Ictalurus furcatus (blue catfish): 128621084
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Entry
128621084 CDS
T09387
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128621084 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128621084 (u2surp)
Spliceosome [BR:
ifu03041
]
Complex A
U2 snRNP components
U2 related factors
128621084 (u2surp)
Complex B
128621084 (u2surp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
DUF2299
Motif
Other DBs
NCBI-GeneID:
128621084
NCBI-ProteinID:
XP_053502539
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All DBs
Position
17:27282955..27297050
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AA seq
954 aa
AA seq
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MADKTPGGTPKASSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANATKEEATVDDKRGKLYKPKSKILEAKTFLPLETPPQFL
TLDKRNALKKAEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPNVEGRRSFL
DESAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARER
NCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPP
SGLPFNAQPKERLKNPNAPMPPPPKNKDEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFV
VREGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTEDFRLFK
NGSLWRPPPLNPYLHGTPQEEEEEENEDEEEEGIKKGSLKDDERDKLEEILRGLTPRRSD
VAEAMLFCLTRADAAEEIVECITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYY
RKFFEIKLCQIFSDLNATFKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQNIF
LGLVSLDPEKEAEVSEPTEQVEDLDGAPIVEEELDGAPLEDVDGTPIDGAPLDGAVLDDL
DGVPIKGSEEELDGLPLDGQKPGFKMAPSKWEEVDGSALQAQAITTSKWEVFDLPEESEK
SGERKTHEGDVKETVKSSSSELQSQPAKEEHQQDSKSAKLSEMSEEKRAKLREIELKVMK
FQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKEVEKDKEKEKEKKDKDKSDVTHKE
KEKEDSSSNRKEKKRRHSPSPSPSRSSSARRVRSPSPRSERSDRSHTKDSSRSTYRDSPR
DSSRKSSKRSPSPSATPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHKKSKKSKH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcgggacgccgaaggccagctccaaggctttgctggaaagt
aaactgaaggccttcagcatcgggaaaatggctgtggctaaaagaactctgagtaaaaag
gagcaggatgaactgaagaagaaggaggacgagaaagcagctgcagaaatctatgaggaa
ttcctggctgcctttgagggaggtgaagggcgagtgaaaacttttgtccgaggaggaatc
gccaacgctactaaagaggaagctacagtcgatgataagagaggaaaactttacaaaccc
aaatccaaaattctggaggcgaaaacatttttaccgctggagactccgccccagtttctc
accttagacaaacgcaacgctttaaagaaagcggagaaagagaagaaaaagagcaacctg
gagcttttcaaagaagagctgaaacaaatccaggaggagcgggatgaacgccaccggatg
aagggacgagtcagtagatttgagcctctgcccaacgtggagggaagacgctccttttta
gatgaatctgctccaggctcacatgatgttggagatcctacaaccacaaacctgtacctg
ggaaacataaaccctcagatgaacgaggagatgttgtgtcaggagtttggacgctacggg
ccgttggcgagtgtgaagatcatgtggcccaggactgatgaggagagagcccgagagaga
aactgtggttttgtggccttcatgacgaggagagatgcagaacgagcgcttaaacactta
aatggaaaaatgataatgaactttgaaatgaagctgggatggggcaaaggcgtgccaatt
cccccccaccccatctacatccctccatccatgatggagcacacgctccctcctccacct
tctggtctgcccttcaacgctcagcccaaagagaggctgaagaaccccaacgcccccatg
cccccacctcccaagaacaaagacgagttcgagaagactctgtcgcaagccatagtcaaa
gtggttatcccaacagaaaggaatttgctctctctaatccaccggatgatcgagtttgtg
gtgcgtgaaggtcctatgtttgaggccatgatcatgaacagagaaattagcaaccccttg
tacaggtttttatttgagaatcagagcccggctcacgtgtattatcgttggaagttgtat
tccatcctgcagggagattctccgactaagtggaggacggaggacttcaggttgtttaag
aacggctcgttgtggcgaccgcctcctctgaacccgtacctgcacggcacacctcaggag
gaggaggaggaggagaatgaagatgaggaggaagaaggcatcaagaaaggatctctgaaa
gacgatgagagagataaactagaggagattctgcgaggtctcacccccaggaggagtgac
gttgcggaggccatgctgttctgtctcactcgcgctgacgctgcagaggagattgtcgag
tgcatcacagagtctctgtccatcctgaaaaccccgcttcctaaaaagattgcgaggtta
tatttggtgtctgatgtgttgtataactcctcggctaaagtcgctaacgcctcctattat
cggaaattctttgagattaaactgtgtcagatattctctgatctcaacgccacctttaag
acgatacagggccacttacagtctgagaattttaagcaaagagtgatgtcatgtttccga
gcgtgggaggactgggccgtgtatcctgatccgttcctcatcaaactccagaacattttc
ctgggtctcgtcagtctcgatcccgaaaaggaggcagaagtgtctgagcccactgaacag
gttgaggatttggatggtgcccccatcgtggaagaggagttggatggagcacctttagag
gatgttgatggaacaccaatcgatggagctccactagatggtgctgtactggacgacctg
gacggggttccaataaaaggatcagaggaagagctggacggccttcctctggacggacag
aaacctgggtttaaaatggctccatctaagtgggaggaagtggacggatctgctctccag
gctcaggctataactacgtcaaagtgggaagtcttcgatttgccagaggagtctgagaaa
agcggcgagaggaaaacacacgagggtgatgtgaaggagactgtgaagagttcctcgtca
gaactgcagtctcagcctgctaaagaggaacatcagcaggactctaaatcggccaaactt
tcagagatgagtgaagagaaacgcgctaagctacgggagattgagctcaaagtgatgaag
tttcaggacgagctggaatccggaaaacggcccaaaaaatccggccagagtattcaggaa
caggtggagctgtacagggacaaactactgcagagggaaaaggaaaaagaagtggagaaa
gacaaagagaaggaaaaagagaaaaaggacaaagacaaatctgatgtaactcataaagag
aaggaaaaagaggactcctcgtccaacagaaaagaaaagaagcgcagacacagtccgtct
cccagtccgagtcgcagcagcagtgcccgccgtgtccgatctccatcaccgcgctctgag
cgctccgaccgctctcacaccaaggacagctcacgctccacctacagagactcgcccaga
gacagcagccgaaaatcctccaaacgatcaccttctccctccgccacacccaaacgctcc
cgcaggtccagatcacgaacgcccaaaaaatcctccaaaaaatcccgctcccgttcccgc
tcaccacaccgctcacacaaaaaatccaaaaagagcaaacactga
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