Ictalurus furcatus (blue catfish): 128620257
Help
Entry
128620257 CDS
T09387
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128620257
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
128620257
Protein recycling
Other Rab GTPase associated proteins
128620257
Endosome - Golgi transport
Rab associated proteins
128620257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
128620257
NCBI-ProteinID:
XP_053501051
LinkDB
All DBs
Position
16:28205560..28283113
Genome browser
AA seq
1064 aa
AA seq
DB search
MDDMASVGKISASSDSVSTLNSEDFVLVSRLGDETPSTNNGSDDEKTGLKVISEEGVSFK
IVGNGSEQQLQRELEDVLMDPSVADVTPGSDHVGGGDLSYPTTAAPRHPCPAPPKLEIVL
PVHGAQQDDGSVMSPGTPLLDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQV
PLDITLSVPGVSEGTVRLLDPQSGTEISNYPIYKILFCVRGHDGTPESDCFAFTESHYNA
EIFRIHVFRCEIQEAVSRILYSFATAFRRSANKASLSAQAPPLTPDSDVFTFTVSLEIKE
DDGKGTFSAVSKDKDRQSFKLRPGMDKKIVIYVQQTSNKELAIERCFGLLLSPGKNVRNS
DMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQAVNEETPKDKFMYMTTAVDLVITEVEE
PVRFLLETRVRVCPPTDRLFWPFSKRSYTETFYLKLRQLERKSNTDTLYEVMSLESETER
EKKKTTASPGILPSASHGSMAPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGDLL
SKWHMNLAVRPKPLPALVRSGVPEALRGEVWQLLAGCHNNDHQVEEYRTLITKESPQDSA
ITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEE
QAFSVLVKIMFDYGLRELFKQNFEDLHCKFFQLERLMQEYIPDLYSHFLSIGLEAHMYAS
QWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALALLKTSKDDLLQADFEGALKFFRV
PVPKRYRSEENAKKLMELACSMKISQKKLKKYEKEYHTMREQQEQQEAPIERYERENRRL
QEANMRLEQENDDLAHELVSSKISLRKDLDNAEEKADALNKELLITKQKLIDSEDEKRRL
EDEAAQLKEMCRRELDKSESEIKKNGSIIGEYKQICSQLSERLEKQQTANRGELEKIRMK
VEGCERCSVLFSKEGRLKALSVPKELNEDENDEEKEALQVQLREMELELAQTKLQLVEAE
CKIQDLDHHLALALSEVQAAKKTWFNRTLTSIKTVTGAQGKETT
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatggcctccgtggggaaaattagtgcctcctctgactcggtgtccaccctg
aacagcgaggactttgtcctggtgtcccgcctcggggacgagaccccgtccactaataac
ggcagtgacgatgaaaaaacaggcctgaaggtgatttctgaggaaggggtcagctttaag
attgtggggaacggcagtgagcagcagttgcagagggagctcgaggatgtgctgatggac
ccatcggtggcagacgtgactcccggatcggaccacgtgggcgggggggatctgagctac
cccaccactgcggccccacgtcatccctgtcccgcacccccaaaactggagatagtcctg
cccgttcatggagctcaacaggatgacggctcggtgatgagtccggggacgccgctgctg
gacgaggacagcgtggtgttcagtaagctgacgtacctgggctgtgcgtcggttaacgcc
ccccgcagtgaggtggaggcactgcgtatgatgagcattctccgcagccagtgccaggtg
ccgcttgacatcaccctctccgtacctggagtatccgagggaaccgtcaggttgttggac
cctcagagcgggaccgagatctctaactaccccatctataagatcctgttctgtgttcgg
ggtcatgacgggacaccagagagcgactgtttcgccttcacagagagccactacaacgcc
gagatcttccgtatccacgtcttccgctgcgagatccaagaagcggtcagcagaatactc
