Ictalurus furcatus (blue catfish): 128620889
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Entry
128620889 CDS
T09387
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128620889
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
ROBO family
128620889
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Med3
Roughex
Motif
Other DBs
NCBI-GeneID:
128620889
NCBI-ProteinID:
XP_053502236
LinkDB
All DBs
Position
16:17856239..18001724
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AA seq
1653 aa
AA seq
DB search
MRLCHMCSRSVYNLRNSEINSQRKPGPMAYYIGIYIFLGLLQLCSGSRLRQEDYPPRIVE
HPSDLIVSKGEPATLNCKAEGRPAPTVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRI
VHGRRSKPDDGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPADVMVAEGEPAVLECQ
PPRGHPEPTISWRKDGANINDRDERITIRGGKLMITNARKSDAGKYICVGTNMVGERESE
IAELTVLERPSFTRRPTSVVVLADESVEFRCEARGDPFPTVRWRKEDGELPKGRYEILED
HTLSLRRVTPADVGSYSCLAENMVGKAEASATLTVHGFTLPPTFVIRPRNQVVGVGRMVT
FQCEAMGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQTGDLTITDVQRADGGHYSCQ
ALNIAGSVITKALLEVTDVVSDRPPPVIRQGPENQTIVVDGTVLLNCITTGSPVPTVLWK
KDGVLVSTHDSRISQLDTGALQIRYAKLSDTGVYTCVSTSPSGEASWKAYLAVEEFGMAV
QPIRPTDPNLIPSAPSKPEVTDVTRTSVTLTWKANTNGATPTSYVIEAFSHSSGSSWVTL
ADHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITDAIRTQDTPPTIQGVDHRQIQ
KELGDVVVHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSSESGEPRSQWGVFEVR
TPGEDGAVVPQLKKGVTYEFKVRPFFDEFQGADSEVKVVRTLEEAPSGAPRGVTITKSDT
NGTAILVAWQPPPEEEQNGVVQEYKIWCLGNESRYHVNRTVDGSTFSVVIPSLSPGIRYS
VEVAASNGAGPGVKSDVTFFQLDSSGQVWDRFDDPDTFSNISDVVKQPAFIAGIGATCWV
VLMVFSVWLYRHRKKRSGLSSSYAGIRKVPSFTFTPTVAYQRGGEAVCSAGRPGLLNMGD
SANQPWLADSWPNACANHKDCSINCCNGGNGTSDSNLTTYSRPADCIANYNSQLDNKQGV
LIGSDSAVYSDVDLSNKLNEMKTFNNPSMCYMGPGGSPPTPYEPTPYATTQLIQSNIMSK
NSGAGPGDKRWKPQQPKPPELPSQLQFNVMEQNRLNKDHYRGGEVCLPATIPYNQANEHS
SAGSYHSSDRASNSTSGSQNHKKGTRTPKLSKQGGVNWAEPLPPPPINPPTSRSSEDYLQ
PMDKSFDPDPQKLQSRMYLHQGETEEEEEQENLVRCPTPPVRGAASSPVGISYSHQSTVT
LTPSPQGELHNNQEDRRRHITSPPPPNQALSPSHTYAYTDGDDDECDYTDGESGQRQYQQ
NPGSHYQPQQQIQQQQVHLPRRLHLHRGLEQTPASSTGDLESSVTGSMINGWGSASEEDN
GSSGRSSAISSSDGSFFTDADFAQAVATAAEYAGLRVAHYPGAGPEDIGRGGQRYHIGHR
PSSPVSTDSNMSTAVMQRKPHKRHKQHVAGHQSQQQQQQQQQQQQQQQQHQQQPDEFTDD
PSMPLSPSSVGMKTTNHGSRCGYEERGATLPRMGCGESRDRRGSAGGYRTREASAERRGE
HDKHRNTPGGKGAGKTRQHAVAEDIPPYNRPSFPTAQGQRDAPSSSSSISSRGSGGRRRG
EVGSGGRKNPSDTGLPSLGVLSHQEEELELLES
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgagattatgccacatgtgcagcaggagtgtatacaatttaaggaattctgaaataaat
tcccaaaggaaacctggaccgatggcatactatataggaatttacatctttctgggatta
