Ictalurus furcatus (blue catfish): 128620361
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Entry
128620361 CDS
T09387
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128620361 (smarcad1b)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128620361 (smarcad1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
128620361
NCBI-ProteinID:
XP_053501257
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All DBs
Position
16:23719040..23740390
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AA seq
922 aa
AA seq
DB search
MRNKEPEILADCTDNTIPETPEAKRPCKPGAAKASDPVLVDSSSDSDVEISGISMGPRKI
TATSTQDTILFSDEEDEVTEVKMETSHHEGRETKLEHPSSLKTSGNGDTVGKRRQEEMCD
DSQESNKSSKKRRESLTDDSADEGPEPSWKEQESMVKKLQRNFPHLNKEELRDVLHEHSW
VIEDALEALRMFSEHVVEFSSDDSDSEPPPSPEHKNTYPTPIPSTSATQQVPHRPLNGDR
DTRMRRRRHTKEIQKRDSSSEDDASDFEASPRPLDLDSDSDETDEKLPKLKAEILGFFQK
ATVDELTLIAGCSLKKAQKIIELRPYKMWNDLDDVLHRGNGLSAELLTGCREVLREREVV
QGLMVRCEDISRKMAEWVQKGLGSMTQPHILNSTFELKPYQLIGLSWLTLLHKNQLSGIL
ADEMGLGKTIQVISFLAHLYQEGNRGPHLITVPSSTLDNWVRELNLWCPSLKVLVYYGSV
EERKCIRYEILNEEVDYNIIVSTYNLAIGNSNDRSLFRKLKLEYAVFDEGHMLKNMSSLR
YRHLMGINAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSS
FEKDRIAHAKLIMKPFILRRIKSEVLKQLPAKEEQIEFCAMSERQQQLYDALFSKLKCSS
NTEKRELTNVMMQLRKMANHPLLHRQYYSSSLLSAMSRLMLKEPSHRDSDPVLIEEDMAV
MSDFELHRLCLQYPALQEHQLTTEQLLDSGKLHLLTPLLTDLKEQGHRVALFSQFTMMLD
ILEVLLKHHKHRYIRMDGSTPMSDRIVLIDQFNTDLDIFVFLLSTRAGGLGINLTSANVV
ILHDIDCNPYNDKQAEDRCHRVGQTRNVKVMKLISKDSIEDAMLRIGQRKLKLEQDMTAT
EEGDEDTIPDDMASLLKASLGL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaaagaacccgaaattcttgcggattgtaccgacaacacaataccagaaact
cctgaggccaagcgtccgtgtaaacccggtgctgccaaagcctccgatcctgtactggtg
gactcgtcctccgattcggatgtggagatatcagggatctcaatggggccgaggaagatt
actgcgacgtcgactcaggacacgatcttgttctctgacgaagaggacgaagtaacagag
gtgaagatggagacgtcgcaccacgaaggacgggagaccaaacttgaacatccttcatcg
ttgaagacgtctggaaacggagatacagtgggtaaaaggaggcaggaggagatgtgtgac
gattcccaggagagtaacaagagtagcaagaagaggcgcgagtcactgacggatgattcg
gcagatgagggacctgagcccagttggaaggagcaggagagcatggtgaagaagctgcag
cgtaatttcccccatctcaacaaggaggagctcagggacgtgcttcatgaacacagctgg
gtcatcgaggacgccctggaggcactgcgcatgttctctgagcacgtggtggagttcagc
agcgatgactcggactcagaaccgcctccatctcccgaacacaaaaacacatatccgact
ccgatccccagcacgtccgcaacgcagcaggtaccccacagacccctaaacggagaccga
gacacacggatgaggaggagacggcacacgaaagaaatccagaagcgagacagcagctca
gaagacgacgctagcgacttcgaggcgtcacccagacccttagacttggactccgattcg
gatgagaccgacgagaagcttcctaaactaaaggctgagatcctgggcttcttccagaag
gccacggtcgacgagctgacgctgatcgctggctgctctctgaagaaggctcagaaaatc
atcgagctgagaccgtataaaatgtggaacgatctggacgacgtcctgcacagaggtaac
ggcctctctgcggagctgctcaccgggtgtcgggaggtcctgcgggagagagaggtggta
caggggctcatggtcaggtgtgaggacatttctagaaagatggccgaatgggtgcagaag
ggactgggatctatgacgcagccacacatccttaacagcacgttcgagctgaaaccgtac
cagttgattggcctcagctggctgaccttgcttcacaagaaccagctgagtgggatcctg
gcagatgagatgggtttggggaagaccatccaagtcatctcgtttctggcacacttgtat
caggaggggaaccgagggccgcatctcatcaccgtgccttcatccacactcgataactgg
gttcgagagctgaacctctggtgcccgagcttaaaagtgctggtttactacggttctgtc
gaggaacgcaagtgcatccgctacgagatcctgaacgaagaggtggactataacatcatc
gtctcaacatataacctggccattgggaactccaacgatcgcagcctgttccgtaagctc
aagctggaatacgccgtgtttgatgaaggacacatgctgaagaacatgagctcgctgcgc
tatcgccacctaatgggcatcaatgccaaatatcggctgctgctgactggaacgccgctg
cagaataacctactagagctgatgtctctgcttaacttcatcatgcccaacatgttctcc
agcagcacctcgcagatcgccaagatgttctccatgaaatcctcagaggagcagagcagc
tttgagaaggaccggattgctcacgccaaactcatcatgaagccgttcatcctgcggcgt
atcaaaagcgaggtcctgaagcagctgcctgccaaggaggagcagatcgagttctgcgcc
atgagcgagagacaacagcagctttatgacgcgctgttcagcaagctgaagtgctccagc
aacacagagaaacgggaactgaccaatgtcatgatgcagctgaggaagatggccaatcac
ccgctcctgcaccgacagtattactccagcagtctcctctcggccatgagcagactcatg
ctcaaggagccgagtcaccgcgactcggacccggttctgatcgaggaagacatggcggtg
atgtcagacttcgagctgcatcgtctgtgcctgcagtaccctgcgctacaggagcatcag
ctgaccacagagcaactgctggactcggggaagctccacctcctcacaccccttctgacg
gacctcaaagaacagggtcaccgagtggccctcttcagccagttcaccatgatgctggac
atcctggaggtgctgctcaaacaccacaagcacaggtacatccgaatggacggctccacg
ccaatgagtgaccggatcgtgctgatcgaccagttcaacacggacctcgacatctttgtg
ttcctgctgtccactagagctggaggactcggcatcaacctgacctccgcgaacgtcgtc
atcctgcacgacatcgactgcaatccgtacaacgacaagcaggcagaggaccggtgtcac
cgcgtaggacaaaccaggaatgttaaggtgatgaagctgataagcaaagactctatagag
gacgccatgctccgcatcggccagaggaaactcaaactagagcaggacatgaccgccact
gaagaaggtgacgaggacaccattccggatgatatggcctctctcctgaaagcttcattg
ggactctga
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