Ictalurus furcatus (blue catfish): 128619975
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Entry
128619975 CDS
T09387
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128619975 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128619975 (rsf1b.1)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
128619975 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
128619975
NCBI-ProteinID:
XP_053500503
LinkDB
All DBs
Position
16:complement(1663884..1678270)
Genome browser
AA seq
1642 aa
AA seq
DB search
MAASAAAAGSSPGLCPSFAVICSFLERYGVLLDLPELSFPQLERYLQETSTVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKMCQEFNTTWAWELEKKGYREMTVECKTGILKYLCECQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRNDLAQILALLKTQIDPTLLVKKDQEEGSSSNSPNSETEENKKKEDDVEVKKDKDLE
EEKSPKTEKDDPLEQIDSVKQEIAVGKEALRDKAAKDDVRSDKPVVVEETASKAVKEEPM
EEDEAFNNTSKSTSEKNGGPLPSEHTREVKKSSDEIQKALKNDQQAKIPLKKREMKRSED
FDTANCGSGGSSIIVRNPAVKEVRTASEENGLSRENLNGNVSPAVAVEGDGKASDDLQIK
QKEPPAISKDQQADAEVKETKKQLADAKQEEGHEEKQKKEEETTDKSQTSTEESMEVEES
AVAKGDQETSPQVEEAAQTTEKSTGSEVIHLQADSEKVDESAEMEVAKDCSKPLDEEAPE
KSSETKPTDQAETENKPKTSKETPNERDTDHERELIKHESGQTDKKNDTASSENADAAKD
DKTQTGTEAPVETERSTSEDSTQQQSTAHEQSELAVQKADEPRMSEETKSPVDETASTTL
KDSALPEGDKNPESGSTKQTEKQERPKEESIPVKENEESEPLNKGKKLPEDSDVSNAKEK
PSSPKENERTEGCEKSAVCEETDTEPAAKESLKSDRDRTSDKTTPDAEGPDSVATQKESA
DQEKQDVLKKSEEPPTRAVSKTEEVVKQDKPMEVTSAYTKDNKVPTDNKDCDAEPEKEAC
SKKGVQDEHPVEESKASTEESSENRKENGEQKSTSEKEANLSGESTEDQNRAKEKTKTGK
GEADDRKELPQEAIRLKIKVPAHRRRAELQREEGKGDSESEASEGRCLRRSPRICRPTAK
LAEIQDRKVEKKQVTPSVEKEKEENEEKDGDENAVQKKPREKKVDQEGQAKPKGRRQRRV
RWSRVRSQRKKKGSEEDDDNENDESSSEEEETEEDDSDEDYQVEKKKRRRNRNRERNSSD
SSTSSSDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC
QHKLLCDKLEEQLQNLDVALKKKERAERRKERLVYVGISVENIITPTQLEAEEEKQEEVV
KEKKEVKKNKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANIT
GHRGKDMSAILQEEGKENGRPKRTNAGQRRKKRRRLNDLDSDSTMDEEESEEEFRLSDSS
EEEEFVASDNDVDSEGEAPLFDDSDFGSDGQGPTTGFLSRRRSTKRWSARPRRRRRPKGY
SDDEELEDTDEDEEEEEMVTEGSSEFSDSDLDMRRRRSHRSQKKQVNYCEATDSDASQGS
ANRDKAKKRRRLSSSESDASFHSMDSDKEDGKSKKQRAVLSEEESRKRRRRLSLKRRRES
EDDDNSSDSDDSEEEERPVRKRVNRIDSDDSDEEEEKKSTEKEAEDTVAKGVSPLDYNLE
LPPTNGQSPMKTLEGFISRPATGMANPALMSQIGLKNSSAPQPVSIGANGLVPQEMAPQD
EDEDDLLGVTDLVDYVCNSEQL
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcagcggcggggtcttctcccgggttgtgcccaagcttcgccgta
atctgctcttttttagagcgttatggagtcctattggatctgcccgagctctcgttcccg
cagctggagcgctatctgcaggaaacgtccacagttcctaagctgctggtggatctccac
