Ictalurus furcatus (blue catfish): 128621561
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Entry
128621561 CDS
T09387
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128621561 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ifu04091
]
128621561 (frem2b)
Lectins [BR:
ifu04091
]
C-Type lectins
Lecticans
128621561 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Orf78
TM_ErbB1
TMEM154
Myc_target_1
Protocadherin
Syndecan
Motif
Other DBs
NCBI-GeneID:
128621561
NCBI-ProteinID:
XP_053503397
LinkDB
All DBs
Position
17:24719758..24822908
Genome browser
AA seq
3110 aa
AA seq
DB search
MAQSIPKTTVWLFIISASLLTLPGVSCARGFDSLGLTYGHRSELSEDAILVANNGIRVPF
GRSVFIDPINDLVLQVRPGDKCTITVLDNDPLSQKPGQLSPKKFPCEFGPSDVKYSHFGS
RSPAKDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILIKNMPLTVEKLLGTSNVIDNK
ILEFTYDRNMYQCKVTSLAGTGVLPRYGKLVDEGKLGKMFDCDEFLRLNIRYRHTFTQRS
PNRDYIPMYVELQDKESNVIKQEFFQMMVRIKEGEENTPPKPSFISMMMMEVDQFVMSAI
TPDMLAAEDVESPPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLTDLKIAYRPP
SEDSDAERIFQIEFVVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQTRSLS
SSQNLQISDEDNLHDVKVTVIDGLRHGELTVIGSRSKFFTVADLDHGSVVYQHDGSDTYS
DNIIFRMTDGKHEVEFLFPITVVPTDDEPPIINANTGLLMFKNQMMPISPLMLSAADIDS
EDSTIKFILEAPFSSIGEVLLRQSDAPEDPSTWRFNSEDEMYEKVVTEWLQQDITDGKLF
YRHIGPHNTKTIMDQFVFRVQDDNDPPNRSGQNAFIIRILPIDDIPPELHPDTTLQLTVH
EYQLTFFRKKFLRYTDLDSEDRDLKYTITQPPRDTDENSPVILGAIVLAESPSTEVTEFT
QAQINHHKIAYKPPDLELGITPHVVQFHYTVEDTAGNSVDGAFTIFLQPVDNKPPQITNT
GFSVLERGIHVITRTELDTTDPDTDNTKISFTLTQPPLRGQIQYTFTDLTKGDSFNLDDI
SQGRISYSHNGDESTNDSFQLDVSDGVHVVTITVKINVKLIDDETPTISLPEGTIGSYID
VLENGATEITANVIQGRDEDTDDLRLTFIVEDPPVVGEILVNGVPAKRFTQADIINGLVV
YAHTSGEIGLTTKEDFFNLTLTDMSDEWTVGGNKIKGVRVHVTILPIDSQAPQVFVGHQF
SVVEGEKNVIQIAHISASDIDTPNDDLLCTIIVQPTSGYLENISPAPGSEKSRSGTAISA
FTIKDIKQNHIYYVQSIHKGLEPVEDRFTFRCSDGINFSERHFFPIVIIPSNDEKPEIHM
REFVVMEGMNVVIDTPILNGVDADIPTDELTFIVTKPPKHGFIINQLTTGTVPVTNFTLD
QIREASSIVYEHDDSETTEDSFKVLLTDGKFTVEKTVIIMVIPVDDETPRMAINDGLEIE
IGEIKEITNKVLKATDLDTKDRTLTYVIRYGPNQGILQKRTPFGTLQNITIGMNFTQSDI
DENMIIYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVISKGVSLKEGG
RVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGMPITSFTQLQLAGNKIYYI
HTADDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTIHRLVVNEGKSKLITPFE
LTVEDRDTLDRLLKFTVTQVPIHGKLLFNNTRTITSFTKQDLNENMISYKHDGTESASDS
FSFTVTDGTHSDFYVFPDTVFETRKPQVMKITILSVDNGIPQIVVNKGGTTLKTMLTGHL
