KEGG   Ictalurus furcatus (blue catfish): 128620274
Entry
128620274         CDS       T09387                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ifu03009]
    128620274 (nle1)
Ribosome biogenesis [BR:ifu03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    128620274 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 DSE1_N Beta-prop_Aladin ASA1 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_RIG_2nd CFAP251_N Beta-prop_IFT140_1st NLE Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF12 PAC11 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 TRM82_WD eIF2A Beta-prop_HPS5 Tricorn_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Nup120_160 RMC1_N PD40 Ge1_WD40 Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_NWD2_C WDR54 Cytochrom_D1 FAD_binding_9
Other DBs
NCBI-GeneID: 128620274
NCBI-ProteinID: XP_053501107
LinkDB
Position
16:complement(15509496..15517356)
AA seq 476 aa
MSEDVERMLIQFQDEGGEPLGSPFDVPLNITPDKLQLVCNALLLKEEPVPLLFFVHDAEV
VSSLGACVQTLGVETEQVLPVVYQPQAVFRVRAVARCTSSLEGHTEAVISVAFSPTGKYL
ASGSGDTTVRFWDLTTETPHHTAKGHKHWVLSIAWSPDGKKLASGCKNSQILLWDPVTGQ
QIGKTLTGHTKWITWLCWEPLHLNPECRYLASSSKDGSVRIWDTVLSRCDKILTGHTQSV
TCVKWGGDGLLYTSSQDRTVKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEPA
TATINLQDLTGSLEEIKERALQRYNKVRGEAPERLVSGSDDFTLFLWNPAEEKKPVARMT
GHQALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLTSLRGHVAAVYQVAWSADSRLL
VSGSSDSTLKVWDVKTGKLSVDLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagcgaggacgtggagcgcatgttaatccagtttcaggatgaaggtggcgagcctctt
ggatctccctttgatgtcccgttgaacataaccccagataagctgcagctggtttgtaat
gcgctgctactaaaggaagagccggtgccactgctgttcttcgtgcatgatgctgaggtg
gtgtcatccctgggggcttgtgtgcagactctgggtgtggaaacggagcaggtgctgcca
gtggtgtaccaaccacaggccgtgttccgcgtgagggccgtggctcgctgcaccagttca
ctggagggccacaccgaggccgtcatctcagtggctttcagtcccacagggaaatacctg
gctagcggttctggagatacgactgtgagattttgggatctgaccacagagactcctcat
cacactgccaaaggacacaaacactgggttctgtccatcgcctggtctccagatggcaag
aagttagcctcagggtgtaagaacagtcagattctcctgtgggacccagtaacaggacag
cagataggaaagactctgacaggacacactaaatggatcacttggctgtgttgggagcca
ttgcacttgaaccctgagtgccggtacctggctagctcgtctaaagatggctcggttcga
atatgggacacggtgctgagccgctgcgataagatcctgacgggccacacacagtcagtg
acctgtgttaaatggggaggggatggccttttgtacacttcatcccaggacaggactgtt
aaagtctggagggccaaagatggggttcagtgccggacgttgcagggtcatgctcattgg
gtgaacacgctggccctcagcacagactacgtcctccgtacaggagcctttgagccagcc
actgctaccatcaaccttcaggaccttactggctcgttggaagaaatcaaagagagagca
ttgcagcgatacaacaaagtccgaggtgaggctccggagagattggtgtcaggttctgat
gacttcacactgttcctgtggaatccagcagaagagaagaagcctgtggcccgtatgact
ggacaccaggctctggtcaacgaggtgctcttttcccctgacacacgactgctcgcaagt
gcttctttcgacaagtctatcaagatctgggatggcaggactggcaagtatttaacatca
ctccggggtcacgtggccgctgtatatcaggtagcatggtcagcagacagccgtctgtta
gtgagcgggagcagcgacagcacgctgaaggtgtgggacgtgaagacgggcaaactgagc
gtggatctgcctgggcatgctgacgaggttttcgctgtagattggagtcctgacggtcag
cgagtggccagtggtgggaaagacaaatgtctacggatatggaggaggtag

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