Ictalurus furcatus (blue catfish): 128620920 Help Entry 128620920         CDS       T09387                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism ifu  Ictalurus furcatus (blue catfish) Pathway ifu04382   Cornified envelope formation ifu04510   Focal adhesion ifu04512   ECM-receptor interaction ifu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ifu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128620920 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128620920 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128620920 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     128620920 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ifu04147]     128620920 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:ifu00536]     128620920 (col4a3) Exosome [BR:ifu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    128620920 (col4a3) Glycosaminoglycan binding proteins [BR:ifu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128620920 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  128620920 NCBI-ProteinID:  XP_053502252 LinkDB All DBs Position 17:complement(4602714..4646983) Genome browser AA seq 1656 aa AA seqDB search MRATPVGILFLGFVTLAHTEECGVNGKPKCDCSVVKGEKGEQGFPGLIGSQGEDGFSGDE GQPGPPGFMGDPGIQGLPGPKGSRGLPGKPGSWGSAGIPGLPGDEGPQGPPGSPGCNGTK GERGSPGLPGLPGDVGLQGENGPPGPKGDTYSFPYPKDVTGEKGLPGRDGPKGEPGQQGD CGPMGPMGRVGLEGKRGYPGVPGEKGVKGSSMIGPRGAKGVRGFPGIPGDRGVILFLEVH RELKGEPGDPGHRGNSGIPGDRGLYGPKGQKGCTGDPGPLGEDGANGLEGEYGLNGSPGD KGYRGPPGIPGLKGEKGDCGCPGPPGECLPRNTPEKGQRGHKGFPGPPGLTGFQGVSGFP GKTGIPGVGTPGKFGDPGPPGLSGIKGEKGESASQTVGPIGRDGPRGQPGPYGDPGPEGQ PGICQGPPGLRGKKGMQGPVGETGEHGEQGEKGDLCRLCPFSHPTRAHPGPPGIRGPTGK PGANGKSGNKGSMGIKGQEGAPGNPGLIGAPGSQGKQGPKGDPGFVGAGAIGDQGDPGFQ GLPGKNGQNGIPGRPGFKGPRGDKGNPGPFGAKGDKGESGSKGLPGIPGETGFQGCPGVG ATGEPGDKGSFGVRGLPGNPGDPGEKGGPGLVIITPGDPGKCGTKGLKGPPGEPGCLGPK GLCGQPGPCGIKGENGLSQLGLQGPPGCKGEKGIQGHQGPPGIGEPGSPGPTGQCGIPGL KGNSGYGNPGPTGRQGPPGDDGTIGPIGESGCNGIAGVFGQPGRAGCPGPRGDTGYDGPP GVTGPAGVCTSGWPGTTGVQGQQGMPGITGCRGQKGMQGESGYQGQGLPGSAGTFGAPGL NGQAGPPGLAGPKGLKGNNGMPGGTGPRGNDGPPGQPGCPGPSGSPGCPGPPGSKGIAGS DGLPGCRGPRGQKGNRGDPGPKGDPQTVYNPGDLGDPGCIGPSGLTGLKGDSGTKGPTGR YGQHGSQGSPGPPGPPGERGRDGLPGEPGVDGYVGEVGLSGPPGPKGAKGTPGQNGTPGD PGTLGVNGPKGDKGEPSSPGPGEQGHPGEKGEPGIQGLNGKKGERGSIGPVGVPGSEGIC SVVGETGLPGQPGPPGFPGEKGLDGQPGPLGCPGPIGPPGCSGSPGDPGPQGLKGNQGSD GIPGLAGEKGNAGAPGYGPPGPAGARGKPGCKGEPGAMGETGPPGQCGTVGDPGPCGEPG PPGPPGNPGAQGLCVDGPKGERGPPGQPGPQGPRGIYGPPGQPGLGFKGDKGNTGTSGPR GVCGCPGDTGPRGFPGYAGSDGFPGPKGETGQKGATGSRGQRGRDGSHGQPGYQGEKGPN GPPGVPGADDYYKNTLIPGDRGLPGAPGKSGPPGVTGSPGLKGATGAPGPKGLPGQDGFP GPQGLPGQKGSRGLAGLPGDLGFTGEDGQKGSRGPPGPCLANNARDSFLFTKHSQTQDIP