Ictalurus furcatus (blue catfish): 128619849
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Entry
128619849 CDS
T09387
Symbol
tuba1c
Name
(RefSeq) tubulin alpha-1C chain isoform X1
KO
K07374
tubulin alpha
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04145
Phagosome
ifu04210
Apoptosis
ifu04517
IgSF CAM signaling
ifu04530
Tight junction
ifu04540
Gap junction
ifu04814
Motor proteins
ifu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128619849 (tuba1c)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128619849 (tuba1c)
09143 Cell growth and death
04210 Apoptosis
128619849 (tuba1c)
09144 Cellular community - eukaryotes
04530 Tight junction
128619849 (tuba1c)
04540 Gap junction
128619849 (tuba1c)
09142 Cell motility
04814 Motor proteins
128619849 (tuba1c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128619849 (tuba1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128619849 (tuba1c)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128619849 (tuba1c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ifu04812
]
128619849 (tuba1c)
04147 Exosome [BR:
ifu04147
]
128619849 (tuba1c)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128619849 (tuba1c)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128619849 (tuba1c)
Cytoskeleton proteins [BR:
ifu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128619849 (tuba1c)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128619849 (tuba1c)
Exosomal proteins of other body fluids (saliva and urine)
128619849 (tuba1c)
Exosomal proteins of colorectal cancer cells
128619849 (tuba1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128619849
NCBI-ProteinID:
XP_053500303
LinkDB
All DBs
Position
15:complement(4258639..4262190)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggctggtgtccagattggcaatgcatgc
tgggaactctactgtcttgaacacggcatccagccggacggacagatgcccagcgacaag
accattggaggtggagatgattccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggatctggagcccacggtaatagatgaggtccgcact
ggaacataccgccagctgttccaccctgagcagctcatcacaggaaaggaggatgctgcc
aacaactacgctcgcggtcactacactattggcaaggaaattattgatctggtgctggac
aggatccgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tttggtggtggaaccggttctggtttcacctccctgctgatggaacgcctgtctgttgac
tacggtaagaagtccaagctggagttctccatctacccagctccccaggtgtctactgct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactccgactgt
gctttcatggtggacaacgaagccatctatgacatttgccgtagaaacctcgatattgag
cgccctacgtacactaacctgaataggctgattagtcagatcgtgtcctccatcacggcc
tctctccgtttcgatggtgccctcaatgtcgaccttactgaattccagaccaatttggtg
ccctaccctcgtattcatttcccactggccacctatgctccagtgatctctgcagagaag
gcttaccacgagcagctctctgtggctgaaatcacaaatgcctgctttgagccggccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgtggtgcctaaagatgtgaatgctgctatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactgggttcaaggtgggcatcaactaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctcgatcacaagttcgatttgatgtacgcc
aagcgcgcctttgtgcactggtatgttggtgagggtatggaagagggcgagttctctgag
gccagagaggacatggctgccctggagaaagattatgaagaagttggtgtagactctatt
gaaggtgagggagaagaagagggagaggaatactag
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