ctgcagctctgctcaggttctcgtctccgtcaggaggactatcccccacggattgtggag
cacccatcagacctgatcgtgtcgaagggtgagccggccacgctgaactgtaaggccgag
ggtcgtccagcacccactgtcgagtggtataaagacggtgagcgtgtggagacagacagg
gacaacccacgttcgcaccgtatgctccttcccagcggctcactcttcttcctgcgcatc
gtgcacggtcgccgcagcaaacctgacgacggcagctacgtgtgtgtggccaggaactat
ctgggggaggcggtcagccacaacgcttcactggaagtagccatcctgcgtgatgatttc
agacagaaccctgctgatgtgatggtggccgagggggaaccggctgtgttggaatgccag
ccccctcgtggccacccagagcccaccatctcctggaggaaggatggagccaacataaac
gaccgagacgagcgcataacgatccgaggtggaaagctgatgattactaatgcaaggaag
agtgatgctgggaaatacatctgtgtgggaaccaacatggtgggagagcgggagagtgag
attgctgaactgactgttttagagagacccagcttcacgaggaggcccaccagtgtggtg
gtgctggctgatgagagtgtggagtttcgctgtgaggcccgtggagatccttttcccacc
gtccgctggaggaaagaggatggagaattacccaaggggaggtacgagatccttgaagac
cacacactgagcttgcgacgcgtaactccggctgacgtgggctcctacagctgcctagct
gaaaacatggtgggcaaggctgaggcttccgctacgctgactgtgcatggtttcacactg
ccccctacgtttgtcattcggccccgcaaccaagtggtgggcgtgggccgaatggtcacg
tttcaatgtgaggcgatgggaaacccacagccggccatattttggcagagagagggcagc
cagaaccttctgttctcctaccagcccccgcagccctccagccgtttttctgtctctcag
accggcgatctcaccatcacagacgtacagcgtgctgatggaggacactacagctgtcag
gcactcaacatcgccggcagcgtcatcaccaaggccctgctggaggttacagacgtggtt
tcggatcggcctcctccggtgattcgacaaggtccagagaaccagactatagttgtagat
gggacggtgttgctgaattgcataacaaccggatctcctgtaccaacggtgctctggaag
aaagacggggtgcttgtgtccacccacgactcgcgcatctcccagctggacaccggagct
ctgcagatccgctatgccaagctcagtgatacaggagtgtacacttgcgtgtccaccagt
cccagcggggaggcgtcatggaaagcatacctggctgtagaagagtttggaatggcggtc
cagcctatcagacccacagacccaaacctgatccctagtgcaccctccaagcccgaggtg
accgatgtcactcgcacctctgtcacattgacatggaaggccaatacaaacggagccaca
cccacatcttacgtcattgaggcctttagccattcatctgggagtagttgggtgactctt
gccgaccatgtgaagacggaatcgttcgtgctgaagggtctaaagcctagtgcggtgtat
cttttcctggtaagagcagccaatgcttacggcctgagcgaccccagtcctataacagat
gccatacggacacaagacacgcctcccaccatacagggagtggaccaccgtcagatccag
aaggaactgggggatgttgtggttcacctgcacaatcccactatcctctcatcctcctca
gtgagagtgcagtggacggtggagcagcagtctcaatacattcagggctacaaggtcatg
tatcggccatcatcggagtccggtgagccccgcagtcaatggggagtgtttgaagtgcgc
actcctggcgaggacggtgctgttgtacctcaactcaaaaagggtgtcacttatgagttt
aaagtgcgtccattctttgacgagttccagggagctgacagtgaggtgaaggtggtcaga
acgttggaggaggctcctagtggtgccccacgtggagttaccatcaccaagagcgacacc
aacgggacagccatcctggtcgcctggcaacctcctccagaggaggagcagaacggagtg
gtccaggagtacaagatttggtgcctgggaaatgagagtcgataccatgtcaaccgtacc
gtggacggctccactttttccgtcgtcatccccagtctgtcgcctggcattcgctacagc
gtggaggttgctgccagcaatggagctggaccaggggtcaagagtgacgtcaccttcttt
