Ictalurus furcatus (blue catfish): 128620873
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Entry
128620873 CDS
T09387
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128620873 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128620873 (xrcc4)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128620873 (xrcc4)
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
PLA2_B
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
128620873
NCBI-ProteinID:
XP_053502200
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All DBs
Position
16:complement(9045544..9090547)
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AA seq
340 aa
AA seq
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MKVTVCEISIASKPECTFYLKLEWAKDLGAGFVVLLCDGASAWSGEVSEEDVSKEAQELE
MPRERYVHDLQLILSGEGQADQSYSFRLAPKQSGSPMLQLSYEKVQRDMSFRFGMVELLP
VSEPTKVIKELISYGLERSAHLQAKKHIVLKQNQRLINEQEHITTEMKRYIKEKEILESE
LYNRFVLVLNEKKAKIRTLQERIKQLQNTIQDKKDRWKKGEACHGGNEHADEKLENSDYG
NTTDEEEDGHPKTRNLKPSNQVLASNPMDGLNDIADVAPSRKRRRHVIQPLETPSKGPAL
EQRQTLRNDLHEEAKAEVSKVLFQQPTPISPDPDDLFDDI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactgtatgtgaaatatctatagcatctaaacctgagtgcacattctacctc
aagttagaatgggccaaagacctgggagctggttttgttgttctgctctgtgatggtgcc
tctgcttggagtggtgaagtatcagaggaggatgtcagcaaggaggcccaggagttggag
atgccaagagagaggtatgttcatgacctgcagctgattctgtctggtgagggacaagca
gaccagagctacagctttcgcctggcacctaagcaatccggaagcccgatgttacagcta
tcttatgagaaagtgcagcgtgacatgtcgttcaggtttggaatggtggaactgctacct
gtgtcagagcccactaaagtcataaaggaactcattagttatggcttagagcgcagtgct
cacctgcaagccaagaaacacatcgtgctcaagcagaaccagagattgattaatgaacag
gaacacatcactacagaaatgaagagatatatcaaagaaaaggagatattggagagcgag
ctgtacaaccgctttgtgctggtccttaatgagaagaaggccaagatccgcactttacag
gagaggatcaaacagctacagaatactatacaagacaaaaaggatagatggaagaaaggt
gaagcctgtcatggaggaaatgaacatgcagatgagaaacttgaaaatagtgactatgga
aacaccacagatgaggaagaggatgggcatccaaaaactcggaatctgaaacccagcaat
caagtgctggcaagcaacccaatggatggtctaaatgacattgcggatgtggcaccaagc
agaaaacggcgtcggcatgttattcaacccttggaaaccccatcaaaaggaccagctctg
gagcagagacagaccttaaggaatgatctgcatgaagaagccaaagcagaagtgagtaaa
gttctatttcagcagcctacaccaatcagcccagatccggatgacctgtttgatgacatc
taa
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