Ictalurus furcatus (blue catfish): 128620437
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Entry
128620437 CDS
T09387
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03030
DNA replication
ifu03410
Base excision repair
ifu03420
Nucleotide excision repair
ifu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128620437 (rfc3)
03410 Base excision repair
128620437 (rfc3)
03420 Nucleotide excision repair
128620437 (rfc3)
03430 Mismatch repair
128620437 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ifu03032
]
128620437 (rfc3)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128620437 (rfc3)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128620437 (rfc3)
DNA replication proteins [BR:
ifu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128620437 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
128620437 (rfc3)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128620437 (rfc3)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128620437 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
128620437 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
ABC_tran
Motif
Other DBs
NCBI-GeneID:
128620437
NCBI-ProteinID:
XP_053501407
LinkDB
All DBs
Position
16:10358810..10371471
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANQLKSLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMGTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSTEEVCSVLMSVCKKEGLILPTELAKRIAEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVNQQSPQRLLEVRARLYELLTHCIPAEIIMKGLVCELL
SNCDGHLKPEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgataagtacagaccaacgtctctggcgaagctggactatcacaaa
gaacaagcaaatcagctcaaaagtctggtacaatgtggtgatttcccgcacctgcttgtt
tatggtccatcgggcgctggcaaaaagacccgaattatgtgtctcctccgtgagctgtat
ggtgctggggtggagaagctccggattgaacaccagtccattgtagctccatctaaaaaa
aagattgaaatcaacacaattgcaagtaactaccatttggaggtgaatccaagtgatgca
gggaacagtgaccgtgtcgtcatccaagagctaatcaaaacagtggctcagtcacagcag
atacaatccagcacgcagagagagttcaaagtggttcttctgacggaggtggaccggctc
accaaagacgcgcaacatgccctgcgccgtaccatggagaagtacatgggcacctgtcgc
ctcatcctgtgctgcaactccacctctaaagtgatttctcccatcaggagcaggtgcctg
gctgtaagagtgccactgccaagcactgaggaggtgtgcagtgttctgatgagtgtgtgc
aaaaaggaagggcttattctcccaactgagctggccaaacggatcgccgagaagtcaggc
cgcaaccttcgcaaagctcttctcatgtgtgaggcctgtcgagtgcaacagtatcctttt
tctgcagatcaggacatccctgaaacagactgggaagtgtacctcagagagacggctaac
gccatcgtcaaccagcagagcccacaaagacttttggaggttcgggcaagactttatgaa
ctattaactcactgtattccagcagaaatcatcatgaaggggcttgtgtgtgagctgctc
agtaactgtgatggccatctaaaacctgaggtggcacaaatggcagcctattatgaacac
agactacagttgggcagcaaagccatttaccacctggaggccttcgtggcaaagttcatg
gccatctataagaagtttatggaggatggactcgacaacttcatgttctga
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