Ictalurus furcatus (blue catfish): 128619537
Help
Entry
128619537 CDS
T09387
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03320
PPAR signaling pathway
ifu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128619537
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128619537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128619537
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ifu03310
]
128619537
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128619537
Nuclear receptors [BR:
ifu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128619537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128619537
NCBI-ProteinID:
XP_053499748
LinkDB
All DBs
Position
15:26979770..26994403
Genome browser
AA seq
497 aa
AA seq
DB search
MDHVLSIKHLEAEPEPHCSLIPGPSLVQLTMCTDGEKFDAWNMSFGLDQLGLDEMTIYGF
DVTFPSKPESSLSASSEDSELASDTDTQRLHSEEESSRCSGLKTPPHTEHSFSYAKLHDD
ASTALLNMACKICGDRASGYHYGVHACEGCKGFFRRTVGLKLKYKHCSRNCRVHKKNRNK
CQFCRFKKCVLAGMSHTAIRFGRTPLAEREKLIMEFHTVVHRLEPESGKQQAIARNLYRS
YLRHFPITKSKAKAILSGKDEENPLFIIHDMKSLMAGEEFLVWKHSSVPALFPVAELELS
MFRRVQYGSAECVRRIAEFAKSIPGFGELELSDQITMLKYSAFEVNIIRLSHFTNKDGVL
MAEGRVFMTREFIKSLRKPFCDMMETKFDFLGKFRALELEECDLVLFITAVILCGDRPGL
VNPKAIEALQDEVLQTLEFQLKVLHPESPHLFAKLLQKMTDLRSLVAEHVRNIHLLKKSE
LDMCLHPLLLEIMQDLY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgtgttgtctataaaacatctggaagctgaacctgaacctcactgcagtctg
attcccggaccttcactcgtccaattaaccatgtgtacggacggagagaagttcgacgcc
tggaacatgagttttggactcgatcagctcggactggacgaaatgacaatatacggtttc
gacgtgacatttccatcaaaacccgagtcctccttgagcgcttccagtgaggattctgaa
ctcgccagtgacacggacactcagcgtctccacagtgaggaggaaagttctaggtgctcg
ggtttgaagactccgcctcatacagaacacagcttctcgtacgccaagctgcacgacgac
gcgagcaccgcgttactaaacatggcgtgtaagatatgtggagatcgagcctcggggtat
cactacggcgtccacgcttgtgaagggtgtaagggtttctttcggagaaccgtgggattg
aagctgaagtataaacactgcagccggaactgtcgagtccacaaaaaaaaccggaacaag
tgtcagttctgccggtttaagaagtgtgttttggcaggaatgtctcacacagccattcgt
tttgggagaacgcctctagccgagcgagagaagctgatcatggagttccacacagtcgtg
catcggctggaaccggagtcaggaaaacaacaagcgatcgccaggaatttataccgttcc
tacctcagacacttcccaataacgaagagcaaagccaaagccattttatcaggaaaagac
gaagaaaacccgctgttcatcatccacgatatgaagtctctgatggctggtgaggagttc
ctggtgtggaagcactcgtctgtgccggctctgttccccgtcgccgagctggagctgtcc
atgttccgccgtgtgcagtacggctcggccgagtgcgtgcgcagaatcgcagagtttgcg
aagagcatcccgggtttcggggagctggagctgagcgatcagatcaccatgctgaagtac
agcgccttcgaggtgaacatcatccgcctgagtcacttcaccaacaaggacggcgtgctg
atggccgagggacgagtcttcatgacccgagagttcatcaagagcctccgcaaaccgttc
tgcgacatgatggagaccaagtttgacttcttgggtaaatttagagcactcgagctggag
gagtgcgacctggtgctcttcatcaccgcagtcatcctgtgtggagatcggccgggtttg
gtgaacccaaaagccatcgaggcgctccaggatgaggttcttcagactctggagttccag
ctgaaggttctccaccccgagtctcctcacctcttcgccaaactgctgcagaagatgacg
gacctgcggtcgctggttgctgaacacgtacgcaacatccacctgctgaagaagagcgag
ctggacatgtgtcttcacccgctcttactggagatcatgcaggacctctactag
DBGET
integrated database retrieval system
