Ictalurus furcatus (blue catfish): 128620415
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Entry
128620415 CDS
T09387
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128620415 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128620415 (sh3rf1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128620415 (sh3rf1)
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128620415 (sh3rf1)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128620415 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128620415
NCBI-ProteinID:
XP_053501366
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All DBs
Position
2:complement(6115192..6166305)
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AA seq
872 aa
AA seq
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MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGV
DELPSNILLVRLLDGIKQRPWRAGTGCTNGLAGGGVREHANPGAQPQRAQTKSTAVRGVP
QLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEVGGVHGFFPASFVQVIKPL
PQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDQNWAEGMLGDKIGIFPISYV
EFNSAARQLIELDKVPDDSAEGTSSSSSSSSSSSGPQANGSQKATGEKKNSKKRHSFTSL
TMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSSSAPSQVHICTTGLIV
TPPPSSPVTTATVFTFPPETSYASIPVDTLPPPPPPPPQSSSMGAASSLAAGQRPSPTAS
DQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGN
YMSPVSRTVASNSQPKVPLGMCSQAGRGVTIVSSSSSPIGAALGGVDPNKPLPICTGPAP
SSPIPAAVVTAAHMPPGQHPKVLMHVTSQMMVNQARNAVRTAVCHNQDRPTAAVTPIQSQ
NAMAFLPHLAVCPQPSPGSVSSSNPTSSRMGVSMGCAAASLTPPNISAASLEVDGMRPVA
MVSLPVAPGNAKPLGATAANQAPACKLDKDCKREKKGLLKLLSNKKKLRLSPPSSPTLEA
EQAVATADMPQGAMAPEMPVPNPTAVASGNHCRTGACPLEAETPAPSSSSSSSSSNVDAA
RRSGCQENSAPIAPPPRQPCSSLLSMQHDGRPIVCERYRVVVSYPPQSEAELELKEGDIV
FVHKKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcggccctgctggatctgcttgagtgcccggtgtgcctagaacggctggac
gccaccgccaaggtcctgccgtgccagcatacgttctgccgccgctgcctgctcggcatc
gtgggatcgcgtggcgagctgcgatgccctgaatgtcgcacgctcgtggagagcggcgtg
gacgagttgcccagcaacatcctcctcgtgcgcttgctcgacggcatcaagcaacgaccc
tggcgagcaggcacgggttgtaccaatggcttggctggcgggggggttagagagcatgca
aacccaggagcgcagccccaaagagctcagaccaaaagcactgcggtcaggggagtcccc
cagcttccctgtgccaaggccttgtacaactacgatggcaaggaacccggcgacctcaag
ttcagcaagggcgacatcatcatcctgcgccggcaggtggacgagaactggtaccacggc
gaagtgggcggcgtgcacggcttcttcccggccagcttcgtgcaggtgatcaagccactc
ccacagccgccgccacagtgcaaggccctgtacgactttgagctgaaggacaaggaggct
gacaaggactgccttcccttctcaaaggacgacattctgacagttattcgacgagtggac
cagaactgggctgagggaatgctgggagataaaatcggcatcttccccatatcctacgtt
gagtttaactcggctgcacggcagctcatcgagctcgacaaggtgccagacgactctgcc
gagggtacttcctcctcctcttcctcttcctcctcctcctcaggcccccaagccaacggc
tcacaaaaagcgacaggggagaaaaagaacagcaagaagcgccactcgttcacctcactg
accatgtcccataaaccgtgcctagccccgccgccgcagcgccactccatggagatcagc
gggcccgtgctcatcagctcctcgaaccctacagcggccgcacgcatcggagagctcagc
gggggtttgtcctccagcgccccctcccaggttcacatttgcacaaccggcctcatcgtc
actccacctccgagcagtcctgtaacaacggcgacggtcttcacttttcctccggagacc
agctatgcctccatcccagtggacacgttgcctcctcctccacctcctcccccacaatct
tcttctatgggcgctgcgtcatcgttggccgcagggcagaggccgtccccgactgcaagc
gaccagagcggacgccagagaccgactgtgtacgttgcgatgttcccatatacaccgcgt
aaggaggatgagctggagctgagaaagggcgagatgttcctggtgctggagcgctgtcag
gacggctggtttaaaggaacgtccatgcacactggcaagatcggagtttttcccggcaac
tacatgagtcctgtcagcagaacggtggcgagtaacagtcagcccaaagtgccgttagga
atgtgctcgcaggctggacgcggcgtcaccatagttagctcctcgtcctctccgatcgga
gctgccctgggtggcgttgaccccaacaagccccttcctatttgcacaggtccagcccct
tcaagccccattccggcagctgtagtgacagcagctcacatgcctcctggtcaacatccc
aaagtgctcatgcatgtgacgtcacagatgatggtgaaccaggcacgtaacgctgtgagg
accgcggtgtgccacaatcaggaccgccccactgcagccgtaacgcccatccaatcccag
aatgccatggctttcctgcctcacctggctgtctgtccgcagccatcacctggcagcgtc
tcctcctcgaaccctacgtcaagcagaatgggagtgtctatgggctgcgccgccgcctca
cttaccccacccaacatcagtgctgcttctttggaggtcgatggcatgagacccgtcgcc
atggtgtcgctcccggtcgctcctggtaacgccaagcctctcggtgcaaccgcagcgaat
caggctcctgcttgtaaactagacaaggactgcaagagagagaagaaaggcctgttgaag
ctgttgtcaaataaaaagaaactccgcctttctcccccatcttccccgactctggaggcg
gagcaagccgttgccacggcagacatgccgcaaggagccatggcacctgaaatgcccgtg
cccaacccaacagcggtggccagtggaaaccactgtcggaccggggcttgtcctttggaa
gctgagacacctgcaccttcatcatcatcatcatcatcatcatcaaatgttgatgctgca
cgcaggagtggctgtcaggaaaactccgcccccattgcaccgccaccacggcaaccgtgc
tcctctctcctgtccatgcagcatgatggacggccaatagtgtgcgagaggtaccgcgtg
gtggtgtcttaccctccacagagcgaggctgagctggagctgaaggaaggcgacatcgtg
tttgtgcacaagaagcgcgaggacggctggttcaaaggcacgctccagaggaacggccga
acgggcctctttcccggcagcttcgtcgacagcatctga
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