GFVITSKVLKAEDRDSPHGAVTFRLTVGAEHGYLIDLGKGNATITTFTQADIDDMHICYV
LRNGDNATSDTFHFSIEDNGGNKLKNQQFRLTWAWISLEKEYYTVDEEAKFLEVVLRRRG
YLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQATATWKVRILGDHLYEQSETFQI
VLSEPVMGALEFPQTATVQIIDPEDESTVFIPSATYSIEEDVGEFLIPVRRSGDVSQELM
VVCFTQQGTATGTVPATVLSYSDYISRPEEHVSVLRFDRDEIEKACRVVVIDDSLYEPEE
SFNVSLSMPMGGRLGREFPTTRITILPDSDDAPVFYFGDLEYRVDESDGYVEVRVWRTGS
DLSMTGTVTVRSRKSDPISAEAGEDYIGISKNMDFAPGVTTQTIRVTILDDLGQPVLEGP
EKFELVLHMPMNGILGEPSKATVFINDSVSDLPKVQFRDAKYTGNENDGKITAIVFRSGD
LRYRSSVRCYSRQGSAQVMMDFNERPNTDASVITFLPGEVEKPCTLILVDDTEHEEVEEL
RLVLGSPKSESPFGASIGVQNETLIKIKDDADKAIIRFGVTKFSVSEPSEAGQVSVVKVP
VLRVGDTSKVSVVRVHTKDGSATSGEDYHPVSQDIEFKEGDTEHTVEVEILYDGVREMRE
AFTVHLKPDENMVAEIQMTKAIIYIEEGNTMADVTFPSVPVVISLLHYDGTVSAPESRPP
AGYPVICVTACNPRYPDFERTSTICASEGINNTLTRYRWLVSAPAGPDGVTSPMREVDFD
TFFTSSKRITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSAIFSVSVEEGMCQPRVIGA
VGAEPFSAKLRYTGPDDPHHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRVG
NHRCSNLLDYSEVRTRHGFITAATRNPEVIGGTAPYQYSATLRGESTLRFYRNLHLEACL
WEFVSYYDMSELLSDCGGSIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHFDL
QSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARFRGLFV
TSHPASPLTSMVMCTDHPGLTFNLSLVRSEPTYNQPMQQWTFVSDFAVRDYSGTYTVKVL
PCTAPPSLEYTLPPVCNPREPVAFDLDIRFQQVSDPVAAEFSLNTQMLLLSKRTLWLSDG
SMGFGQESDTAFSEGDIIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPDNYE
YGCLADAASLLYRFKIIDKAQPETQARAFGSVSFNALLAVDDPEALSLVRQPGSDGFRMD
STPLFQVSAGREWYIHTIYTVRSRDNANRGIGKRSVEYHHITQHHSSRSRRAVSSVPALA
KDIGAENERGTNILHVALERSSQHQPRPKVNVQSVVVTTGSKPKDTEDDYVIMIVGILVG
LVLAVILLVLVFFLVRSRNEKEKINEPPKGSRSTEPMMTHAFDRNDSSEV
NT seq
9333 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagcatacccaagaccactgtatggctttttattatttctgcatcactactg
actttgcctggggtttcctgcgcgcgcgggtttgacagcctgggactgacctacggccac
aggtccgagctctcagaagacgccatactggtggccaacaacggaatccgggttcccttc
ggcagatccgtgttcatcgacccgatcaatgatctagtgctgcaggtccgacccggagac
aagtgcaccatcacagtcctggacaacgaccctttgtcacagaaaccgggtcagctgagc
cctaaaaagttcccatgcgagtttggacccagtgatgtgaaatactcacacttcggatct
cggagtccagctaaagacagagtcagactgcagttaaggtatgacacacagaccgacact
gtgatcatcccattcatgatggaggttgaagtgatcttcactcagctcgagatcctcatc
aaaaacatgcctctgactgttgaaaagcttctgggaacgagtaacgtgatcgataacaag
atcctagagttcacttatgatcgaaacatgtaccagtgcaaagtgacttctcttgccgga
