Ictalurus furcatus (blue catfish): 128620621
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Entry
128620621 CDS
T09387
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128620621
04091 Lectins [BR:
ifu04091
]
128620621
Proteoglycans [BR:
ifu00535
]
Cell surface proteoglycans
Others
128620621
Lectins [BR:
ifu04091
]
C-Type lectins
Others
128620621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Jag_N
7tm_3
Motif
Other DBs
NCBI-GeneID:
128620621
NCBI-ProteinID:
XP_053501804
LinkDB
All DBs
Position
16:complement(25770914..25790872)
Genome browser
AA seq
2368 aa
AA seq
DB search
MINRTENGASFYGDGFVRLKTVESSSKNTLHVRFRTSSGDGLLFLAAGETDFLWVALQAG
RIQVQVELGSGERTLRSEKAAPLNDLTWHSIELQHDGQNITLTVDKSSWSSLRMPGPDLE
LSVQDGLYVGGLENSDKLYLFNDISHMGFRGCLDEVLFNEHNLLSSLRPYSGYKMVHEVS
LGCSPQFSASENDSISFFSSKAYMSLPMWEVPQEGVFECEFYTSAEDGLLLYSSAGKGDY
VALEIRHKRLVAVVRVDGSKTALSSITVVSEGWHSVRLYVAPRALQLTVGEEILNSSFGA
KSRALQLNGPLFLGGVDANTFSEVRRNGLLSVVSKHLSGGSFKGCLRNIRVNDQNMGLPN
AVVTKDVSVGCEPVKHVKQIATTNPETLQPETPQLDKTNSQTFLILKDLEVPEGGRAPLE
SKHIELNLDFRKLGIRQSQIMFRIEEQPVHGQLRLDVDPDQLENAFSILALWHGQVMYVH
GGSEDPQDFFMFSVFTTSTNKEVPGYLKGSHLHRFNITVTPVNDAPELSLPEGNLFILPE
NSKRHLSMDMLRATDPDSNYTELVFSLLGNLIANAGFLELADNPGKPVTSFSYSDLEGGK
VSFVHKGIKNSRMAIRVSDGEKVSNTVVLRIMAVTLEYKVVNNTGVDVIQGRSSHIGSKH
LAVQVNVAKQVMDIRYDVLDPPFYGELQRLHSNGEWKQTGTFTQKLLEKDRLRYLSTFHG
PQFKNVTDGFKCKISVGSASTGEVLVRVRVRWIQYKVTRSKMEVKDDRKVTLTPQEFRIV
SKNVKLSENDLHVCLLTLPRRGVLLFNDKPLKKNSTFSQRNITDQKVQYKLFEKPNKNLR
DMFSFQVFSEYSYSGRHDFRISIKPNVPSVVLRNHGLSLLEGESKIITKDNLFFETFGSG
AVRYTVVSSPQHGKLLRINNSRHNIAEFTNQDILEERVLYVHDDSETTRDAFTFWASASS
PNDVEGVFNISIQLVNDQKPVRVVDKVFHVARDSQRLLTSEDLRYHDPDSDYDDGQLLYT
RRRISVGELVSVNDTSHKLYQFHQRDLEEKRVLFVHSGASFGRFVLFVSDGKHYTSTLLE
VSAQEPYLKVANNTGLLVQKGQEVMLQSVNFSVTTNTDVRSDEDVLFEIFHPPSHGILLC
EGVEADAFTQYDLKAGHLVYRHDDGRNLMDSFSLTATVSRLRLDVTVPVKVYLESHQKPP
QVIHNHSVVVEEGKHVQIHKTQLEVVHEDNTPDEIMYTMKTPPSHGFLMRSRVDGQNRHD
GTVETFSQWDINAGHIRYVQEKPGRTDDSFSLDVTNGIVTVSDLVVFVEIVPSFLPLEVS
DITLKEGSSTALTEDIIKVTGRHFTELHVQYHVIDGPRHGRIEHSRIPGVPIPSFTRVQV
EHAFISYVHDGSETTGDNFTLVANDTDVRKQSEPRVIHVTVTPVNDEAPVITINRILKVW
VDSVTEITSDDLSASDLDSAPESLEFIITPPSNGHLALKSAPSRPVLNFTQAHIHRRQLV
FLHRGALFGGFHFQVNDGVNFAPRQIFSIAARSLELSLERNRELKVFPGSSKVISVEDLF
IATNDYDDIHENRTVVYSVTSPPRLGRLIRPQDDSSTETKPISTFTQNMLKAGLVVYKHR
EPIAWTATDSFIFTASSPPASFPPHTFNIRISYDNTSPEHGSVLLANTGAVVVEGSRIMI
DKSKLDASNLLGKLPEEERDSYEIWYRVTTLPRFGTIVVGERNLTREKPVFSQLILNKYG
ISYVHDDSETICDSFSFDVWLNPIGRPAQQPQEEDFMVSESFNITVTPVNDLPPLLKTQA
PSLLVVKGDTVALGPENLHVEDLDTLPEDIHYTVISKPNNGFLALEGRLNESTVTFTQAD
VNEGRVHFVQEGRPTSGIFYFSVTDGFHRPLYKLFNLEVHNVTVDVVNNTGLTLVQGQTA
GSLTLQHLAAVTNKKNATIKYYITTPPSHGRLVIKEDQITHFDQEELRLGKVLYQMADLS