tacagcttcgccacagcctttcggcggtcggccaataaggcgtcgctctcggctcaggct
ccgcccctcacgccggacagcgacgttttcaccttcacagtcagtctggagatcaaagag
gatgatgggaagggcaccttcagtgccgtgtcgaaggacaaggaccgacagagcttcaag
cttcgtcctgggatggacaagaagatcgtcatctacgtccaacagacgtctaacaaagag
ctggccatcgagaggtgttttggtcttctcttaagtccagggaagaatgtgaggaacagt
gacatgcacttgctagacctggagtcgatggggaagagttcagatggtaaatcttacatc
attacagggagctggaatcccaacactcctcaatttcaggctgtcaatgaggagacgcct
aaagataagttcatgtacatgacgacagcggtggatctagtgatcacggaggtggaggag
ccggtgcgcttcctgttggagacgcgtgtgagggtgtgtcctcccactgaccggctcttc
tggccttttagcaagcgcagctacactgagaccttctacttaaaactgcgacagctggag
aggaagagtaacacggacacgctgtacgaggtcatgagtttggagagcgagaccgagaga
gagaagaagaaaacgacggcgagtcccggcatcctgccctccgcttcacacggttccatg
gcgccctcgcctcctgaggatgacgaggaggaagataacgacgagccactgctgagcggt
tctggagatgtgtctaaagagtgcgctgagaagattctggagacgtggggagacctgctg
tccaaatggcacatgaacctggctgtacggcccaaaccgctccccgcgctcgtccgcagc
ggcgtccccgaagccctcagaggggaggtatggcaactcctggctggttgccataacaac
gaccatcaggtggaggagtaccgcacgctcattacaaaggaatcacctcaggacagtgcc
attactcgagacattaaccgcacatttccagcacacgactactttaaggacacaggaggt
gacggtcaggactcgctgtacaagatctgtaaggcctactctgtgtacgacgaagagatc
ggctactgtcagggccagtccttcctggctgccgtgctgctgctacacatgccagaggaa
caggcttttagcgttctggtgaagatcatgtttgactacggtctcagggaactcttcaaa
cagaactttgaagacctacactgcaagttctttcagctggagagactcatgcaggaatac
attccagatttgtactcgcacttcttaagtataggtttggaagctcacatgtacgcctcc
cagtggttcctcacgctctttacagccaagtttcctctctacatggtgtttcacatcatc
gacctgctgctgtgcgagggaatcagtgtcatctttaatgtagctctggctttactcaag
acgtcgaaggatgaccttctgcaggccgactttgagggagctctgaagttcttccgtgtg
cccgtgcccaaacggtaccgctccgaagagaacgccaagaagctcatggagctcgcgtgt
agcatgaagatcagtcaaaagaagctgaagaagtatgagaaagagtatcacacgatgcga
gaacaacaggaacagcaagaggcccccatcgagagatatgagcgggagaaccggcgtctg
caggaagccaacatgcgtctggagcaggagaacgatgatctcgctcacgagctggtcagc
agtaagatctcgctcaggaaggacctggacaacgcggaggagaaggccgacgccctaaac
aaagagctcctcatcacgaaacagaaactgatcgactcggaggatgagaagagacggctg
gaggatgaagcggcgcagcttaaggagatgtgccgcagagagctggacaaatcggagtca
gagatcaaaaagaacggctccatcatcggagaatacaaacagatctgctcccagctgagt
gaacgacttgagaagcagcagacggctaacagaggagagctggagaagatccggatgaag
gtggagggctgtgagaggtgcagcgtgctcttcagtaaagagggccgtctgaaggctctg
agcgttcctaaagagctgaacgaggacgagaacgacgaggagaaagaagctctgcaggtg
cagctcagggagatggagctggaactcgctcagaccaaactgcagctggtggaggccgag
tgcaagatccaggatttggaccaccatttggctctggcgctcagtgaagtgcaagcggct
aaaaagacctggttcaaccgaactctaacctccattaagacggtgacgggagctcagggc
aaagagaccacctaa
DBGET
integrated database retrieval system