gtgaagttgcttcggaaaataggcaagtccgtttctgccgaccgatgggagaaatatctt
gtaaagatgtgccaggagttcaacaccacctgggcatgggaactggagaagaagggatat
cgtgagatgactgtggagtgtaagactggaattctcaagtacttgtgcgagtgccagttc
gacgacaacgtcaagttcaagacggccatcaacgaagaagaccctgataaaatgcgcctc
cagcccatcggcagagacaaagacggcctcatgtactggttccagcttgaccaggatcac
aacgtgagggtgtacgtggaggagcaggatgatttagatggctcatcctggaaatgcatc
gttagaaacagaaacgatttggcccagatccttgcactcctgaagactcagatcgatccc
acactgttggtcaaaaaggatcaggaggaaggttcatctagtaacagcccaaactcagag
actgaagaaaacaagaagaaagaggatgatgtggaggttaagaaagacaaggatctggag
gaagagaagtctcccaaaactgaaaaagatgacccgttagagcaaatcgatagtgtaaag
caggaaatcgcagtgggaaaagaagcactaagagacaaggccgctaaagacgatgtccgg
tctgacaagccggtcgtagtagaggaaaccgctagcaaagcggttaaagaggagcccatg
gaagaagacgaagcgttcaacaacacctccaagtcaacatctgaaaagaacggtggaccg
ctgccttcagaacatacgagggaggtgaagaagtcgtcagacgagatccagaaagctttg
aaaaacgaccaacaggcaaagatccccctgaaaaagcgtgagatgaaacgaagtgaggat
tttgacaccgccaattgtggaagcggcggcagcagtatcatcgtgcgtaacccggctgtg
aaagaagtgcggaccgccagcgaagagaacggattgagccgcgagaacctcaacggtaac
gtctcgcctgctgtagcggtggagggtgacgggaaggcgagtgacgacttgcagataaag
caaaaagaacctccagctatttctaaagatcagcaagcagacgctgaagtcaaggaaaca
aaaaaacagcttgctgacgcaaaacaagaagagggacatgaagaaaagcagaagaaagag
gaggaaacgacggataagagtcaaaccagcacagaggaatccatggaagtggaggaaagt
gcggttgcaaagggggatcaagaaacatcgccacaggtagaagaggcagctcaaacaacc
gaaaagtcaaccggatccgaagtgatccacttgcaagcggattcggaaaaggtcgacgag
tcggccgagatggaagtcgcaaaagattgttcaaaacctctcgacgaggaagcacccgag
aagtcaagtgagacgaaacccacggaccaagctgagaccgagaacaagccaaagacctca
aaagagactcctaatgagagagatacggatcacgagcgagaactaataaaacatgagtcc
ggccagactgataaaaagaacgatacagcctcgagtgagaacgcagatgctgcaaaagac
gacaaaacacagacgggaaccgaggcccccgtggagactgagaggtctacgtcagaagac
tctacacaacagcaaagtacagctcatgaacagagcgaactagctgtccaaaaagcagac
gagcctcgcatgtccgaagaaaccaaaagtcctgttgatgaaacagcatctacaactcta
aaggacagtgccttaccggaaggtgataaaaaccctgaatcaggttctacaaagcagacc
gagaaacaggagcgtcctaaagaggagagcatcccagttaaggaaaacgaagaatctgaa
cctttaaataaaggaaagaaactgcctgaagattccgatgtatccaacgcgaaggaaaaa
ccatcctcgccaaaagaaaacgaacggactgaaggctgtgaaaaatccgccgtgtgtgaa
gagacagatacggaacctgcagccaaagagtctttaaaatcagatcgtgacaggacgtcg
gataaaaccacgccagacgcagaaggacccgattcagttgctacccaaaaagaatcagca
gatcaggagaaacaggatgtcctgaaaaagtcagaggaaccgcctactcgtgcagtatcc
aaaacagaggaagtagtgaagcaggataagccaatggaagtaacttcagcgtacacaaag
gataataaagtacccacagataataaggattgtgatgctgagcctgaaaaggaagcttgc
agtaagaaaggcgtgcaggacgagcatcctgtcgaggagagcaaggcttctacagaagaa