acaggtgttttgcccaggtatggaaagcttgtcgatgaaggtaaattagggaaaatgttt
gactgtgatgaatttctcagactgaacattcgctatcgacataccttcactcagcgctct
ccgaacagagattacatccctatgtatgtagagctacaagacaaggagagcaatgtcatc
aaacaggagtttttccaaatgatggtgcgcattaaagaaggagaggaaaacacgccacct
aaacctagtttcatctccatgatgatgatggaagttgaccagttcgtgatgagcgccata
acccctgacatgctcgccgctgaggatgttgaatctccacctgacgacttgatctttaac
attacctctcctctgtcgttcgaggaaggctatattgtcagtacagatgataggaatttg
cccattacatccttctatcagggagacctgacagatcttaaaatagcgtacaggcctccg
tctgaggactcggatgccgagagaattttccaaatcgagtttgtggttgtagatacagag
ggcgccgtctcagatccgtttgcttttatgatcgtcgttaagcccatgaacactctggct
cctgttgtgactcgaaacacagggcagcttctctatgagggtcagaccaggtcactgtct
agttcacaaaacctgcagattagcgatgaggacaatttacacgatgtcaaagtgacagtg
attgacggattaaggcatggtgagctgactgtgattggctccaggagtaaattcttcacc
gtggcagatctggatcacggatctgtcgtataccagcatgacggcagcgatacctatagt
gacaatataattttccggatgacagatggcaaacacgaagtggaatttcttttccctata
accgtagtgccgactgacgacgagccaccgattatcaatgccaacactggtttgttgatg
ttcaaaaaccagatgatgcccatttcacctttaatgctcagcgcagctgatatcgactct
gaggattcaactattaaatttattctggaggcgccgttctcaagtataggagaggtgctg
cttcgtcaatcggacgctccagaagacccatccacgtggaggttcaattctgaagatgag
atgtatgagaaagtagtgacagagtggctccagcaagacattactgatggaaagctgttt
tacagacacattggaccgcataacactaaaaccattatggatcagttcgttttccgagtt
caggacgacaacgatccgccaaaccggtcaggacagaacgccttcattatcagaattctc
cccatagatgacatcccgcctgagcttcaccccgacactaccctgcagctgactgtacat
gaataccagctcactttcttccgcaagaaattcttacgttacaccgatttagactccgag
gacagggatctgaaatataccatcactcagcctccgagagacacggatgagaacagccct
gttattctgggagccattgttctggcagaaagcccaagcacagaggttacagagttcact
caagcacagataaatcaccataaaatagcatacaagccgccagatctggagctgggtata
actccacatgtagtgcagttccattacacggttgaggacacagcaggaaacagtgtcgat
ggagccttcactattttcctgcagcctgttgacaacaaaccaccccagattaccaacaca
gggttcagcgtgttagagcgaggcatacatgtcatcacacgcaccgagcttgacaccaca
gacccagacacggacaacacaaagatctcctttacgctcactcaacctcctctacgtggc
cagatacagtacacattcactgacctgaccaaaggggactcgttcaatctggatgatatt
tctcaaggcaggatctcttactctcacaacggagacgagtcaaccaatgattcctttcaa
cttgacgtgagcgacggagtccatgttgtcactattaccgttaagataaacgtgaagctc
atcgatgatgaaactccaaccataagccttccagaaggtaccatcggctcctatatcgac
gtcttggagaacggagctactgaaatcacagctaatgtcattcagggacgagatgaagac
actgatgacctaagattgacctttatagtagaggatccaccagtcgttggtgaaatactg
gtcaacggcgtaccagccaagagatttacccaagccgacatcatcaatggattagtcgtg
tatgcacacacgagcggagagatcggccttactacgaaagaggacttctttaatttgacc