SSQDSFEFTVVASETNLTNQVFNITVKPLIHLGKQVRIPDGIPVKIRKDVLDATELASIS
GSDPIFEIIIPPKYGKLVKVTVNLGGASESIESFTFRDVEQGRIAIQEHLNFLAVYGNTT
AVVHNKTAPALEDSFVFLLKAANVQPARGEFVFMVVPYDPMTGKHVVSAAPVHPTIHPAF
NRTSNVVSHVNRPAHMHPTKTPHWVPPKTKTRNRSGNHTRGKATVSNAPKTTSGRHNDPP
RNTPIRVESLPRPASDPLLIILPFLACLFLIIILVVLILVFRHRQEKRAQPSMLQDLPEN
SVEDIVSPSPYLGQPERSLTVPSVVVTPLLPRCPRSPVLEAVHNGAVVPAIVLPDSSMLV
CPWTPMDPDGTPQSSPGSPTLRQNQYWV
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atgataaaccgaactgagaacggagcctctttctacggagacggttttgtgcgtctgaaa
accgtggagtcgtccagtaaaaacaccctccacgtgcgatttcggacctccagcggagac
gggctgctcttcctggctgccggggagacagatttcctgtgggtggcgctacaggcagga
cgtattcaggtgcaggtcgaactcggatcaggggaacgcacccttcgctcagagaaagca
gctccgctgaacgaccttacctggcactccattgaactccaacacgatggccagaatatc
accctgactgtcgacaaaagctcatggagcagtctgaggatgcctgggcctgacctggag
ctcagcgttcaggacggactttacgtcggcggtcttgagaattcggacaagctctacctt
ttcaacgatatatctcacatgggctttcgtggctgtctggatgaagtgctatttaacgaa
cacaatttgctttcatccttaaggccttactctggttataaaatggtccacgaggtgtct
ttgggctgtagcccacagttttcagcctccgagaatgactcgatcagtttcttcagttcc
aaagcgtacatgtctctgccgatgtgggaggttccgcaggaaggcgtatttgagtgtgag
ttttatacctcagctgaagatgggcttctcttgtacagctctgcagggaagggggactac
gtggctttggagatacgacacaagcgcctcgtcgctgtcgttagagtagatggtagtaag
acagctttaagctccataacagtcgtgagtgaaggttggcactcagtgaggctctatgta
gcacctagggctctccagttaacagttggagaggagatcttgaattccagctttggagcc
aaatccagggctctccagcttaacggacccctcttcttgggcggggtggatgcaaacaca
ttttcagaagtacggagaaatggtttgctctctgtagtatcgaagcacctcagtggtggc
tcctttaaaggctgtcttagaaatatccgagtcaatgaccaaaacatgggcctgcccaat
gctgtggtgacaaaagacgtttctgtcggttgtgagcccgtgaaacacgtcaaacaaatc
gccacgacaaatccagagactcttcaaccagaaactcctcaattagacaagacaaactct
cagaccttcttaattctcaaagatctggaggtccccgagggtggacgagcaccactcgag
tcaaagcacattgagttgaacctggatttccgcaagcttgggatccgtcaatcccagatc
atgttccgcatcgaggagcagccggttcatgggcagctgaggctagatgttgatcctgat
caactggaaaatgccttcagtattctggctctatggcatggtcaggtcatgtatgttcac
ggaggctcagaggatcctcaggacttcttcatgttttctgttttcaccaccagcaccaat
aaagaggtgcctggttatttgaaggggagccacttgcacaggtttaacatcactgtcacg
cctgttaacgatgccccagaactcagcctcccagagggaaaccttttcattctcccagag
aactctaagcggcatttgagcatggacatgctaagagctactgaccctgatagtaactac
acagaactggtattctctctactcggtaacctaattgcaaacgctggattcctggaactt
gcggataatccaggaaagcccgtgacctcgttctcctactcggacttggaagggggcaag
gtgagtttcgtccacaaaggcatcaagaactctaggatggccatcagagtgagcgatgga
gaaaaagtgagcaatacggtcgtgctgagaatcatggccgttaccttggagtacaaagtc
gtaaataacaccggcgtggatgtgatccaaggtcgatcttctcacatcggtagtaaacat
ttagccgtgcaagtgaacgtggccaagcaagtgatggatatccggtacgacgtcctagac
ccgcctttctacggtgagctgcaacggctacattccaatggtgagtggaagcagactggt