tccagcgagaaccggaaagaaaacggtgaacaaaaaagtacttccgagaaggaggcgaac
ctcagcggtgaatcgacggaagaccagaatcgagcaaaggagaagacgaagacgggtaaa
ggagaagcagacgatcgcaaagaactaccgcaagaagcaatccgtctgaaaatcaaggtc
ccggctcacaggaggcgggcagagctgcagcgagaagagggaaagggtgactcggagtct
gaggcaagcgaagggagatgtctgaggcgctcgccgaggatttgcagaccaacagccaag
ctagcagaaatccaagaccggaaggtggagaagaaacaagtcacgccttcggtcgagaag
gagaaggaggaaaatgaagaaaaggatggggatgaaaatgcagtacaaaaaaagccaaga
gagaagaaggttgatcaagaaggtcaagctaaaccaaaggggagacgccaaaggcgggta
cgatggtccagagtccggtcacaacgcaaaaagaaaggctcggaggaagacgacgacaac
gagaatgacgagagttcaagcgaggaggaggagaccgaggaagacgacagtgatgaggat
taccaggtggagaaaaaaaagagaaggcggaaccgcaacagagagaggaacagctctgat
tcttctacctcgtcttcagacgaccttccgccaaacgatgacccctgcaaacactgtggc
ctgcccaaccatcctgagctgattctgctgtgcgactcgtgcgacagcggttatcacaca
gcgtgtctccgtcctcctctcatgatcatcccggatggtgaatggttctgtccaccatgc
caacataaactgctttgtgacaagctggaagaacagttacagaatctagacgtggcactt
aagaagaaggaacgtgccgagcgaaggaaagagcgtctggtctacgttgggatcagcgtc
gagaatataatcacgcctacccagcttgaagcagaggaagaaaaacaagaagaggtggtg
aaagagaagaaggaggtcaagaaaaacaagtcctggggccgaagatcgacccgggccaaa
aaatatataagctacaggttcgacgagtttgacgaagctatcgaggaggcgatcgaagaa
gatatcaaagaggctgagggaggaggagcaggccgtggtaaggacatggcaaatatcaca
ggccaccgagggaaggacatgtccgccattttgcaggaagaagggaaagaaaatgggcgg
cccaagcgtacaaatgctggacagcggcggaaaaaacggcggcgcctcaacgacctggac
agcgacagcaccatggatgaagaggagagcgaggaagagttccgcctgagcgacagcagt
gaggaggaggagtttgtggcgtcggataacgatgtggacagtgagggagaggcaccgtta
tttgacgacagcgacttcggcagcgacggccaaggaccaactacgggctttttgtccagg
cggaggtcgactaaacggtggagcgcgcgaccacgcaggcgacgcagacccaaagggtac
tccgatgacgaagagctcgaggacaccgatgaagacgaggaggaagaagaaatggtgact
gagggttccagtgagtttagtgacagtgacctggacatgcgcaggcggcgttcccaccgg
agccagaaaaagcaagtcaactattgcgaggcgaccgactcggacgcctcccaaggaagc
gccaacagggacaaggccaagaagcgcaggcgcttatccagctccgaaagcgacgcgagc
ttccactccatggactcggacaaggaagatggaaagagtaaaaagcagagagcggtcctg
tcggaagaggagtctcggaaacggcgcaggcgtctgtcactgaagcgcaggagggagtcc
gaggacgacgacaatagcagcgattcggatgattcggaggaagaagaacggcccgtccgc
aagcgggtgaaccgaatcgattcggacgacagcgacgaggaggaggagaagaagagcaca
gagaaggaggccgaggacaccgtagcgaaaggggtcagccctctagactataacctggaa
cttcctcctactaacggacagagccccatgaaaactctggagggtttcatctcacggcct
gccactggcatggctaaccctgctctcatgagtcagatagggctgaaaaacagcagcgca
ccacaacccgtgtccattggcgccaacggcctggttccccaggagatggcgccgcaggat
gaagacgaggatgaccttttgggggtcacagaccttgtagactatgtctgcaacagtgaa
cagttgtaa
DBGET
integrated database retrieval system
