KEGG   Ictalurus furcatus (blue catfish): 128621110
Entry
128621110         CDS       T09387                                 
Symbol
cul5a
Name
(RefSeq) cullin-5a isoform X1
  KO
K10612  cullin 5
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128621110 (cul5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ifu04121]
    128621110 (cul5a)
   03400 DNA repair and recombination proteins [BR:ifu03400]
    128621110 (cul5a)
Ubiquitin system [BR:ifu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     128621110 (cul5a)
DNA repair and recombination proteins [BR:ifu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128621110 (cul5a)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 128621110
NCBI-ProteinID: XP_053502573
LinkDB
Position
17:complement(6888248..6910341)
AA seq 780 aa
MAMSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPDDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLM
DKVPSGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPQVSSPKDF
TDSTLFFVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgatgtctaatttgttaaagaacaaagggtccctccagtttgaggacaagtgggat
ctgatgcgtccaattgtcctgaagttacttcgccaggagtctgtaacgaagcagcagtgg
ttcgatctgttctcagacgttcatgcagtctgtctatgggatgacaaaggcccagcaaag
attcaccaggctcttaaggaggacattttagattttataaagcaagcccaggcgagggtg
ctcagtcaccaagatgacacggccctcctcaaggcttacatcgtggagtggaggaagttc
ttcactcagtgtgatatactacctaagccattttgccagcttgagatcactctgatgggg
aagcaaggcagcaacaagaagtcgaacgtcgaggacagcatcgtgcggaagctgatgttg
gacacttggaacgaatccattttttccaacatcaagaacagactgcaggatagtgcaatg
aagctggtccatgccgaaagactcggagaggctttcgactctcagctggtcatcggagtg
cgcgagtcttatgtgaacctgtgttccaaccccgatgataagctgcagatctacagggat
aattttgagaaggcctacctggactccactgagaggttctacaggacacaggctccttcc
tacctgcaacaaaatggagtccaaaactacatgaaatatgcagacgctaaattaagggag
gaggaaaaacgtgcactacgctatttagagacacgacgtgaatgtaactctgttcaagca
cttatggaatgttgtgtaaatgcactggtgacgtcattcaaagaaacaatcttggcagaa
tgtccaggcatgattaaacgcaatgagactgacaagcttcacctgatgttctcactgatg
gataaagtacccagtggaattgaacccatgcttaaggatctggaggaacacatcatcagt
gctggcctggccgacatggttgctgctgctgagacgatcacgacggattctgagaagtat
gtggagcagcttctcactctgttcaaccgctttagtaaacttgtgaaggaggcgttccag
gacgatcctcgattcctcacagccagagataaagcgtacaaagcggttgtgaatgatgcc
acaatatttaagttggagctacctttgaaacagaagggagtgggcctcaaaacgcaaccc
gagtccaagtgtccagagctgctagccaactactgtgacatgctgctgaggaagacgcca
ctcagtaagaagctcacgtctgaggagatcgagctgaagttaaaagaagtgttgctggtg
ctaaaatatgtccagaataaggacgtgtttatgaggtaccataaagcccacctgaccagg
aggctgattctggacatctccgctgacagcgagattgaggagaacatggtcgaatggctc
agggaagttggtatgccggccgattatgtcaacaagctagctagaatgttccaggacatc
aaagtctcagaggatctaaaccaggtcttcaaggagatgcataaacacaacaagcttgct
ttaccagctgactccgtaaatataaagatcctgaatgctggagcatggtcgcgcagctca
gagaaggtctttgtttcacttcccactgagctggaggacctcattcctgaagttgaagac
ttttacaaaaagaatcacagtggcagaaagctgcactggcaccacctcatgtccaatggc
attatcacatttaagaatgaagtgggtcagtatgacttggaggtcacaaccttccagctg
gctgttcttttcgcctggaaccaaagacctagagagaagatcagctttgagaacttgaag
cttgccactgagctgcctgatgcagagctgagacgcacactctggtctctcgttgccttc
ccaaaactcaaacggcaggtgctttcatatgaacctcaagtgagctctcccaaagacttc
acagatagtacattgttcttcgttaaccaggaattctccttgataaaaaactccaaggtg
cagaagagggggaagattaacctgattggccgcttacagttgactacggagcgaatgaga
gaggaagagaatgaaggcattgttcaactaagaatattaagaacacaggaggccattata
caaattatgaagatgcgaaagaagatcactaatgcccagctgcagaccgagctagtggag
atcctgaaaaacatgttccttccccagaagaagatgatcaaggagcagatcgagtggctg
attgagcacaagtacatcaagcgtgatgagacggacattaacaccttcatctacatggca
tag

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