Ictalurus furcatus (blue catfish): 128621155
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Entry
128621155 CDS
T09387
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128621155 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128621155 (msi2b)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128621155 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
128621155
NCBI-ProteinID:
XP_053502678
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All DBs
Position
17:complement(13526398..13787555)
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AA seq
404 aa
AA seq
DB search
MEGDGSQATSGSPTDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPMAAAAVAAARGSGFPDYGFYSTTSDQRGPPFSFADYGSLGPQAAQLLQS
EHATSACNSPLQHLPSPDQYKSPGTNPPRPGTFPGASSPGPVADLYGPTSQDSGVGNYIS
AASPQPGSGFGHSIAVTAIQLQALQHGTDKDELRWQDLTNKRNV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacgtccgggagtccgaccgattcgcaacacgaccca
ggtaaaatgttcatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaatttggagaaatccgagaatgtatggtgatgagggatcccacgaccaagcgc
tccaggggatttgggtttgttacgtttgcagatgcggccagtgtagataaagttttaggt
caacctcaccacgaattagactcaaagacgattgaccctaaagttgccttcccgagacgt
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagcgaac
acagtagtcgaagatgtgaagcagtatttcgaacagtttggcaaggtagaggatgccatg
cttatgtttgataaaactacaaataggcatagaggatttggctttgtaactttcgagaat
gaggatgtggtggagaaagtctgtgagattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcacaacccaaggaggtgatgtttcccccagggacacgagggcgagcc
aggggtctaccctacaccatggatgccttcatgctaggaatgggaatgctgagttaccca
aacattgtagcgacgtacggccgtggatacactggcttcgccccgagctacagctaccag
ttccctggctttcctgcggcagcgtatggtccgatggcggcagcggcagtggcagcagca
cgtggttcaggcttccccgattacggtttctattccacgacaagtgaccaacgggggccc
cccttctcctttgcggactatggctctctaggcccacaggcggctcagctgcttcaaagc
gagcatgccacctcggcctgcaactcccccctgcagcacctgcccagcccggatcagtat
aagagcccaggcaccaaccctccgcggcctggaacttttcctggagcgagcagtccagga
cctgtggctgacctgtatggccccaccagccaggactctggcgtgggcaattacataagc
gctgctagccctcaacctggctccggcttcggccacagtattgctgtaacggccatacaa
ctccaagcactacagcatggaacagacaaggacgagctgagatggcaggatctgacgaac
aaaagaaacgtctga
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