KEGG   Ictalurus furcatus (blue catfish): 128620349
Entry
128620349         CDS       T09387                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128620349 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128620349 (exosc8)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     128620349 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 128620349
NCBI-ProteinID: XP_053501238
LinkDB
Position
16:complement(9817473..9827921)
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNTGSISTADGSALVKIGNTTVIC
GIKAELATPTADAPDKGYIVPNVDLPPLCSSRFRPGPPGEQAQVASQFIADIIDDSNIIK
KEDLCIQKSKLCWVLYCDIMCLDYDGNLLDACIITLLAALKNAQLPKVTINKEMDLPEVD
VQHKTHLQINKHPVASSFAVFDDEVIIVDPTTEEESLATALITAVTDENDQLCAFHKPGG
SSLSAEKLQGCISRAVTRNREINKLIDRVTESIKSTK
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggccggtttcaagacagcagagccactggagtaccacagaagctttttgaaagaa
aactgccggccagatgggagagagctgggagagttcagacctacaacattgaacactggt
tcaataagcactgcagatggctcagcgttggtgaagatcggaaacaccaccgtcatctgt
ggcataaaagcagaactggccacacccacagctgatgcccctgataaaggatatattgtt
ccgaatgtggatctgcctcctctgtgctcatccagatttcgtcccggtccccctggagaa
caggctcaggtggccagccagttcattgcagacatcatcgacgactctaacattataaag
aaagaagatttgtgcatccagaagtcaaagttgtgctgggtcctgtactgtgatatcatg
tgtttagactatgatggaaatttactcgatgcctgcatcataactttactggcagcatta
aagaatgcacaacttcctaaagtcacaattaacaaagagatggatttacctgaggttgat
gtgcagcacaagacacatctgcagattaacaagcacccggttgcctcatcattcgcagta
tttgatgatgaagtgattatagtggacccaacaacagaagaggaaagtctggctacagca
ttaataaccgcagtcacagatgagaacgatcagctctgtgctttccataaaccaggggga
agttccctatcagcagagaagctgcagggctgcataagtcgagctgtgacccgaaatcga
gagatcaacaaactcatagacagagtcactgagagcataaagtcgacaaaataa

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