KEGG   Ictalurus furcatus (blue catfish): 128621373
Entry
128621373         CDS       T09387                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128621373 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ifu01009]
    128621373 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ifu03400]
    128621373 (pnkp)
Enzymes [BR:ifu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     128621373 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     128621373 (pnkp)
Protein phosphatases and associated proteins [BR:ifu01009]
 HAD phosphatases
  Other HAD phosphatases
   128621373 (pnkp)
DNA repair and recombination proteins [BR:ifu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128621373 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase
Other DBs
NCBI-GeneID: 128621373
NCBI-ProteinID: XP_053503068
LinkDB
Position
17:5218050..5229051
AA seq 592 aa
MQCVLVSAAGTRLQLPHGRALILGRGPESGVKDKKCSRHQVKLVADYDKQEILVTQLGPN
PSSVDGQALGRGQSGRLSLTSTLYLVNQSYPFTVQFSGSANGASSASRQSKGKQADDKES
KQKVLDSNDKKVQPKRNIQDFFVSSPKKSTKRALDSEDDAPEAKRGRTEKSDEDEENLME
EKLRQLQQFAEDKSTRQSPSKPSAAAPSACVNSHWKQIGNLMLYTAAGVTGSAKIAGFDI
DGCIITTKSGKVFPTSPDDWKILFPEIKPKLTTLLKEGFKVVFFTNQMGIARGKLRPEVF
KSKVEDILQTLNVPVQVFVAAGPGIYRKPVTGMWEHLCEQANDGITVDKSQCVYVGDAAG
RPVNWAPGKKKKDFSCSDRLFALNIGLEFHTPEEFFLGWKAAPFNMPSFDPRELDPKARL
YDPPNASLTSTSQEIIVAVGFPGSGKSTFFQTHIIPKGYVYVNRDTLGSWQHCVSACERA
LKEGRSVAVDNTNPDLESRKRYVDVSKSAGVPCRCFNFTTSLEQAKHNNRFREMVPSATK
HAPVNDLVFHSYKKKFAAPTLSEGFSEILQIHFVPSFTDSRSEALFRQFSEG
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgcagtgtgtactggtgagtgcagcgggaacacggctacaactgccccacggtcgggcc
ctgattctgggtcgcggtcctgagtccggagtgaaggataaaaaatgttccagacaccag
gtcaaacttgtggctgactatgacaagcaagagattcttgtcacacagcttggtccgaac
ccatcttctgtggatgggcaggctttgggtcgcggtcagtctggacgcctgagtttaacc
agcacactctaccttgtaaaccagagttaccccttcactgtgcagttttctggctcagct
aacggagcctcttcagcctctcgccagagtaagggaaaacaagcagatgataaggaaagt
aagcagaaggtcttggatagtaacgataagaaggttcagcctaagcggaacatccaggat
ttctttgtttcttcacctaaaaagtcaacaaaaagagcccttgattccgaagatgacgca
cccgaagctaaacgcggccgcactgagaaatctgatgaggatgaagagaacctgatggag
gagaagctcagacagctgcagcagtttgcagaagacaaaagcacacggcaatcaccatca
aaaccctcagccgctgccccgtctgcctgcgtaaacagtcactggaagcagattggtaat
ctcatgctctacaccgcagcaggggtcactggaagcgccaagatcgcagggtttgatatt
gatggctgcattatcactacaaagtcagggaaagtctttcccaccagccccgatgactgg
aagatccttttccccgagataaaacccaaactgaccactctgttaaaagaagggttcaag
gtggtgttttttaccaatcagatgggaattgctcgaggcaagctcagaccagaggtgttc
aagtctaaagttgaggatattcttcagacattgaatgtgcctgtgcaggtgtttgtcgca
gcaggtccaggtatttacagaaagccggtcacaggaatgtgggaacatttatgtgagcag
gcgaacgatggaataactgtggataaatcccagtgtgtctatgttggagatgcagcaggc
cgtcctgtaaattgggctccagggaaaaagaagaaggacttctcctgtagtgacaggctg
tttgctctaaacattggtctggaatttcacactccagaggaattcttcctgggatggaaa
gctgctccgttcaacatgccgtcatttgatccgagggaactagacccaaaggcacgtctg
tatgaccctcctaatgcctcgctgacttctaccagccaagaaataattgttgctgttgga
ttccctggatctggcaaatccacttttttccaaacccacatcattcccaagggatatgtg
tatgtgaacagggacacactggggtcatggcagcactgtgtgtcagcgtgtgaacgtgct
ctgaaggaaggccgaagcgtagctgtggacaacactaatcctgacctagagtctcgaaag
cggtatgtagacgtcagtaagagtgctggagttccctgccgatgctttaacttcaccacc
tctttggagcaagccaagcacaataacaggttccgagagatggttccttcagccaccaag
cacgctcccgtcaatgacctggtcttccacagctacaagaagaaatttgcggctcctact
ctatcagaaggcttctctgaaatcctgcagattcactttgttcccagttttactgacagt
cgctctgaggcgcttttcaggcagttctcagagggttga

DBGET integrated database retrieval system