Ictalurus furcatus (blue catfish): 128619497
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Entry
128619497 CDS
T09387
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04510
Focal adhesion
ifu04512
ECM-receptor interaction
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128619497 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128619497 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128619497 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128619497 (col9a3)
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Others
128619497 (col9a3)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
128619497
NCBI-ProteinID:
XP_053499678
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All DBs
Position
15:24829336..24856606
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AA seq
663 aa
AA seq
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MAMFSALGFLFLCQLLASSLAQSPGARGPPGPPGLPGKDGTDGPKGKAGIPGKAGKSGLP
GLPGIDGLPGPDGPQGKAGPPGPLGDPGPAGPPGPPGRGRPGAPGLPGANGLPGGVGPQG
PPGPEGLPGLPGLPGPDGPPGLPGALPEGNGDVLCPAICPPGPPGPPGMPGFKGHTGHKG
DKGEFGKDGEKGKQGPPGPPGIPGTVGLQGPRGLRGLPGPLGAIGDRGFPGFRGKPGIPG
VVGKTGDAGEKGPVGFKGPKGEIGKIGPKGLPGPPGLKGEPGMPGRDGKDGTHGFDGEKG
DSGRPGVPGEKGPNGLPGLPGKPGVKGVKGFVGDQGMMGEAGPAGEPGIPGEIGIPGERG
EAGPRGIAGGIGLTGNPGPQGVKGFQGIKGAIGEPGLPGPTGFRGDFGERGPTGASGPKG
EIGMAGSDGLPGENGETGPFGPPGQKGGPGKHGELGPKGVTGPQGETGARGLPGKPGLMG
FHGEPGPPGVAGKTGVSGKLASEQHIRELCGSMINDQIAQLADRLRRPLSPGAVGRPGPA
GPPGNQGEAGAMGLPGAPGPPGYRGLPGDLGDPGPRGDIGEQGDKGPVGKAIDGPVGDQG
EPGLQGVHGIVKDGRDGAPGDPGKPGEPGRAGSTGHQGPPGICDTTACQGTVPHGKSSNP
KNH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttctcagctctgggctttcttttcctctgccagcttttggcttcatccctc
gctcagtcacctggagctcgtggaccacctggacctccaggactcccggggaaagatggc
actgatggacctaaagggaaagctggaatcccagggaaggcagggaaatctggactgcct
ggacttcctgggatcgacggtttgccaggtcctgacgggcctcaggggaaggcgggacct
ccgggaccactcggcgatccaggacctgccggaccgcctggacctcctggcagagggaga
cctggagctcctgggctgcctggagctaatggattgccaggtggtgtaggacctcaggga
cccccaggaccagaaggtcttccaggacttccgggtcttccaggtccagacgggccgcct
ggactacccggagcacttcctgagggaaacggagacgtactgtgtcccgctatctgtcca
ccgggacccccggggcctcccggaatgcccggtttcaagggacacactggacacaaagga
gacaaaggagagtttgggaaagatggagagaagggtaaacaaggcccacccgggccccct
ggaatcccaggaactgttggtctacaggggcctcgaggtttgagaggacttccaggtcca
ctgggagccattggcgacagaggttttccaggttttcggggcaagcctggtattcctggg
gtcgttggaaaaacaggtgacgccggagagaaaggacccgtgggctttaaaggacctaaa
ggagaaattggaaaaataggccctaaaggtctgcctggacctccaggcctgaaaggagaa
cctggcatgccaggcagagatggcaaagatggcactcacggattcgatggtgaaaaaggt
gatagtggacggccgggagttcccggagagaaagggcctaacggtttacctggtttgcca
ggaaagcctggagtgaaaggtgtcaaaggatttgttggtgatcaaggaatgatgggagaa
gcaggaccagccggagaaccaggtattcctggtgagattggcattccaggagaaagaggt
gaagcaggacccagaggcatcgctggaggcatcggcctaactggaaatccaggacctcag
ggagtcaaaggattccagggaattaaaggtgctattggagagcctggtcttccgggtcca
accggattcagaggagactttggagagaggggtccaacaggagcttcaggaccgaaaggc
gaaattggaatggctggaagtgacggcttgcctggagagaatggagaaacaggtccattt
ggtcctcctggccaaaaaggagggcctgggaagcatggggagctgggtcctaaaggagta
acagggccacagggggagaccggagcaagagggttacctggaaaacctggtttgatgggc
ttccacggagaaccgggccctcctggtgtcgctggaaagactggtgtatctggaaaactg
gcgagcgaacaacatatcagagaactgtgtggctcaatgatcaatgaccagattgcccag
ctggctgatcgtctgaggaggccgttatctccgggagctgtgggtcgaccgggtccggct
ggacctcctggaaaccaaggagaagcaggagcgatgggacttcctggagctcccggtccg
ccaggatacagaggacttccaggagatcttggagatcctggtcctagaggtgatatcggt
gaacagggtgataaggggcctgttggaaaagccattgatgggccagttggagaccaagga
gaaccaggtctccaaggagtacacggcattgttaaagacggacgcgacggcgcacctgga
gatccaggtaagcccggagaaccgggcagggcgggcagcacggggcatcaaggaccccct
ggaatctgcgacacaacagcctgccagggcacagtgcctcacgggaaatcatccaaccct
aaaaaccattaa
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