YCPSGSSKVYSGYSLLFINANKRGHGQDLGTMGSCLQMFSTMPFLFCNSDNVCRYASRND YSYWLSTGTPMPSDLPSISGDTLAQYVSRCSVCDAPGNVIAFHSQNNTVPSCPIGWRSLW QGYSYVMQSGVGSEGSGQPLSSPGSCLENFQRIPFIECLGRGTCNYYSDAYSYWLAALDP SQMFSKPSPQIVKEDYPSIISRCQVCMKEPSCNQSS NT seq 4971 nt NT seq  +upstreamnt  +downstreamnt atgcgcgcgacaccagtgggaatattgttcctcggatttgtgacgctcgcgcacaccgag gaatgtggagttaacgggaagcccaagtgcgactgcagtgtagtcaaaggagaaaagggt gagcaaggctttccaggtctgattggatcacaaggggaagatggattttcaggagatgaa ggccaacctggacccccgggcttcatgggtgacccaggaatacaaggtttaccaggaccg aaaggctcacggggactccctgggaagccaggatcctggggttctgcaggaatacctgga ctcccaggagatgaaggccctcaaggacctcctggtagcccgggatgcaatggcacaaag ggtgaacgtggttcacctggacttccaggacttccaggagatgtcggcttacagggtgaa aatggtccccctggccctaagggagacacatactccttcccatatcctaaagatgtgact ggagaaaaaggtttgccaggtagagatgggccaaagggtgagcctggacaacaaggtgac tgtggaccaatgggaccaatgggacgtgtgggacttgaaggtaaaagaggataccctggc gttccaggagaaaagggtgtaaagggatccagtatgattggcccccgaggtgcaaaaggc gtgagaggttttcctggcatacctggtgacaggggtgtcatactatttctcgaagtacac agagagctcaaaggagaaccaggggatccgggacacagaggcaactctggaattccaggc gatcgaggactttatggccctaaaggacagaaaggatgcacaggagatccaggaccactg ggggaagatggggcaaacgggctggagggagagtacggtctgaacggctctcctggtgac aagggatatagggggcctcctgggatccctggtttaaagggggagaaaggtgactgtggt tgccctggtcctccgggagaatgtcttccacgcaatacacccgagaaaggccaacgagga cataagggcttccctggacctcctggccttacagggtttcagggtgtaagtggctttcct ggaaaaacaggcattccaggagtaggtacacctggaaagtttggggatcctggtccccca ggcttaagtggaattaagggtgaaaagggagaatcagcatctcaaacagtaggaccaata ggacgtgatggacctcggggacaacctggaccttatggtgaccctggtcctgaaggacaa ccaggaatatgtcagggcccaccggggttgagaggaaagaaaggcatgcaagggcctgtg ggtgaaactggagaacatggggaacaaggtgagaaaggagacctctgcagactatgccct ttttcacaccctacacgtgcacatccagggccacctggtatacgtggtccaactggaaag ccaggtgctaatggaaaatctggcaacaaaggatcaatgggtattaaagggcaggaaggt gcacctggcaatccgggtttgattggtgctccgggcagtcaagggaaacagggaccaaaa ggagaccctggctttgtaggagctggggctattggggaccaaggtgatccaggatttcag gggctcccagggaagaatggacagaatgggataccgggaagaccaggatttaaaggccca aggggagacaagggaaatccgggcccttttggggctaaaggcgataagggcgagtctgga tcaaagggattaccaggaatccctggtgaaacgggatttcagggctgccctggagttgga gcaacaggggaacctggtgacaagggcagctttggtgtacgtggcctgccagggaatcct ggagatccaggtgagaaaggtggccctggtttggtgatcataacacctggagatccaggg aagtgtggaacaaagggtcttaaaggtccacctggggaaccagggtgtctgggacccaaa gggttatgtgggcaaccaggaccttgtggtataaaaggcgaaaatggattgtcacaactg ggtttacaaggaccgcctggttgtaaaggtgaaaaaggcattcaaggtcatcaaggtcca cctggcattggagaacctggtagtccaggacccacaggacaatgtggaataccagggtta aagggcaatagtggttatggaaatccagggcccactggcaggcaagggcctccaggggat gatgggacaattgggcctattggtgaatcaggttgtaatggaatcgctggagtttttgga cagccagggagagctggatgcccagggcctaggggtgacacaggatatgatggacctcca ggggtgactggtccagcaggagtctgtacttctgggtggccaggtacaacaggagtccaa