Ictalurus furcatus (blue catfish): 128620353 Help Entry 128620353         CDS       T09387                                  Symbol hmgb1a Name (RefSeq) high mobility group protein B1a   KO K10802   high mobility group protein B1 Organism ifu  Ictalurus furcatus (blue catfish) Pathway ifu03410   Base excision repair ifu04140   Autophagy - animal ifu04217   Necroptosis Brite KEGG Orthology (KO) [BR:ifu00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     128620353 (hmgb1a)  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     128620353 (hmgb1a)   09143 Cell growth and death    04217 Necroptosis     128620353 (hmgb1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ifu03036]     128620353 (hmgb1a)    03400 DNA repair and recombination proteins [BR:ifu03400]     128620353 (hmgb1a)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ifu04147]     128620353 (hmgb1a) Chromosome and associated proteins [BR:ifu03036]  Eukaryotic type   Nucleosome assembly factors    HMG (high mobility group) proteins     128620353 (hmgb1a) DNA repair and recombination proteins [BR:ifu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      128620353 (hmgb1a)    MMR (mismatch excision repair)     Other MMR factors      128620353 (hmgb1a) Exosome [BR:ifu04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    128620353 (hmgb1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36 Ets GP67 Motif Other DBs NCBI-GeneID:  128620353 NCBI-ProteinID:  XP_053501246 LinkDB All DBs Position 16:complement(9493825..9498055) Genome browser AA seq 202 aa AA seqDB search MGKDPAKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFE DMARLDKARYEREMKNYVPPRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS IGDVAKKLGEMWNKTSAEEKQPYEKKAAKLKEKYEKDIAAYRKGKVVGGAAKAPTKPDKA EDDEDEDDDDDDEDDDEDEDDE NT seq 609 nt NT seq  +upstreamnt  +downstreamnt atggggaaagacccagcaaaaccaagaggcaaaatgtcctcttatgcctattttgtacag acctgtagagaggaacataagaagaaacaccctgacacatcagtcaacttctcagagttc tctaaaaagtgctctgagcggtggaagactatgtcagccaaggaaaagggcaagtttgaa gatatggccagacttgacaaggcacgttatgagagagagatgaagaactatgttcctccc agaggtgaaaaaaagaagaggtttaaggaccccaatgctcccaagagacccccgtcagcc tttttcattttctgtgcggaatatcggcccaaggtgaaagaggagaccccaggtctgtct attggagatgtggccaagaagcttggagagatgtggaacaagacctctgctgaagagaag cagccttatgagaagaaggcagccaagctgaaggagaaatatgagaaggacattgcagca tatcgaaagggaaaagttgtagggggtgctgccaaagcccccaccaagccagacaaagcc gaggatgatgaggatgaagatgatgatgatgatgatgaagatgatgatgaggatgaggat gatgagtaa

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