ctgacagatatgtctgacgagtggaccgtgggtggtaataaaatcaagggcgttcgagta
cacgtaactatcctgccaatagatagccaggctcctcaggtgtttgtcggccaccagttc
agcgttgttgaaggtgagaaaaatgtcattcaaatagcgcacataagcgcttctgatatt
gacactcctaatgatgacctgttgtgcaccatcattgttcagcctacatctggctatttg
gaaaacatctcccctgctccgggatcagagaaatcccggtcgggaactgctatcagcgcg
ttcaccatcaaagacatcaagcaaaatcatatctattatgtgcaaagcattcataaagga
ctggagccagtggaggatagattcacgttcaggtgctcggatggcatcaatttttctgag
agacacttctttcctatcgtaattatcccatcgaatgacgaaaagccagagatccatatg
agagagtttgtggtaatggaaggcatgaatgttgtgattgacactcctatattgaatggt
gttgatgcagatattcccacagacgagctgacatttatcgttactaaacctccaaaacat
ggtttcattataaatcagttaaccacgggtaccgttcctgtaaccaattttactctagac
caaataagagaggcgtctagcattgtttatgagcacgatgattcagaaaccaccgaggac
agttttaaagttcttctcactgatggcaaatttactgtggaaaagactgttattattatg
gttatcccagtggatgatgaaacaccaaggatggctatcaatgatggccttgaaatagag
ataggagaaatcaaagaaatcaccaacaaagttctgaaagccactgatctggatacaaag
gaccgcacactgacttacgttatccgatatggtcccaaccagggaattctgcagaagagg
acaccatttggaacgctccaaaacataaccattggaatgaatttcacacaaagtgatatc
gatgaaaatatgattatatacatccataatggacaggaaggaatacgcgacctgatcaaa
tttgatgtcacggacggcatcaatcccttgattgacaggtacttctatgtaacagtcggt
ggaatagacatggtgtttcctgatgttattagcaaaggtgtttctcttaaagaaggcggg
agagtgaccctaaccacggacttgctcagcaccagtgatctcaacagcccagatgagcac
ttggtcttcaccatcactcgggcaccagtgagaggtcacctggagtgcactgatacacca
ggcatgcccatcacctccttcacccagctccagctggctggaaacaagatctactacatc
cacaccgctgatgacgaggtcaagatggacagctttgagtttgaagtgacagacggttac
aacccagtgtttcgcactttccgcatttccataacggacgtggacaacaagaagccggtg
gtcacaattcacagactggtcgttaacgaagggaagagcaagctaatcacaccatttgag
ctgactgtggaggatcgcgacacgctcgaccgactcctaaagttcaccgtcacgcaggtt
cccattcatggaaagctgctgttcaacaacacccgaaccatcacatccttcaccaagcag
gatctcaacgagaacatgattagctacaagcacgatgggaccgagtctgcttcggacagc
ttttccttcaccgtcacagacggaactcattccgacttttatgtctttcctgatacggtt
tttgagactcgcaaaccccaggtgatgaaaatcacaattctttctgtggacaacggcatt
ccacagattgtggtcaacaagggtgggacgactttgaaaacaatgctcactggtcacctc
ggtttcgtgattaccagtaaagtgctgaaggctgaggacagagacagtccccatggagct
gtaacttttagactgacagtaggcgcagaacatggctacctcatcgacctgggcaaggga
aatgccaccattactacatttactcaagctgacatcgatgacatgcacatatgctatgtt
cttcggaatggagacaacgctaccagtgacaccttccatttctccattgaagacaacgga
gggaacaagctgaagaaccagcagttcaggctgacctgggcttggatctctctggagaag
gagtattacacggtggatgaggaggccaagttcttggaagtggtcttgagacggaggggt