ggtcagcaaggaatgcctggaattacaggatgtcggggtcagaaaggtatgcagggtgag tccggatatcaggggcaaggtttacctggttctgctgggacgtttggggcacctggttta aatggacaagctggtccacctggtctagccggaccaaagggattgaaggggaataatggc atgcctggtggcacaggcccacgggggaacgacgggcctcccggccaacctggatgtcct ggaccttctggaagccctggatgtcctggaccacctgggtctaaaggtatagctggcagt gatggcctaccaggttgcagaggtccacgaggccagaaagggaatcggggagatccaggt cctaaaggagacccgcaaactgtctacaatcctggcgacctaggagaccccggatgcata ggtccttctggtctgactgggcttaaaggggacagtggaaccaagggcccaactggcaga tatgggcaacatggatcacaaggcagccctggtccaccgggtcctcctggagaacgaggc cgggatggcttaccaggtgagcctggtgtcgatggctatgttggagaagttggactttcg ggtcccccaggtcccaaaggtgccaaggggacacctggtcaaaatggaacaccaggagac cctggtactctaggcgtaaatggcccaaaaggggacaaaggtgaaccaagttctcctgga ccaggagagcaaggacaccctggagagaagggtgagccaggcatacaaggccttaatgga aagaaaggagaaagaggaagcattggccctgttggtgttccaggatcagaagggatttgc agcgtggttggcgagacaggactaccaggacaaccaggacccccaggatttcctggagaa aaaggtttagatggacagccaggccccctaggttgtccgggaccaataggcccaccaggt tgttctgggtcaccgggcgatccgggtcctcaaggtcttaaaggaaaccagggcagcgac ggcattcccggactagctggagaaaaagggaatgcaggagctcctggatatggacctcca gggccagctggtgccagaggtaaaccaggttgtaaaggggaaccaggagccatgggggaa actgggcctccaggacaatgtggtacagtaggagacccagggccctgtggtgaaccaggg ccaccaggaccccctgggaatcctggtgcgcagggtttgtgcgtggatggccccaaggga gagcgaggacctcctggacaaccaggaccacaagggccaagagggatatatggtccccca ggacaacctggtctaggctttaagggagataagggcaacactgggacttctggaccacgc ggagtgtgtggttgcccaggagacactggtccacgagggtttccaggttatgctgggagc gatggtttccctggtcccaaaggagaaacaggacaaaagggtgcaactggatctcgaggt caaagaggaagggatggctcacatggccaaccaggatatcaaggagaaaaagggccaaat ggaccaccaggtgtaccaggggcggatgattactacaaaaacacgcttattcccggagac cgtggtctgcctggagctccaggaaagagtggacctcctggagtaaccggttcaccagga cttaaaggggcaacaggagcccctggccctaaaggacttcctggccaagatgggttccct ggtcctcaaggtttacctggacagaaagggagcagaggattagcagggttgccaggagat ttgggttttactggtgaagatggtcagaagggttccaggggtccaccaggaccctgcttg gccaacaatgccagagatagcttcctgttcaccaagcacagtcagacacaagacatccct tattgccctagtggatccagtaaagtctactctgggtactcactcctttttatcaacgcc aacaaacggggacacggccaagatcttggcactatggggagctgtctacagatgttctcc accatgccattccttttctgtaatagcgataatgtctgtcgctatgcctcccgaaacgac tactcctattggctgtccactggcacacccatgcccagtgacctgccctcaatctcaggt gataccctggcgcagtatgttagcaggtgctcagtatgtgacgctccaggtaacgtgata gcgtttcacagccagaataatacagtcccgtcatgccccatcggatggcggtctctgtgg caaggctactcttatgtcatgcaatcaggtgtgggttccgagggctcgggtcagcccctg tcctctcctggatcctgtctggagaatttccagaggattccctttatcgagtgtcttggc cgtggtacttgtaactactactcagatgcctacagctactggctggccgctctggatcct agccagatgttcagtaaaccatccccgcagatagtaaaagaagactacccgagcatcatc agtcgctgtcaggtgtgcatgaaggagccgtcttgtaatcagtcatcctga

DBGET integrated database retrieval system