Ictalurus furcatus (blue catfish): 128620109
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Entry
128620109 CDS
T09387
Symbol
si:ch73-234b20.5
Name
(RefSeq) vesicle-associated membrane protein 8
KO
K08512
vesicle-associated membrane protein 8
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04130
SNARE interactions in vesicular transport
ifu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128620109 (si:ch73-234b20.5)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128620109 (si:ch73-234b20.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128620109 (si:ch73-234b20.5)
Membrane trafficking [BR:
ifu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
128620109 (si:ch73-234b20.5)
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Baculo_11_kDa
DUF2207_C
DUF2976
ODV-E18
VirB8
Integrase_H2C2
SNARE
Prominin
UL45
Motif
Other DBs
NCBI-GeneID:
128620109
NCBI-ProteinID:
XP_053500760
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All DBs
Position
16:19564008..19565966
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AA seq
102 aa
AA seq
DB search
MAEHDTQPQGSSKLNQVQDQVNDVKVILKDNINKVLERGERLDDIMGKTYDLQATADSFQ
RTSARVSRKYWWKNTKMMIIIGVIVFIIVLLIILLATGVIPT
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcatgatacacaaccccaaggctccagtaagcttaatcaagtgcaggaccag
gtaaatgatgtcaaagttatcctcaaagacaacataaacaaagtgttggagaggggagag
agactagatgacataatggggaaaacatatgatctgcaggccactgccgactcatttcaa
aggacttctgcacgggtttccagaaagtattggtggaaaaacaccaaaatgatgattata
atcggagtgattgtgttcatcattgttttgctcatcattcttctggcaaccggagtcatt
cccacataa
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