Ictalurus furcatus (blue catfish): 128619917
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Entry
128619917 CDS
T09387
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128619917 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128619917 (hbs1l)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128619917 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
FliD_N
Motif
Other DBs
NCBI-GeneID:
128619917
NCBI-ProteinID:
XP_053500401
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All DBs
Position
15:complement(22188317..22234740)
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AA seq
673 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDIYGQSVDDDYCISPATAAQFIYSRRDSRQTRQVEPLEEEE
HEEEEEMPTSPTITQTLDPLTQGQLYSCLDQMRTVLGDSVPEPTLREAALKYDCDPHRAL
DSILSAESSSKQTAAPKTQPPPQKVKPRELPETRLESEVVPKVARMTVSGKKQTMGFDVP
SSEENGVSPSVRRGPSPDATAVAAPETPSKAPCVAEETAAPTPPRSTSKNKQQLNIRTEL
EQRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQEAKKAGKASFAYAW
VLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHRDFIPNMITGAAQADVAVLVVDA
SRGEFEAGFEAGGQTREHALLVRSLGVTQLAIAVNKMDQVNWQQSRFQEITSKLGQFLKQ
AGFKESDVYYIPTSGLSGQNLTTRSTEAALTAWYKGPCLLEQIDSFKAPQRSVEKPFRLC
VSDVFKDQGSGFCVTGKIEAGFVQTGDRMLAMPPNETCTVKGITLHDEPLDWAAAGDHVS
LTVTGMDIIKINIGCVFCDPKEPIRACTRFRARILLFNIELPVTKGFPVLLHYQTVSEPA
TIRKLVSVLHKTSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKELGRFMLRYVG
STIAAGVVTEIKD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacaggaatgttcgagggtataattacgatgaagattttgaggatgacgac
atttacgggcaatcggtggacgatgactactgcatctcgcctgctacggctgctcagttc
atttactcgcggcgggactcgcggcagacacggcaggtagagccactggaggaggaagaa
cacgaggaagaggaagagatgccgacgtcgcccaccatcacgcagacgctcgacccgctc
acgcaaggtcagctgtactcgtgtttggaccagatgaggacggtgctgggagactctgtg
cctgagcccacactgagagaggcggctctgaagtacgactgcgatcctcacagagctctc
gactccattctatctgcggaaagcagcagcaagcagacagccgcacccaaaacccaacct
ccaccacagaaagtgaaacctcgtgagcttcccgagactcgtcttgaatccgaggtggtt
cctaaagtggcccggatgaccgtctccggaaagaagcagaccatgggcttcgacgtgccg
agctccgaggagaacggagtcagcccgtccgttcgcagaggtccgagcccagacgcgacg
gcagtagcagctccggagactccgtctaaagcgccgtgtgtggcggaggaaacggcggcc
ccgaccccgccccgctccaccagcaaaaacaaacagcagctcaacatccgcaccgagctg
gagcagaggcagggagggaaaccgctcctcaacctcgtcgtcataggccacgtggatgcg
ggtaagagcacgctcatgggtcatctcttgtacctgttggggaacgtgaataaacgcacc
atgcacaagtatgagcaggaggcgaagaaagctggcaaggcgtctttcgcttacgcctgg
gtgctggacgagaccggagaggagcgagacagaggggtgaccatggatgtgggcatgacc
aagtttgagaccaactccaaagttgtgaccctgatggatgcaccaggccacagagacttt
attcctaacatgatcactggagcagcacaggcagacgtagccgtgttggtggtggacgcc
agtcgaggagagtttgaggccgggtttgaggccggtggtcagaccagggaacacgcgctc
ctcgttcgatctctcggcgtcacacaacttgctatcgctgttaacaagatggaccaggtg
aactggcagcagtcgaggttccaagaaataacttccaaacttggccaatttctcaagcag
gctggtttcaaggagagtgatgtgtattacatccctaccagtggcctttcaggacagaat
ctcaccaccaggagtactgaagcagcgctcacagcctggtacaaaggcccgtgtctactg
gaacagatagattcatttaaagcgcctcagagatcagtggagaagcccttcagactctgc
gtgtcagacgtctttaaagatcagggttctggcttctgtgtgacggggaaaatcgaagct
ggcttcgttcagacaggagaccggatgctggccatgcctcccaacgagacctgcactgtg
aaaggtatcactcttcacgatgagccgttagactgggcagcagccggggaccacgtcagt
ctgaccgtcacagggatggacatcataaagatcaatatcggctgtgtgttctgtgacccc
aaggagcccatcagggcctgcactcgtttccgagccagaatcctgctgtttaacatcgaa
ctgccagtcacaaaaggcttccccgtcctgttgcactaccagacggtgagtgagcctgcc
accatcagaaagctcgtcagtgtattacacaaaaccagcggcgaggttctgaaaaagaaa
ccgaaatgtttgagtaaaggtcagaacgctgtggtggagattcagactcagagacctgtg
gctctggagctctataaggactacaaagaactcgggcgcttcatgctgcgttatgtgggt
tccaccatcgctgctggggtcgtcacagagatcaaagattaa
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