Ictalurus furcatus (blue catfish): 128620349
Help
Entry
128620349 CDS
T09387
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128620349 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128620349 (exosc8)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128620349 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128620349
NCBI-ProteinID:
XP_053501238
LinkDB
All DBs
Position
16:complement(9817473..9827921)
Genome browser
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNTGSISTADGSALVKIGNTTVIC
GIKAELATPTADAPDKGYIVPNVDLPPLCSSRFRPGPPGEQAQVASQFIADIIDDSNIIK
KEDLCIQKSKLCWVLYCDIMCLDYDGNLLDACIITLLAALKNAQLPKVTINKEMDLPEVD
VQHKTHLQINKHPVASSFAVFDDEVIIVDPTTEEESLATALITAVTDENDQLCAFHKPGG
SSLSAEKLQGCISRAVTRNREINKLIDRVTESIKSTK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtttcaagacagcagagccactggagtaccacagaagctttttgaaagaa
aactgccggccagatgggagagagctgggagagttcagacctacaacattgaacactggt
tcaataagcactgcagatggctcagcgttggtgaagatcggaaacaccaccgtcatctgt
ggcataaaagcagaactggccacacccacagctgatgcccctgataaaggatatattgtt
ccgaatgtggatctgcctcctctgtgctcatccagatttcgtcccggtccccctggagaa
caggctcaggtggccagccagttcattgcagacatcatcgacgactctaacattataaag
aaagaagatttgtgcatccagaagtcaaagttgtgctgggtcctgtactgtgatatcatg
tgtttagactatgatggaaatttactcgatgcctgcatcataactttactggcagcatta
aagaatgcacaacttcctaaagtcacaattaacaaagagatggatttacctgaggttgat
gtgcagcacaagacacatctgcagattaacaagcacccggttgcctcatcattcgcagta
tttgatgatgaagtgattatagtggacccaacaacagaagaggaaagtctggctacagca
ttaataaccgcagtcacagatgagaacgatcagctctgtgctttccataaaccaggggga
agttccctatcagcagagaagctgcagggctgcataagtcgagctgtgacccgaaatcga
gagatcaacaaactcatagacagagtcactgagagcataaagtcgacaaaataa
DBGET
integrated database retrieval system