Ictalurus furcatus (blue catfish): 128621034
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Entry
128621034 CDS
T09387
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc)
KO
K04646
clathrin heavy chain
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04142
Lysosome
ifu04144
Endocytosis
ifu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128621034 (cltcb)
04142 Lysosome
128621034 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128621034 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128621034 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128621034 (cltcb)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128621034 (cltcb)
Exosome [BR:
ifu04147
]
Exosomal proteins
Proteins found in most exosomes
128621034 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
128621034
NCBI-ProteinID:
XP_053502477
LinkDB
All DBs
Position
17:6985668..7012076
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GHAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
EKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLDASESLR
KEEEQATEAQPIVYGTPQLMLTAGPSVAVPPQQPYGYGYGAPAGYGQPAQPGFGYSM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccagaacctgggcatt
aacccagcgaacatcggcttcagcacgctcactatggagtcggataagttcatctgcgtg
cgggaaaaggtcggcgagcaagcgcaagtcgtcatcatcgacatgagcgaccccaattcg
cccatccgcaggcccatctctgcagatagcgcgatcatgaacccggccagcaaagtgatc
gctcttaaagccgcgaaaaccctgcagatcttcaacatcgaaatgaagagcaagatgaag
gcgcacaccatgaccgacgacgttacgttctggaagtggatctccctgaacaccgtagcg
ctcgtaaccgataacgcagtctaccactggagtatggaaggcgactctcagcccgttaaa
gtgtttgaccggcattccagcttagccggctgccaaattatcaactaccgcaccgatgcc
aaacagaaatggctgctgcttattgggatttccgcacagcaaaaccgtgtggtgggagca
atgcagctgtactctgtggacaggaaggtgtcgcagcctattgagggccacgctgcaggc
tttgctcagttcaagatggaggggaacgctgaagaatccacactgttttgcttcgccgtt
cgtggccaagcaggaggaaagctgcacattattgaagtcggaacacctccgtctggcaat
cagcctttcccgaagaaagccgtcgacgtgttcttcccacctgaagcccagaacgacttc
cctgtcgctatgcagatcagccccaagcaggatgtggtctttctcatcaccaaatacggc
tacatccacctgtacgaccttgaaactggcacatgcatctacatgaacaggatcagtggg
gagaccatcttcgtcaccgctcctcacgaggctacttctggcattattggtgtcaatcgg
aagggacaggtgctgtcggtgtgtgtggaggaggagaacatcatcccctacatcaccaac
gtcctgcagaaccctgatctggcgctgcgcatggccgtgcgcaacaacttggctggtgca
gaggagctctttgcacgcaagttcaacactctgttcgcagggggcaactactccgaggct
gccaaagtagctgccaacgcaccaaagggcattttgaggaccccggacaccattcggcgt
ttccagagtgttcccgcccagccaggccagacctctcctctgctccagtacttcggcatc
ttgctggatcagggccagctcaacaagttcgagtccctggagctctgcaggcccgttctg
cagcagggccgcaagcagctgctggagaagtggctgaaggaagataagctggagtgctct
gaagagctgggtgatttggtgaaatctgtggacccgaccctcgctctcagtgtctatctg
agagcaaacgtccctaacaaagtcatccagtgttttgccgagactggccagttccagaaa
attgtactgtatgcgaagaaggtcggctacactccagactggatcttcctgcttcgaaat
gtgatgcggatcagtccagagcagggcctgcagttctcccagatgttggtgcaggatgag
gaaccactggctgatattacccagattgtggatgtgttcatggagtataacctgattcag
cagtgcacttccttcctgctggatgctctaaagaacaaccgacccactgaaggcccactg
cagacaaggctgttggagatgaacttgatgcatgcaccacaggtggctgacgctattttg
ggaaaccaaatgtttacccactatgaccgagcccacgtggcccagctgtgtgagaaagct
ggattgctgcagagagccctggaacactatactgacctgtatgacatcaaacgtgctgta
gtgcacacccacctgctcaaccctgagtggctggtgaacttttttggctccctgtcagtg
