Ictalurus furcatus (blue catfish): 128619979
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Entry
128619979 CDS
T09387
Name
(RefSeq) tsukushi-like
KO
K08130
tsukushi
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128619979
Proteoglycans [BR:
ifu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
128619979
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_6
LRR_SKP2
LRR_RPS2
LRRNT
LRR_9
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128619979
NCBI-ProteinID:
XP_053500513
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All DBs
Position
16:2751550..2752666
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AA seq
346 aa
AA seq
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MAILLEGRISALLVLFFSTVKTCHPGCRCEEQSFGLFNSFSLMKVDCSGLGPNTIPVSIP
LETSSLDLSSNGIRSIEGAVFSGPGYTTLSSLNLSNNLISSMNGSVFSKLHYLETLDLSW
NSIQNLVEGFPGLPVTEVDLSDNRIHEINLNVFRVQDCGRPLNMDLSYNLIMSVIRNKLS
QPLNIHSLNLAGNELTSVPSLRDISLRFLTLDDNPISVIDEQSFAGLKYLVHLSLSSMPE
LHTVKPQSLHDLQNLQVLDLSENNKLKTLSAEVFRGLKSLQELNLSNCWLTSLPANILQL
LPSIKGIALRDGVNCRRLQRQEQFHRHVGRNKPDAALTCDVTGVIL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctcctggaaggaagaatttctgcacttcttgttctctttttcagcacagtg
aagacgtgccatcccgggtgccggtgtgaggagcagagtttcgggctgttcaacagcttc
agcctgatgaaagtggactgcagtggactgggaccgaatacaattccagtttcaatccct
ttagaaacttcttcgttggatctttcgtcgaatggcatccgttctatcgagggcgccgtc
ttctcgggaccgggatacaccaccctgtccagtctcaacttgagcaacaaccttatctct
tccatgaatggaagcgttttctccaaactgcactatctggagacgctagatctgagctgg
aactccatccagaaccttgtggaaggttttccaggccttcctgtcaccgaggtagatctg
agcgacaaccggattcatgaaatcaacctgaatgtgtttcgagttcaggattgtggaagg
cctctcaacatggatctgtcttataacttgataatgtccgttataaggaataaactttca
caaccgctcaacatacatagccttaatttagcgggaaatgagctcacttccgtgccaagc
ttgcgggacatctctttacgcttcctcaccctggacgataaccccatatcggtcattgat
gaacagagcttcgctggattgaaatatctcgtccacctttctctaagctcgatgcctgag
ttacacaccgtcaaacctcaaagcttacacgatctccaaaacctccaagtgcttgacctt
tcggagaacaataaactaaagacgttgagtgcagaggtttttcgtggccttaaatcactg
caggagctcaatttgtcgaactgctggctcacgtctttgccggccaacatcctccagctc
ctcccgagtattaagggcattgctctgagggacggagtgaactgtcggaggctccagagg
caggaacaatttcacagacacgtcggacggaataaacccgacgcagctctgacctgcgat
gtgactggtgtcattttgtga
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