Ictalurus furcatus (blue catfish): 128621473
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Entry
128621473 CDS
T09387
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ifu03016
]
128621473 (cdkal1)
Enzymes [BR:
ifu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
128621473 (cdkal1)
Transfer RNA biogenesis [BR:
ifu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
128621473 (cdkal1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
128621473
NCBI-ProteinID:
XP_053503283
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All DBs
Position
1:1169219..1376491
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AA seq
564 aa
AA seq
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MPSSCDSLVDDIEDMVSSSEPAPLQRSSTRQSVVPRVRKRKDLLVNEELQVDSVIPGTQK
VWLRTWGCSHNSSDGEYMAGQLAASGYKMTDDPSDADVWLLNSCTVKNPAEDHFRNNIKK
AQEQNKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGPKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWELVKEIPEGCMLRLGMTNPPYILEHLEEM
AKILTHPRVYAFLHVPVQSASDSVLMDMKREYCCDDFTRVADFLRDRVPGITIATDIICG
FPGETDEDFQQTMELVRKYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSALFH
SYNPYDHKVGERQSVLVTEESFDAQYYVAHNKFYEQVLVPKKPEFKGKMMEVEIFEAGKH
FLRGRPVEESTAITPSISQPLEKGEISGLIQKRNTWCQNGVRAPLTPPASISRSRNPDGQ
GLKLLSVGLALLAIVVVFIFEKLQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccagctgcgactctctcgtcgacgatatcgaggacatggtgtcctccagcgag
ccggctcctctccagcgctcctccaccagacagtccgtcgttccccgagtgaggaaacgg
aaagatctcctggtgaacgaggagctgcaggtggacagcgtgatcccgggcacacagaaa
gtctggttgaggacgtggggctgctcacacaacagctcagacggggagtacatggctgga
caactggctgcgagcggctacaagatgactgacgacccgtccgatgcagatgtttggctg
ctgaacagctgcacggtgaaaaacccggcggaggatcacttcaggaacaacatcaagaag
gctcaggagcagaataagaaggtggtggtagcaggatgtgttcctcaggctcagcccagg
atggactacctcaaaggcctgagcattataggggtccagcagatcgatcgtgtggtggag
gtggtggatgaagcggtgaaaggtcactctgtacgtctactgggtccgaagaaagataat
ggcaagcggcttggcggtgctcgattggatttgccgaagattaggaagaacccgctgatt
gaaatcatttccatcaataccggatgtttgaatgcgtgcacgtactgcaagaccaagcac
gcgcgaggcgacctggccagttaccccatcgaagaactggtggaacgagccagacagtcc
ttccaggagggggtgtgtgagatctggctgaccagcgaggacacgggtgcttacgggagg
gacatcggcacggatctgcccacgctgctgtgggaactggtgaaggagatccccgagggc
tgcatgctccgcctgggcatgaccaacccaccctacatcctcgagcacctggaggaaatg
gcaaagatcctgacccacccgcgagtgtacgccttcctgcacgtccctgtccagtcagca
tcagacagcgtgttgatggacatgaagagagagtactgctgcgatgacttcacgcgcgtc
gccgacttcctcagggacagggttccaggcatcaccatcgccaccgacatcatctgcggc
tttccaggggagacggacgaggacttccagcagacgatggagctggtgagaaagtaccga
ttcccgagcctcttcatcaaccagttctacccacgacccggaactcccgcggccaagatg
gagcaggtcccggctcatgtgaaaaaacaaagaaccaaggagctgtctgcattgttccac
tcgtataacccgtacgaccataaggttggagagaggcagagtgtgttagtcaccgaggag
tcgtttgacgctcagtactacgtcgcccacaacaaattctacgagcaggttctggttccc
aaaaagccggagttcaagggaaagatgatggaggtggagatcttcgaggcggggaagcac
ttcctgcgaggtcgcccggtggaggagtccacagccatcacgccctccatcagccagccg
ctggagaagggagaaatatccggcctcatccagaaacggaatacttggtgccagaatggc
gtccgtgcccccctgacacccccagcgtcgatcagtcgctcacggaatccggacggtcaa
ggactcaagctgctctcagtaggattggctctgctggctattgtagtggttttcatcttt
gagaaacttcaatga
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