gaggactctctggagtgcctgagagccatgctctcggccaacatccgccagaacctgcag
atctgcgtccaggtggcttccaaatatcacgagcagctcaccacccagtccctcaccgag
ctctttgagtcttttaagagctttgaaggtctgttctatttcctgggctccattgtgaac
ttcagtcaggatccagaggtccatttcaagtacattcaggcagcctgtaaaacgggacag
atcaaagaggtggagagaatctgcagagagagtaactgctacgatgccgagcgtgtgaag
aattttctgaaggaagcgaaattgaccgatcagctgcctctcatcatcgtgtgcgaccgc
tttgactttgtccacgacctggtcctttatctataccgcaacaacctgcagaagtacatc
gagatttacgtccagaaggtgaaccctagccgcttacctgtggtgattggtgggctgttg
gacgtggactgctcagaggacgtcattaagaacctgatcctggtggtccgaggacagttt
tccacagatgagctggtggctgaggtggaaaagcggaacagactgaagctgttgctgccg
tggctggaagcccgtattcatgagggatgcgaagaacctgctacccacaatgccctggct
aagatctacatcgacagcaacaataaccccgagcgattcctcagagagaacccgtactac
gacagccgtgtcgtgggcaagtactgcgaaaagagggacccccatctggcttgtgtggct
tacgagagaggacagtgtgaccaagagcttattaacgtatgcaatgaaaactcgctcttc
aagagtctgtctcggtatttggtgcgtcgtaaggaccctgagctgtgggccagcgttctc
ctggagagcaaccctttcagaaggccactgatagaccaggtggtgcagactgcactctcg
gagacccaggacccagaagaggtgtccgttacagtcaaagccttcatgactgctgatctg
cctaatgagctgattgagcttctcgagaagattgttttggataactctgttttcagtgag
cacaggaacttgcaaaaccttctgatcctgacggccatcaaagccgatcgcactcgcgta
atggagtacatcaaccgcctggacaactacgacgcccctgacatcgccaacatcgccatc
agcaacgagctctttgaggaggcttttgccatcttcaggaagtttgatgtgaacacatct
gcagtgcaggttctgatcgagcacattggcaacctggaccgggcctacgaatttgctgaa
cgctgcaacgagcctgctgtgtggagccagttggctaaagctcagctgcagaaaggtctg
gtaaaagaagccatcgattcctacatcaaggctgatgacccgtcagcatacatggaagtg
ggacatgctgcagcccaaagcggaaactgggaggatttggtcaagttcttgctgatggca
cgtaagaaggcccgtgagtcatatgtagagaccgagctgatctttgcattggctaaaacc
aaccgcctggctgaactggaggagtttatcaacggcccgaacaatgcccacatccaacaa
gtcggtgatcgatgctacgatgagaagatgtatgaggcggctaagctgctgtacaacaat
gtgtccaactttggccgcctggcctccactctggtccaccttggagagtaccaggctgct
gttgacggagcacgcaaggccaacagtacacgaacctggaaagaggtctgttttgcctgc
gtcgatgggaaggaattccgtctggcacagatgtgcggcctgcatatcgtggtccatgct
gatgaactcgaggagctcattaactactaccaggaccgtggctatttcgaggagctgatc
accatgttggaggcggctctggggctcgagcgtgctcacatgggaatgttcactgagctg
gccatcctctattccaagttcaaaccacagaagatgagggagcacctggaactcttttgg
tccagagtcaatattcccaaggtcttgcgggcagcagaacaggctcatctgtgggccgag
ctggtcttcctttacgacaagtatgaagaatacgataacgctatcatcaccatgatgaac
cacccttcagatgcctggaaggagagccagttcaaagacattgttactaaggtggctaac
gtggaactgtattacaaagccatccagttctacctggagttcaagcctctgttactgaac
gatttgctcatcgttctgtccccaaggcttgatcatacacgtgctgttaactacttctct
aaggttaaacagctgcctctggttaaaccgtacctgcgatctgtacagaaccacaacaac
aaatcagtcaatgaagcactaaacaatctcttcataatcgaggaggactaccaggctctg
cgtacatccatcgatgcctatgacaactttgataacatatctctggcccagagcctggag
aagcacgagctcattgagttcaggagaattgctgcctaccttttcaaaggcaacaaccgc
tggaagcaaagcgtggagctctgcaagaaggataaactctacaaggatgccatgcagtat
gcgtccgagtcgaaggacaccgagctagccgaagagctgctgcagtggttcctacaggag
gagaagaaggagtgctttgccgcctgcctcttcacgtgctatgacctcctgcggcccgac
gtggtgctggagacggcctggaggcacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtacctcagcaaggtcgataagctggacgcgtctgagtctttgagg
aaagaggaggagcaggccacagaggcacaacccattgtttatgggacgccccagctgatg
ctcactgcaggcccaagtgtcgccgttcctcctcaacagccttatggctatggttacggc
gcccccgctggctatggtcagccagcgcagcccggcttcggctacagcatgtag
DBGET
integrated database retrieval system
