Ictalurus furcatus (blue catfish): 128621294
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Entry
128621294 CDS
T09387
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128621294 (ptbp2b)
Spliceosome [BR:
ifu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128621294 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128621294
NCBI-ProteinID:
XP_053502926
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All DBs
Position
17:complement(19608951..19630425)
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AA seq
518 aa
AA seq
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MDGIASDVAVGVKRSSDDLLSGSLYSSPNTSVKANGSDSKKLRVEDSMENPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNVP
VCIQYSNHKELKTDSALNQRAQAVLQAVCAVQEGGSPSSDSAGESVLIPPPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAADGQPSVDPAMAAALGKDSTSLLGSIS
PLSAAAAAAAAAGRVALSGHSAAGAVLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMTDGNQAQLAMSHLNGQKMFGKIIRVTLSKHQTVQLPREGLDDQGLTKDFIN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPEKVNEEDLRLLFSNSGGTVKAFKFFQDRKM
ALLQMATVEEAIQALIDLHSYDMGRGHRLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgctagtgatgttgcagttggtgtaaagagaagttcagatgatttgctt
tctggcagtctttacagcagtccaaacacttcagttaaggctaatggaagtgacagcaaa
aaactgcgagtggaggacagcatggaaaacccgccctcgagagtcattcacattcgtaaa
ctcccgaacgaggtttctgagacagaagtcattgccttgggcctaccctttgggaaagtc
accaatatcctgatgctgaaaggcaaaaatcaggcatttttggagctcgggacagaggaa
gcagcgatcaccatggtgaactactacacagcagtgacccctcaagtgcgaaatgttcct
gtgtgtatccagtactccaaccacaaagagctcaaaacggacagtgcactcaatcagcgt
gcccaggccgttctgcaggcagtgtgcgccgtacaggagggaggttctccgagctcagat
tcggcaggagagagcgtgttaataccgccgccaagtccggttttgcgcatcatcatcgat
aacatgttctacccggtaacactggacgtcctgcagcagatcttctccaagtttgggaca
gtgatgaagataatcacattcaccaaaaataatcaattccaagcgctgctgcaattcagc
gagcctgtaaatgcacaacaagccaaactgtctttggatggacagaacatctataactcg
tgctgcacgctgcgcatcgacttctccaagctggtcaacttaaacgtgaagtacaacaac
gataagagtcgagattacacaagacccgagctgcctgcagcagacggtcagccttctgta
gatccagcgatggccgctgcacttggcaaagactccacatccctgcttgggtcgatcagt
cctctaagtgcggcggccgcagcagcagcagcagctgggcgggtcgctctgtcaggacac
tcggcggctggtgcagtgctgctagccagcaatctcaatgatgagatggttacgccccaa
agtctctttaccctcttcggtgtgtatggggatgtgcaacgtgtcaagatcctctataat
aagaaggacagcgccctcatccagatgaccgatggaaatcaggctcagcttgccatgagc
cacctgaatgggcagaagatgtttgggaagatcatccgtgtgaccctttccaaacaccag
actgtgcagcttcctcgagaaggcttggatgatcagggcctcactaaagacttcatcaat
tcaccccttcatcgtttcaaaaagcctggctcaaagaatttccagaacatctttcctcca
tcagccactctccatctttccaacatccctgagaaggtgaatgaagaggacctgagactt
cttttctccaactctggaggcacagtgaaggccttcaagttctttcaagatcgcaagatg
gcccttctgcagatggcgacggtggaggaggccattcaagccctgatcgacctccatagc
tatgatatgggccgtggccatcgcctcagagtctccttctccaaatccaccatatga
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