Ictalurus furcatus (blue catfish): 128620500
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Entry
128620500 CDS
T09387
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128620500 (vldlr)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128620500 (vldlr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
SGL
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
128620500
NCBI-ProteinID:
XP_053501528
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All DBs
Position
16:21123062..21146487
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AA seq
876 aa
AA seq
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MVLCVLGFLLLPLCLQMVGFTHGSRIECEPSQFQCGNGRCIPSVWQCDGDVDCTDGSDEN
TCVRKTCEEQDFVCRNGQCVPKRWHCDGEPDCEDGSDESIDVCHTRTCRTNEFSCGTGST
LCIPVSWKCDGERDCDNGEDETSCSNITCSPLEFTCASGRCVSQNFVCNGEDDCSDGTDE
LDCTPSSCGPNQFQCGNATCIPIGWVCDNDVDCQDQSDELPVRCGRNPTLPAKCSASETQ
CSSGECIHRKWRCDGDADCKDGSDERNCPPRSCRPDQFKCDDGSCIHGSRQCNGFRDCAD
GTDEDNCKNLTQCSGPDKYKCRSGECIEMSKVCNKVRDCTDWSDEPIKECNVNECLLNNG
GCSHLCRDLVVGYECYCTPGLQLLDHKTCGDINECLNPGICSQICINLKGGYKCECHEGY
QMDSSTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFSHQKIFW
ADLGQKAIFSTVLDKRDDVSRHTKVIDVQMPVGIAVDWIYKNIYWSDLGSKTIAVTNFNG
TKQKVLFDRDLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVETDIQWPNG
ITLDLIKSRLYWVDSKLHTLCSVDLNGDNRKKVLQSQDYLAHPFALTVFEDRVFWTDGES
EAIYGANKFTGSDVILLVNNLNEPQDIIVYHELVQLSGINWCNEKVENGGCSYMCLPAPQ
INKHSPKYTCVCPEGQELASDGLQCRPVASTAVPQDEGRVLIHPTHRPDTPKPKVAMQSM
PTERNLSTSIHEVKSAKGSAAAWAALPVLLLAMTAVGGYIMWRNWQMKNKKSMNFDNPVY
LKTTEEDLNIDINRQTASVGHTYPAISIVNTEDDMP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgtgcgttctggggtttcttctcctgccactatgtctccagatggtcgggttt
acacatggctcgcgaatagaatgtgagccatcacaattccaatgtgggaacggacgctgc
atcccatccgtgtggcaatgtgacggtgatgtggactgcactgatggaagcgatgagaac
acgtgtgtgaggaagacatgcgaggaacaggactttgtctgccgcaacggccagtgtgtc
cccaagaggtggcactgcgatggagaacctgactgcgaagacggctcggacgagagcatt
gacgtgtgtcacaccagaacttgccgtacgaatgagtttagctgtggcacaggctccaca
ttgtgcattcctgtctcttggaaatgtgacggcgagagagactgtgacaacggagaagac
gagacgagctgcagtaacatcacctgctctcctctggaattcacctgtgccagtggtcgt
tgtgtctcccagaactttgtgtgtaatggtgaggatgactgcagtgatggtactgatgaa
ctggactgcactccctcctcctgcggccctaaccagtttcagtgtggcaacgcaacgtgt
attcctattggttgggtgtgtgacaatgatgtagactgtcaggaccaatcggatgaattg
cctgtgcgctgtgggaggaaccctacgctgccggcgaaatgctcagctagtgagactcag
tgcagctcaggagagtgtattcaccgcaagtggcgctgtgatggagacgctgactgcaaa
gatggcagcgatgagagaaactgcccgcctcgctcctgtcgcccggaccaatttaagtgt
gacgatggcagctgtatccatggcagccggcagtgcaacggtttccgagactgtgctgat
ggcacggatgaagacaactgcaaaaacctgactcagtgtagcggcccagacaagtacaag
tgtcggagtggagagtgtattgaaatgagcaaagtctgtaacaaggtccgtgactgcact
gactggagcgatgaaccgataaaagaatgcaatgtaaacgagtgccttctcaacaacggt
ggatgctcacacctgtgccgcgacttggtggtcggctacgaatgttactgcacgcctggg
ttgcagctcctcgatcataaaacctgtggggatatcaacgagtgtttgaatcctgggatc
tgtagtcagatttgcatcaatctgaaaggaggctacaaatgcgagtgtcatgagggttat
cagatggactccagcacaggagtgtgtaaagcagtaggcaaagagccttgtctgatcttc
acaaaccggagagacatccggaagctggggctggaaaggcgcgagtacacacagatagta
gagcagctgcgcaacactgtggccctggatgcagacttcagccatcagaagatcttctgg
gctgacctgggacagaaagccatcttcagtacagtactagacaagcgtgatgatgtgagc
agacacaccaaagtaattgatgtccaaatgcctgtagggatagcagtggactggatctac
aagaacatttactggtcagacctgggcagtaagacaatagccgtgaccaatttcaatggc
acgaagcagaaagtattgtttgacagggacttaaaggagccagcttcgattgcagtggat
cctctctctgggttcctttactggtcagactggggtgagccagctaagattgagaagtct
ggaatgaatggggtagacagacaggtcctggttgaaactgacattcagtggcccaatggt
attacccttgatctgatcaaaagcagactttactgggtggattccaagctgcacacactg
tgtagcgtggatctgaatggagataaccggaaaaaagtcctacagtcccaagactacctg
gctcacccctttgccctcacagtgtttgaggatcgagttttttggacagatggtgagagt
gaggctatttatggggcaaacaagtttacaggatcagatgtgattttgctggtcaacaac
ctgaacgaaccgcaggacattattgtctaccacgaactcgtacagctgtccggcatcaac
tggtgcaatgaaaaagtagaaaatggaggctgttcctacatgtgcctgccagcgcctcaa
atcaacaaacactcccccaagtatacgtgtgtgtgtcccgaaggtcaggagctggcctca
gacggcttgcagtgcagaccagtggcatctacagccgttccacaagatgaagggcgggtg
ctcatacaccccacacatcgtccagacactccgaaacccaaggtcgcaatgcagtcaatg
cccactgaaagaaatctcagcacctccatacatgaggtgaaatcagccaaaggatcagct
gcagcttgggcagctttgccagtgttgctgctggccatgactgcagttgggggttacata
atgtggcggaattggcagatgaagaataaaaaaagcatgaattttgataatccggtgtat
ctgaagactacagaagaagacctgaacattgacataaaccgacagactgcctcggttggt
cacacgtatcctgctatttctatagtaaacacagaagatgacatgccataa
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