acctttacacagaaacttctagaaaaggatcggctccggtatcttagcaccttccatggt
ccccagttcaaaaatgtaaccgatggcttcaaatgcaaaatcagcgttggctcggcgtct
acaggcgaggttctcgttcgtgtaagggtccgatggattcagtacaaagtcaccaggagt
aaaatggaggtgaaagatgatcgtaaagtcacgttgacacctcaggaatttagaatagtc
tccaaaaacgtgaaactgtctgagaatgatcttcacgtctgcttgttgactttaccgagg
agaggcgtcttgcttttcaacgacaagcccctaaaaaagaactctactttcagccagagg
aacatcactgatcaaaaagtgcagtataaactttttgaaaagccaaacaaaaacctgagg
gacatgttcagctttcaggtgttttcagaatactcctattctgggagacatgacttcagg
atcagcatcaagcccaatgttcccagcgtagttctgagaaaccatggactttccctcttg
gaaggggagagtaagatcataaccaaggacaatcttttcttcgagactttcggctccggg
gctgtacgttacaccgtcgtgagcagtcctcaacatgggaaactactccgaatcaacaac
tccagacacaatatagcggagttcacaaatcaggacattctggaggagcgcgtcttgtac
gttcatgatgatagtgaaacgacacgcgacgcgtttacgttctgggcttcggcatcatct
ccgaacgacgtcgaaggcgttttcaacatctccatccagttagtgaacgaccaaaaacct
gttcgtgttgtcgataaagtctttcacgttgcacgggacagtcagaggctcctgacgtca
gaggatctccgttaccatgaccctgattcagactacgatgatggacagctactgtatacc
agacggagaatatcagttggcgaactagtctcggtaaacgatacctcgcacaagctttat
cagttccatcaaagagatctggaggaaaagagagtgctgtttgtccacagtggcgcgagc
tttggacgctttgtactcttcgtatccgacgggaagcattatacatcgacgctgctggaa
gtaagtgcccaggaaccttatttaaaggtagccaacaacactggcctactagtccaaaag
ggacaggaagtcatgttacaatcagtcaacttcagcgtcactaccaacaccgatgtccga
agtgacgaggacgtcctttttgagatatttcatcctccgagtcatggcattctactctgt
gaaggcgtcgaggctgacgctttcacgcagtatgacttaaaagcgggtcatctagtctat
cgccatgacgacggcagaaaccttatggactcctttagcctcacggctacggtaagcagg
ctgcgcttagacgtgaccgtgccggtgaaggtgtacctcgagagccatcagaaacctccg
caagtcatccacaaccactctgtcgtagtggaagaaggaaaacacgttcaaatccacaaa
acgcagctcgaggtagttcacgaggataacacaccagatgagatcatgtacaccatgaaa
acacctccatcgcacggcttcctgatgcgctctcgcgtggacggacagaaccgtcacgat
gggaccgtcgaaacgttctcacagtgggacattaacgcaggtcacatccggtacgtccag
gagaaacccggacgcaccgacgactctttctcactggacgtcactaacgggatcgtaacc
gtcagcgatctggtggtgtttgtagaaatcgttccttccttcctaccgctcgaagtgtcc
gatataaccttgaaagaaggatcttcaacagctctaaccgaggacataatcaaggtcacg
ggccgacactttacagaacttcacgtccagtaccacgtgatcgacggtccacgtcacggc
cgtatagagcactccaggatccccggggttcccatcccatctttcaccagggtgcaggtt
gaacacgcgttcatatcgtacgtccatgatggcagcgagacgacaggagataatttcacg
ctggtggcgaacgacacggacgtccgtaagcagagcgagcctcgtgtcatacacgtgacc
gtcacgcctgtaaacgacgaggccccggttataaccatcaacaggatcctgaaggtatgg
gtggactccgttaccgaaatcaccagcgatgacctcagtgccagcgacctcgactctgcc
cctgagagcctggagtttatcatcactcccccaagtaacggacaccttgctttgaagagc
gccccctccagaccggtcctgaacttcacccaggctcacatccaccgccgtcagctggtg
ttcctacacaggggtgccttgtttggcggatttcatttccaggtgaacgacggagtcaat
tttgcaccgaggcaaattttcagcattgccgcccgatctctggagctcagcctggagagg
