Ictalurus furcatus (blue catfish): 128621437
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Entry
128621437 CDS
T09387
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ifu03000
]
128621437 (npas1)
Transcription factors [BR:
ifu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128621437 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
128621437
NCBI-ProteinID:
XP_053503176
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Position
17:17230147..17275998
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AA seq
767 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRHFASQGDPPWSPLLEGDNNCNKVRRNSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRTEAGCQTAQESASSSASTSSLAGTPEPAPSSPLSSGDEPVERGFF
VRMKSTLTKRGLHVKSSGYKVRVIHVTGRIRCRPALVPGSSRSLHRPLGLVALAHTLPPS
TLNEVRMESHMFVFRVNMDLQITYCENRISEYMDLSPAEVVGHTCYHFIHVEDLDTIRQS
HEDLLRKGQVVTGYYRWLQRRGGYLWVQSCATVSINHKAPHERNVIWVNYILSRTEMPDM
PLDLLQLPETLKAERLRASSSTRDISPKSHGPNGAQPTKGGLGRNESERKGRDSCTHITA
NHSENRRKRPYHSSPENTPPQTRRQQLEVFRHREDSLSGSSDSASDSEAEEDEEEDKEEE
WEHNGKRLKTDAGASKKNSETGKVRNGRAVIQQLKSVVTSTSSSNVKTEQEMLSTGVCST
TGGRWSNTQSARGINGSSPPSQDSESVTTEAPAKGLFSPPSPISASPLPREDRLHGGRTP
DYELLQRLAAGGAAGRVLFHPLALGPPGPQSLYAPSTIRYAPPELPTAHAEGPRLDHAPK
SPTFFPHLQRIAALPPFSGFSPSEPPFAPSLPFCMNGLRGAAGTDED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatgccgttcgtcagtgagggaaagtgtgttagtgtggagtgggacttcctg
caaggactcctcgctaaaccacccaccttgccctgtttacaaaacctgcggaaggagaag
tcccgaaatgcggctcgctctcgtcgcggtaaagagaactttgagttttttgaactggcc
aaaatgctgcctctccctggcgccatcaccagccagctggacaaggcttcggtcatccgc
ctgaccatcagctacctgcacatgaggcattttgccagtcagggagacccaccctggagc
cccctgctggagggggacaataactgcaacaaggtgcggagaaacagtcactcactggcc
actgatatatttgagcagcacctcggagcacatctactacagtctctggatgggtttgtg
tttgtggtcagtcaagaaggccgtttcctctacatttctgagacagtgtcgatctacttg
ggcctctcacaggtggaattaacaggcagtagtgtgtttgactacatacatcctgcagac
catgtggagatggcagagcgattgggaattaaaccacacctccgcacagaggcaggctgt
cagactgcccaggaaagtgcttcaagttccgcctccacatcctcattggctggcacacct
gaaccagccccctccagtccgctgtcatctggagatgaaccagtagagcgaggtttcttt
gtccgaatgaaatccacccttactaagcgcggcctacatgtcaaatcctctggttataag
gtgagagtgatccatgttactggccggattcgctgtcggccagccctggtcccaggctct
tcacgctcactccatcggccactgggattggtcgctcttgctcacacacttccgccctcc
acgcttaatgaggtgcgcatggagagtcacatgttcgtgtttcgggtcaacatggatctc
cagatcacctactgcgagaacaggatctcagaatatatggacttgagcccagctgaggtg
gtggggcatacctgctaccacttcatccatgtggaagacctagataccatccggcaaagc
cacgaagacttgctgaggaagggtcaggttgtgactggttactaccgctggctgcagagg
agaggcgggtatttgtgggttcagtcgtgtgccactgtgtccatcaaccacaaagcaccc
catgaacgtaacgtcatctgggtcaactacatactcagtcggacagaaatgcctgacatg
ccactggatttactacagctcccagaaaccctgaaagctgagcgtcttcgggcaagctct
tccactcgtgatatctctccaaagtcacatggcccgaatggtgcccagccgacgaagggc
ggacttggacgaaatgagtctgagcgcaaagggagagactcttgtactcacattactgct
aaccattcagagaacaggaggaagaggccttaccactccagccctgaaaacacacctcca
caaacaaggagacaacaactcgaggtcttccggcatagagaggacagcctgtcaggctcc
tcggactcagccagtgacagtgaagctgaagaagacgaagaggaggacaaggaagaggag
tgggagcacaatggcaagagactgaagaccgatgcgggagcctctaagaagaacagtgaa
actgggaaagtgcgtaatggtcgtgctgtaatccagcagctgaagagtgtggtgaccagc
acctccagctctaacgttaaaactgagcaggagatgttgagcactggagtttgttcaacc
actggagggcgatggagcaacactcagtccgccaggggtataaatggcagcagcccccca
tcccaagattccgagtcagtcactacagaagctccagctaaaggtcttttcagccctcct
tcacccatctcagcttcacccctgcctagggaggatcgcctccacggaggccgcacgcct
gattacgagcttcttcagagactagctgcgggtggagcagccgggcgtgtactgttccac
cctctcgctctcggccctccagggcctcagagcctttacgctccgagcaccattcgctac
gcccctccggagctgcccactgcccatgctgaggggccacgcctggaccacgcgcccaaa
tcgcccactttctttccacacctgcagagaatcgctgctctaccacccttcagcggcttc
tcaccttcagagcctccctttgctccatcccttcccttctgcatgaacggactgagagga
gcagcagggacagatgaggactga
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