Ictalurus furcatus (blue catfish): 128620884
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Entry
128620884 CDS
T09387
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128620884 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128620884 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128620884 (vps36)
Membrane trafficking [BR:
ifu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
128620884 (vps36)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128620884 (vps36)
Exosomal proteins of colorectal cancer cells
128620884 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
GRAM
Laminin_II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
128620884
NCBI-ProteinID:
XP_053502227
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All DBs
Position
16:16775871..16786755
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AA seq
381 aa
AA seq
DB search
MDRFMWTNGLLEMNETLVIQQRGVRLYDGDDKVKLDVGVVLLSTHRLIWRDQKNHECCIC
IPLSQIIFFEEQAAGIGKSAKIVIHLHPAPANREPGPYQNSKFSYIKLSFKEHGQIEFYR
RLTEEITQRRWENTPVSQPITPAGLKTGRTRAVGIVGIERKLEEKRKETDKNISEAFEDL
SKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDILLTPLEERGGMMALTEVYCLVNRARGMELLSPEDMVNACKLFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMITSAIDNVSEKGSLTAEEFAKLLGLSVLLAKERLLLAE
KMGHLCRDDSVEGLRFYPNLF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcatgtggaccaacggactccttgaaatgaatgaaactttagtaatccag
cagaggggtgtcagattatatgacggagacgacaaggtgaagctcgatgtaggagtggtc
ctcttgagcacacatcggttaatttggagggatcaaaagaatcatgagtgctgtatatgt
ataccgttgtctcagatcatattctttgaggagcaggctgcaggaattgggaagagtgcc
aagattgtcattcacctgcatccagctcctgctaatagagagcctgggccataccagaac
agcaagttctcctacattaaattatcctttaaggaacatgggcaaattgagttttacaga
cgtctcacagaggaaattacacagaggaggtgggagaatacgccagtgtcccagcccata
acaccagcaggactaaagacaggaagaacacgcgcagtagggattgttggcattgagcgg
aagctggaggagaagaggaaagagacagacaaaaacatttcagaggcgtttgaagatctc
agcaagcttatggagaaggctaaagagatggttgagctttccagatccattgccaacaaa
atcaaagacaaacaaggggacatcactgaggacgagactatccgcttcaagtcgtatttg
ttgagcatgggcatcgccaaccctgtaaccagggaaacacacggctcaggcacacactac
cacatgcagcttgctaaacagctgggagacatactgctgacaccactggaggagcgaggg
ggtatgatggccctcacggaggtctactgtctagtaaaccgagcacgagggatggagctt
ctttctcctgaggacatggtcaatgcctgcaaattgttcgagtctctgaaactccctctc
aggttgcgagtgttcgacagtggcgtaatggtggttcagcttcaatctcacagtgaagaa
gagatgattacatctgctatcgataatgtgtctgagaagggctccttaacagcagaggag
tttgctaaacttttaggactgtctgttcttcttgcaaaagagagactgctgctggctgag
aaaatggggcatctatgcagagacgactctgtggaaggcctgcgcttttatcccaacttg
ttctga
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