aaccgtgagctcaaagtctttccaggttcctcaaaagtaatttccgtagaagatttgttc
attgccactaatgactatgatgacattcacgagaatcgcaccgtcgtctattccgttacc
tcacctccgagactgggcaggctgatcaggccccaggacgacagttccacagagacgaag
ccgatatccacgttcactcaaaacatgttaaaggccggtttggtcgtatacaaacacaga
gagccgatagcatggacagcgacagactccttcatctttacagcatcgtctcctcctgct
tccttcccacctcacacgtttaacatccgcatctcctacgataacacaagtccggaacac
gggagcgtcctactcgccaacacaggtgcagtagtggtggaaggcagtcggattatgatt
gataagtcgaagttggatgcctcgaatcttttgggaaagctacctgaagaagaacgagac
tcctacgagatctggtaccgagtcaccacgctgccacgcttcgggacgatcgtcgtaggt
gaacgtaacctgacccgtgagaaacccgtcttctcccagctcatcctcaacaaatatggc
atcagttacgtgcacgatgactcagagaccatctgtgacagtttcagttttgacgtgtgg
ttaaatcctatagggaggcctgctcagcaaccccaagaggaagactttatggtctcagag
tcttttaatatcactgtaacgcctgtgaacgatctgcctcctttactcaaaactcaagcc
ccaagtctcttggtggtcaaaggagacactgtagctttaggtcctgaaaaccttcacgtg
gaagacctggacactttacccgaggacatccactacactgtgatcagcaagccgaacaac
ggcttcctggccctggaaggtaggctaaacgaatctactgtcacgtttacccaggctgat
gtgaacgagggaagggtgcactttgttcaagaagggcgtcccacctcaggaatattctac
ttcagtgtaaccgatggcttccatcgtccactctacaagctcttcaaccttgaagttcac
aacgtcacagtcgacgttgtaaataatacgggattgactctggtgcaagggcagactgca
gggagcctgacacttcagcacttggctgcggtgaccaacaagaaaaacgctaccataaag
tattacattacaacaccaccaagtcatggtaggctcgtgattaaggaagaccagatcaca
cactttgaccaggaggaacttcggctggggaaggttttgtatcaaatggcagacttgtcc
tcgtctcaagacagctttgagttcactgtcgtcgcctctgagaccaacctgaccaatcag
gtgttcaatatcacagtgaagccgctgatccaccttggaaaacaagtccggatccctgat
ggtattcccgttaaaataagaaaggatgttttagacgccaccgagctggcatccatcagt
ggcagcgacccgatctttgaaattattattcctccaaaatacggcaagttagtaaaggta
acggtgaacctaggtggtgcatcagagtctatagaatcctttacctttagggatgttgaa
caaggcagaattgccatacaggagcaccttaactttctagctgtatacggtaacacaaca
gctgttgtgcataacaaaaccgcacctgcacttgaagactcgtttgtgtttcttttaaaa
gcagcaaacgttcagcctgcccgaggagagtttgttttcatggttgtaccatacgaccca
atgacaggaaagcatgttgtttcagcagctccagtgcatccaaccatacatcctgctttt
aacagaacaagcaatgttgtttcacacgtgaacaggccagcacacatgcacccaaccaaa
acaccacactgggtacctcctaagaccaagacacgaaaccgttcggggaaccacacacga
ggaaaagccacagtttctaacgcacccaagaccacatcaggcagacacaacgatcctccc
aggaacacaccgatcagggtagagtctttgccaagacctgcatctgatcctttgcttatt
attctacccttcctggcctgcctgtttcttatcatcatcctagttgttttaatcctggtt
ttcaggcacaggcaagagaagcgggctcagccttccatgctccaagacctgccagagaac
tctgtcgaggacattgtatctccaagcccttacctgggacagcctgagagaagtctaacc
gttccctctgttgtagtgaccccacttttgcctaggtgtcctagaagccctgttttagag
gcagtgcataatggggcagtggtaccagcaatagtactccctgactcttcaatgcttgtc
tgtccatggactcccatggatcctgacggaacaccgcagtcctctcctggttcaccgact
ctgagacaaaatcagtactgggtttga
DBGET
integrated database retrieval system
