Ictalurus furcatus (blue catfish): 128620447
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Entry
128620447 CDS
T09387
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03272
Virion - Hepatitis viruses
ifu04145
Phagosome
ifu04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128620447 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128620447 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
128620447 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128620447 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128620447 (scarb1)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
128620447 (scarb1)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128620447 (scarb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
FtsX
DUF5392
PorA
Motif
Other DBs
NCBI-GeneID:
128620447
NCBI-ProteinID:
XP_053501440
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Position
16:complement(7543853..7568750)
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AA seq
526 aa
AA seq
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MAMSKSNLAIGLSVFGLLAVVFGTVLVFVGPVVIHDQIIKNVEINPQNNLSYTMWKDIPV
PFFMSVYFFNVLNPDEILTGEKPTVEQRGPYVYSEKRWKDNITFHDNKTVSYREYRQYFF
EESMSVGNESDIVTIPNMLVLGASVMLENLPLPLRKMISFTFQSFKEGAFVTKTVGELMW
GYESKLLDFLNTLLPGIMPFKGKFGLFVEFNNSNTGLFTIFTGQDDIRIVHKVDSWNGLK
KVNYWKSEQCNMINGTAGQMWPPFMTTESTLPFYSPDACRSMELVYKRPGTSQGISVYHF
VAPKTLFANGSDYLPNEGFCPCRQSGLLDVSTCRHNSPVFISHPHFYNGDPALLQTVNGL
SPSEHDHALFIDIHPDTGIPMNVSIKLQLNLLMKQVSGITQTGKITEVVMPLLWFAESGY
IDGPVLSMFRMNLVILPMVMEYMQYTFIGLGLGCIIGAMALQLSKKMDKKQGTFGVTEDK
EIKMRIFQACADVNPRYLDNEKTPLVQNIKYYSASSAFKALTFFKS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcaaagtctaacctagcaataggactttcagttttcggacttttagcggtt
gttttcgggactgttctcgtgtttgtgggaccagttgttatccacgatcaaataataaag
aatgtagaaatcaacccccaaaataatctctcctacactatgtggaaagacattcctgta
ccattcttcatgtccgtatattttttcaatgtcctcaaccctgacgagatattgacagga
gagaagcccacagttgagcaaagaggtccatatgtgtacagtgagaagcgttggaaagac
aatatcactttccatgacaacaaaactgtgtcttatcgtgaatatcggcagtatttcttt
gaggagagcatgtctgtaggcaatgaatccgatatagtcaccatcccaaacatgctggtg
ctgggagcatcagtgatgctggagaacttgccccttccattgcggaaaatgataagtttc
accttccaaagttttaaggagggtgcctttgtgacaaaaactgtaggcgagcttatgtgg
ggctacgaaagcaagttgctggactttcttaacacgttactccctggtattatgccattt
aaagggaagtttggactatttgttgagtttaacaactccaacactgggttgtttactatc
ttcacgggtcaggatgacatcaggatagttcacaaagtggattcctggaatggtttgaag
aaagtaaactactggaaatcagagcagtgtaacatgatcaatggtacagcagggcaaatg
tggccaccattcatgactacagaatccactctgccattttacagtccagatgcctgcagg
tcaatggagctggtgtataagagaccaggaacttctcaaggaatctctgtgtatcatttt
gtggctccaaaaacactctttgccaatggctcggattatcttccaaatgaaggcttctgt
ccatgcagacagtcaggtcttcttgatgttagcacttgcaggcacaactcccctgtgttc
atttcccatccacatttctacaatggtgatcctgcccttttgcagactgtcaatggactt
agccccagtgagcatgaccatgcgctcttcattgatatacatccagacactggtatacct
atgaatgtgtctatcaagctgcagcttaacttgttaatgaagcaggtatcaggaataaca
caaactggtaaaataactgaagtagtgatgcccttgctttggtttgctgagagtggatac
attgatggacctgtgctcagcatgttccgtatgaaccttgtaattttacctatggtgatg
gagtatatgcagtacactttcattggacttggactggggtgtatcataggagcaatggct
ctgcaacttagtaagaagatggacaaaaagcaaggaacatttggagtcacagaagacaag
gagatcaaaatgaggatttttcaggcctgtgcagatgtgaacccaagatatttggacaat
gaaaaaactccattggtacagaacatcaagtattacagtgcttcctctgctttcaaagca
ctgacattctttaaatcctaa
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