtcaaaggattccagggaattaaaggtgctattggagagcctggtcttccgggtcca
accggattcagaggagactttggagagaggggtccaacaggagcttcaggaccgaaaggc
gaaattggaatggctggaagtgacggcttgcctggagagaatggagaaacaggtccattt
ggtcctcctggccaaaaaggagggcctgggaagcatggggagctgggtcctaaaggagta
acagggccacagggggagaccggagcaagagggttacctggaaaacctggtttgatgggc
ttccacggagaaccgggccctcctggtgtcgctggaaagactggtgtatctggaaaactg
gcgagcgaacaacatatcagagaactgtgtggctcaatgatcaatgaccagattgcccag
ctggctgatcgtctgaggaggccgttatctccgggagctgtgggtcgaccgggtccggct
ggacctcctggaaaccaaggagaagcaggagcgatgggacttcctggagctcccggtccg
ccaggatacagaggacttccaggagatcttggagatcctggtcctagaggtgatatcggt
gaacagggtgataaggggcctgttggaaaagccattgatgggccagttggagaccaagga
gaaccaggtctccaaggagtacacggcattgttaaagacggacgcgacggcgcacctgga
gatccaggtaagcccggagaaccgggcagggcgggcagcacggggcatcaaggaccccct
ggaatctgcgacacaacagcctgccagggcacagtgcctcacgggaaatcatccaaccct
aaaaaccattaa

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