Ictalurus furcatus (blue catfish): 128621326
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Entry
128621326 CDS
T09387
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128621326 (rffl)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128621326 (rffl)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128621326 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
FYVE
MUG2_C
zf-C3HC4_2
SDE2_2C
DUF7573
Motif
Other DBs
NCBI-GeneID:
128621326
NCBI-ProteinID:
XP_053502998
LinkDB
All DBs
Position
17:15024593..15047911
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AA seq
349 aa
AA seq
DB search
MWASCCNWLCLDSPTVEESSSRRSSSRHQAYTNSGYSSSSNSSPTAPEHTCKACGGRFDT
LERKHVCVDCKKNYCSRCSAQLEPHPRLCHTCQRFHGTMFERAELMKLKVKDLRDYLHLH
EVPTQMCREKEELVELVLGQQTPTSDASTPSETHAHTPLSEQEMISEPTPITEQPSPGSG
VMTDLTSQSQTAGDEQIESVQEEPVDVEETELQGEQECQSSDSDEALPLGRRASLSDISS
VEDIEALTVRQLKEILARNFVNYKGCCEKWELMERVTRLYNDQKDLQNLDSTAAPTMEEH
LCKICMDSPIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagttgttgtaactggctctgtctggactcacccaccgtggaggaaagcagc
agccgtagatcaagctcacgccatcaggcgtatactaactcaggctatagcagctctagt
aactcatctcccacagctccagagcacacatgtaaggcatgtggaggccgctttgacact
cttgaaagaaagcatgtatgtgtagactgcaaaaagaattactgtagtcgctgctccgct
cagttagagcctcatccgcggctgtgccacacgtgtcagcgtttccatggtaccatgttt
gagcgggcagagctgatgaagctaaaagtaaaggacttgcgggactaccttcatttgcat
gaagtccctacgcaaatgtgcagagagaaagaggaacttgtggagcttgtccttggtcag
cagacccctacctctgatgcatccacaccaagcgagacacacgcacacacacctttgtct
gagcaggaaatgatctcagaaccaaccccaatcacagagcaaccctctccagggagtggt
gttatgaccgacctgacttcccagtcacagactgcaggggacgagcagattgagtcagtg
caagaggagccagttgatgttgaggagacagaacttcagggggaacaggaatgccagtca
tcagactctgatgaggcgttgcccttgggtcggagggcatctctctcagacatttcgtca
gtggaggatattgaggctctgactgtgcgtcagttaaaggaaatcttagccaggaacttc
gtcaactacaagggctgctgtgaaaaatgggaactgatggagcgagtcacacgcctctat
aatgaccagaaggatctgcagaacttagattctacagcagcgcccaccatggaagaacac
ttgtgtaagatctgcatggactcgccaatcgactgtgtgcttctggaatgtggacacatg
gtcacgtgcacaaagtgcggcaagcgcatgagcgaatgccccatctgcagacagtatgtg
gtccgggccgtgcacgttttccgatcctga
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