cagctggactcgtctggccaggtgtgggaccgtttcgatgacccggacactttttccaac
atctctgatgtggtgaagcagcctgctttcattgcaggcatcggcgccacctgctgggtg
gtgctcatggtcttcagcgtgtggctgtatagacaccggaagaagaggagcggcctcagc
agcagctatgccggcattcgtaaagttccatcattcactttcactccaacagtggcatat
cagagaggaggagaagctgtttgcagtgccggacgacctggcctactaaacatgggagat
tcagccaaccagccatggctagctgactcatggcccaacgcctgtgccaaccacaaagac
tgcagcatcaactgctgtaatggtggcaatggaaccagcgacagcaacctgaccacctac
agccgtccagctgattgcattgctaactacaacagccaactggacaataagcaaggagtg
ctgataggctccgactcagctgtgtacagtgatgtagacctttctaacaaactcaatgaa
atgaagaccttcaacaaccccagcatgtgctacatgggacccggaggcagcccgcctaca
ccatatgagcccacaccttatgcaaccacccagctcatccaatcaaacatcatgagcaag
aacagtggtgcagggcctggtgacaagcgctggaagccccagcaaccaaaacccccggaa
ctaccatcacagttacagtttaatgttatggagcaaaataggctgaacaaggatcattac
agaggtggtgaagtttgtctgcctgccaccattccctataaccaggcaaatgagcacagc
tctgcagggtcctaccacagctccgacagagccagcaacagcacttcggggagtcaaaat
cataaaaaaggaactcgcacccctaaactgtctaaacagggtggagtgaactgggcggag
ccactgcccccacctcctatcaacccccctaccagccgcagctctgaagactacctacag
cccatggataaaagttttgatccagacccacagaagcttcagagccgcatgtacctgcac
caaggggagacagaagaagaggaagaacaggagaatttggttagatgccccactccacct
gttagaggggcagcctcctcacctgtaggaatatcctacagccaccagtccacagtcaca
cttactccctcccctcagggagagctacacaacaaccaggaagatcgcagacgacacata
acaagcccccctccaccaaaccaggccctctcaccctcgcacacctacgcctatactgat
ggcgatgatgacgagtgtgattacacagatggtgagtcaggccagaggcagtaccagcaa
aacccaggatcccactaccagcctcagcagcagatccagcagcagcaggtccatctccca
cgccggctgcatctgcacaggggcctggagcagactccagcctcgagcacgggggacctg
gagagctccgtcactgggtcaatgatcaacggctggggctcggcatctgaggaggacaac
ggctcatcgggccgctccagtgccatcagctcctccgatggctcttttttcactgatgct
gattttgcccaggctgttgccacggcagctgagtatgctggcctgcgagtggcccattat
ccaggggcagggcctgaagacattggaagaggtggtcaaagataccatattggccaccgt
cccagtagcccagtgtccacagacagcaacatgagcactgcagtgatgcagaggaaacca
cacaaaaggcacaagcagcatgtggctggtcaccagagccaacagcagcagcagcagcag
cagcagcagcagcagcagcagcagcaacatcaacagcaaccagatgaatttacagatgac
ccatcaatgcccctgagcccctcctcagttggaatgaagaccaccaatcatggttccagg
tgtggatatgaggagaggggtgcaacgctgcccaggatgggatgtggagagtccagagac
aggcggggaagtgcagggggctaccggacaagagaggcctcagctgagcgacgaggggag
cacgataaacaccggaacacacctggaggaaaaggtgctggcaaaacacgccaacatgca
gttgcagaggacattccaccgtacaacaggccatcattccccacagcacagggtcagaga
gatgctcccagctcctccagttcgatttcgtcccggggctctgggggccgccggcgaggg
gaggtaggatcaggaggccgtaaaaaccccagtgatacaggactcccaagtttgggggtc
ttatcccaccaggaagaagagttagagctgctggagagttga
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integrated database retrieval system
