KEGG   Ictalurus furcatus (blue catfish): 128620234
Entry
128620234         CDS       T09387                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04140  Autophagy - animal
ifu04148  Efferocytosis
ifu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128620234 (vps11)
   04148 Efferocytosis
    128620234 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128620234 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ifu04131]
    128620234 (vps11)
Membrane trafficking [BR:ifu04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    128620234 (vps11)
   Hops complex
    128620234 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin TPR_Vps41 zf-C3HC4_2 zf-rbx1 zf-RING_2 zf-C3HC4 zf-C3H2C3 zf-RING_5 ADIP TPR_GEMI5 zf-ANAPC11 Beta-prop_EML_2 ToxA_N zf-RING-like zf-RING_UBOX Ta1207 zf-C3HC4_3 zf_RING_Vps8_fungal Kbp-5
Other DBs
NCBI-GeneID: 128620234
NCBI-ProteinID: XP_053501013
LinkDB
Position
16:15033179..15043960
AA seq 927 aa
MAAFLQWRRFVFFDKETVKDPSENGANFALPVGISACDAGRGHVVLGDMDGQIWFLSRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNTDKRDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSCPVTGLAFR
QAGKVTHLFVATLEKVQCYTLSMKEYPRVELDIHGCALRCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKILAHWHRGYLLLISRDIKSPNKPDFGSRQLTPSEKQVLTIYD
LDNKFIAYSAAFDDIIDVLAEWGSFYVLTRDGKMFMLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYIKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHSHHEWYLKIQLEDLKNYQEALRYIGRLPFEQAETNMKHYGKTLMHHV
PESTTVLLKRLCTNYQPIQDSTDRDSVDRLAENKASSEEFIPIFANNPRELRAFLEHMIT
VEPDSPQGVYDTLLELRLQDWAHEQDPEKKTTLQRAALLLLRSENTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYSKVVEACKRYGNQEVCLWEQALGYFARKEEDCK
AYISEVLQHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESKQIEEDERKIQQ
YREETAHLRSEIQELSTSAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQEQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLITD
PPGGKPGSGGLEADLQRDLLIHTKRNA
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggctgcgttcttgcagtggagacgattcgtgttttttgataaagaaacggtgaaagat
ccgagcgagaatggagcaaactttgctttaccggttggtatatcagcttgtgatgcaggg
cggggacatgttgttctcggagatatggatggtcaaatttggtttttatcgagatcgttg
cagttgacctccttccaggcttataaactgcgggtaacacacctgtaccagctgaagcaa
cacagcatcctggtgtcagtgggtcaggacgaacatggcattaacccactggtgaaggtg
tggaacacggataagagagacagcggtagtcctctgtgtactcgtatatttccagccatt
cctggaaacaaacctacagaagtgtcctgtctcagtgtacacgagaacctcaacttcatg
gccatcggctttacagacggcagtgtagttttgactaaaggtgacatcaccagagacaga
cacagtaagaccctcaccctgcatgagggaagctgtcctgtcacaggtctggctttccgt
caagcaggaaaagtcacccacttgtttgtggctactcttgagaaagtacagtgttacacg
ttgtctatgaaggagtatcctcgtgtggagctggacatccacggctgtgctttgcgctgc
tctgccctcacggacccctctcaggactcgcagttcattgtagcaggagatgactgtgtg
tatctgtatcaacctgatgaaagaggaccctgctttgcctttgatggacataaaatcctg
gctcactggcaccggggttacttgctgttgatttcccgagacatcaagtcacctaacaag
cctgactttgggtctagacagttgactccatcagaaaagcaggtcttgacgatttatgac
ctggacaacaagttcattgcctacagcgcagcttttgatgacatcatagacgtcctggca
gagtggggctcgttttatgtcctgacaagagatggaaagatgtttatgctgcaggagaag
gacacccagactaagcttgagatgctgtttaagaagaacctgtttgtgatggcgattaac
cttgcaaaaagccagcatctggataatgacggtctttctgagatatttagacagtatgga
gaccatctgtacatcaaaggggaccatgatggcgctatccaacagtatattcgaaccatt
gggaaactggaaccctcatatgtcatccgtaagttcctggatgcacagagaatacacaac
cttactgcatacctgcaggccctccacaggcaatccctggccaatgcagatcacaccacg
ctgctcctcaactgctacaccaaactgaaggacagctccaagctggaagagttcattaag
agcagtgagagcgaggtgcattttgatgtagagatagccatcaaggtgctgcgccaggct
gggtaccatagccacgctgtgttcctggcggagaaacactcccaccatgagtggtacctg
aagattcagctggaggatttaaagaactaccaggaggctctgcgctatattgggcggctg
ccgtttgagcaagccgagactaatatgaagcactatgggaaaactctgatgcaccatgtt
cccgagagcaccactgtgctgctcaagaggctttgtaccaattaccaacccatccaggac
tccactgaccgggacagtgtggacagattagccgagaacaaggccagttcagaagaattt
atccctatctttgctaataatccacgagagctacgagcattccttgagcacatgattacg
gtggaaccagattcaccacaaggtgtgtatgatacactgcttgagctgcgactgcaggac
tgggcccatgaacaggatcctgagaaaaagacaaccctgcagagggcagcattgttgctg
ctgaggagtgaaaacacagtgtttgataaagccctggtgctctgccaaatgcacaacttc
aaagagggagtgctctatctgtatgagaagggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtactctaaagtggtggaggcgtgtaagcgctacggtaatcag
gaagtttgtttgtgggaacaggccttgggctactttgcacgcaaagaagaagactgcaag
gcttacattagcgaggtgctacaacacatagatcagaataaccttatgccaccactgcta
gtggtacagacactcgcccataactccaccgcaacactgtcagtgattaaagattatctg
attaacaaactgcaaagggagagcaagcagattgaagaagatgagaggaaaattcagcag
taccgtgaggagactgcacacctgcgctctgagatccaggaactcagcaccagtgcaaag
attttccagaagacaaagtgcagcatgtgtaacagccctctagagttgccatcagtgcat
ttcctttgtggtcactctttccatcagcactgcttcgagagctacgcagagagtgaggct
gagtgcccaacatgcactcctgaaaacaggaaggtgatggacatgttacgggcacaagag
cagaaacgagacctacatgatcactttaatagacagttgaggagttctaatgacggtttc
tcagtggtggcggattactttggccgtggggttttcaataaactgactctgataacggat
cctcctggaggcaagcctgggtctgggggtttagaagctgatctacagagagacctactc
attcataccaaaagaaatgcctga

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