Ictalurus furcatus (blue catfish): 128621343
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Entry
128621343 CDS
T09387
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128621343 (vps53)
Membrane trafficking [BR:
ifu04131
]
Protein recycling
Others
EARP complex
128621343 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
128621343 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Syndetin_C
NBD94
GrpE
Sec8_N
FBF1
Laminin_II
COG5_N
VPS51_Exo84_N
COG3_N
ING
Motif
Other DBs
NCBI-GeneID:
128621343
NCBI-ProteinID:
XP_053503017
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All DBs
Position
17:complement(11971503..11995495)
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AA seq
831 aa
AA seq
DB search
MMEDEELEFVEDLDAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRNLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFDEAFPAQGSKRPGGPSIVLRD
ACLVANVLDPRIRQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYSRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLSNGPAKRPEMPLEPTNPFLEDESGEDNVSEKDEDLVRPKKPKTPENPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTISSLLKEKEGSEVA
KFTTEELCLICSILSTAEYCLATTQQLEEKLKEKVDKPLMERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLAATRKY
FTQFCIKFINSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPTIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGPDTGPSMSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatgaagagttagaatttgtggaggatttggacgcaattttacaccttacc
cccgaagtgcagctagccatcgaacaggtgtttcccagtcaggacccactcgatcgagct
gatttcaatgcagttgaatacatcaacactttgtttccaactgagcagtcactcgcaaat
atagatgaagtggtgaataaaattcgcctgaaaatcagacgactggatgacaacatcagg
acggtggtgaggggacaaactaatgtgggacaggatggcaggcaggctctggaggaggct
cagatagccatccagcaactgtttggcaaaatcaaagacatcaaggacaaagcggagaaa
tcggaacaaatggtaaaagagatcacccgggacatcaagcagctggaccatgcaaagcgt
aacctaaccacgtccattactacccttaatcacctgcacatgctagcaggaggtgtggac
tctctggaggccatgacacgcaagaggcagtatggggaggtggccaacttgctccaggga
gtggtcaacgtgctggagcacttccaaaagtatatgggcatccctcagatccgccaactg
tctgaaagagtgaaagcagcacaaagcgagctaggcacacaaatcctagctgactttgat
gaggcttttcctgcacagggctcaaagaggcctggaggccccagcattgtgctcagagat
gcctgtttggtggccaatgtcctggatcctcgcattaggcaggaaataatcaagaagttc
attaggcagcatctctctgagtaccttgtgctctttcaagagaaccaggatgtggcatgg
ttagataagattgaccggcgctatgcatggataaagcgtcaactagtggactatgaggag
aagtacagccgcatgttccctgaagagtggtgcatgaccgagcgtatagctgtggagttc
tgccatatcaccaggactgagttggccaagttgatgcgagctcgtgccagagagattgag
gtcaagctcttgctctttgctattcagaggaccaccaatttcgaggggttgctggctaag
cgcttctcaggcagcaccttgagcaacggcccagcgaagagaccggagatgcccttggag
cccactaacccttttctggaggatgagtcaggagaggacaatgtttctgagaaggatgaa
gatctggtcaggccgaagaagcccaagaccccagagaacccgttccacggcattgtttcc
aaatgcttcgagcctcatctctatgtctatatcgaatcacaggacaagaacctcggcgag
ctgattgaccgctttgtggctgatttccgagcgcagggtcctcctaagtcgggcaccgaa
gaagggggagctgtgttgcccagctgtgcagatctctttgtatactataaaaagtgcatg
gtgcaatgctctcagctgagcacaggagagcccatgatcgccctcactaccatcttccag
aaatacctgcgcgagtatgcctggaagatcctgtctgggaacctgcccaaaacaagcagt
aacagtggaggtttaaccatcagcagtctattaaaggaaaaagagggttcggaggtggcc
aaatttaccacagaagagctctgtcttatatgcagtatcctcagcacagccgaatactgc
cttgctaccacacaacagctggaggagaagctaaaggagaaagtggacaagccgcttatg
gagaggattaacctaacaggagagatggacacctttagcactgtgatctccaacagcatc
cagcttttagttcaggatctggatgctgcatgtgatccagccctcacagccatgagcaag
atgccatggcagagtgtggaacatgttggtgaccaaagtccctatgtcacttctgtcatc
atgcatattaaacagaatgtaccaatcatcagagacaacctggctgccacccgcaaatac
ttcactcagttttgcatcaagttcatcaactcctttattccaaagttcatcaaccacctg
ttccggtgtaaacccatcagcatggttggagctgagcagcttctattggacacacactct
ctgaagactgttttgttagacctcccaaccattggctctcaagtccttcgcaaagctcca
gcgagttacactaaaatagtggtcaaagggatgactcgggcagagatgattcttaaggtg
gtcatggcccctcatgagccgtcagtggtctttgtggataattatatcaagcttcttgct
gatggcaacccagagactttccagaaaattctagacatgaagggactgaagcgcagtgag
caaagcagtatgctggagctcttcagacagaggttacccactcccccctcagggccagac
acaggaccctctatgtccttcagcgctccaacccctgagcaggagtcctcacgcatccgc
aaacttgaaaagctcatcaaaaaacgaattcagtga
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