tacctcggcgagacttcgtttgtcagtattggaaccaaagatggcacagccgagaaagac
aaagattttcgtggcaaagcccagaaacaggtccagttcaacccaggccaggccaccgcc
acctggaaggtacggatcctcggtgaccacctgtacgagcagtccgaaaccttccagatt
gttctgtctgagcctgtgatgggggcgctcgagttcccccagacagctacagttcagata
atcgaccctgaagatgagtccacagtgttcatcccttcagcaacatactcgatcgaagaa
gacgtcggagagtttctgattcctgtccgccggtccggagacgtgagtcaagaactgatg
gtcgtctgttttacacagcaaggcacagccactggtactgtccccgctacagtactgtcc
tattcggattatatctcgcgtccagaagaacacgtcagcgttctgcgcttcgaccgagac
gaaatcgagaaggcatgccgtgtggtggtcatcgacgactcgttgtacgagcccgaggaa
agctttaatgtcagcctcagcatgcccatggggggtcgtttgggccgggagttccccacc
accaggatcaccatcctgcctgactctgatgatgcaccggtgttttattttggagaccta
gagtaccgtgtagacgagagcgacggctacgtggaggttcgggtttggagaacaggatct
gacctgtccatgacgggaacggttaccgtgcgctcacgaaaatcggaccccatttcggcc
gaagctggtgaggattacatcggaatcagtaagaacatggactttgcgccaggcgttacc
acgcagacgatccgcgtcaccattctggatgacctgggccagcccgtgctggagggaccc
gagaagttcgagctcgtcctccacatgcccatgaacggcattctgggagagccaagcaaa
gccaccgtcttcatcaacgactccgtgtcagacttgccaaaggtgcagttccgagatgct
aaatacacaggtaacgagaatgacggaaagattacggccatcgttttccgcagcggagat
ctgaggtacagatccagcgtgcgctgctatagccgtcagggttctgctcaggtcatgatg
gatttcaacgagagaccgaacacggatgcttccgttatcacgtttctaccaggggaagtg
gagaagccttgtactctcattctagtcgacgacacggagcacgaagaggtggaggagctc
aggctggtcctggggagccccaaaagcgagtctccgtttggggcgtccataggagttcaa
aacgagacgctcatcaagattaaggatgatgctgacaaggccatcatcaggttcggcgtc
accaagttcagcgtgagcgaacccagcgaggccgggcaggtgtctgtagtgaaggtgcca
gtgctgcgagtgggagacacctccaaagtgtcggtggtgcgagtgcacactaaagacggc
tcagcgacatccggagaggattatcacccggtgtcacaggacattgaattcaaggaagga
gatacagaacacactgtggaggttgagatcctgtacgacggcgttcgtgaaatgagagaa
gcgttcacggtccacctgaaaccagatgagaacatggtggctgagattcagatgaccaaa
gctatcatttacatcgaggagggaaacaccatggcagatgtgacgttcccctctgtgcct
gtggtcatatcgctcctgcattacgatggcacagtcagtgccccagagagcagaccaccc
gctggctacccagtcatctgtgtcacagcctgcaatcccaggtacccagactttgagcgc
accagcaccatctgtgcgagcgagggcatcaacaacacgctgactcgttaccgctggctc
gtgagtgcccccgcagggcctgacggtgtcaccagccctatgagggaggtggacttcgat
acctttttcacctcgtccaaacgcatcacgctggactcggtgtatttccaggcaggctca
cgcgttcagtgcgccgccagggctgtgaactccaacggcgacgaggggcttgagctcagc
agcgccatcttctccgtcagtgtggaggagggtatgtgccagcctcgtgtgatcggtgct
gttggagctgagcctttctctgccaaactgcgctataccgggccagacgacccacatcac
cccaaccttatcaaactcaccgtcaccatgccgcacatcgacggtatgctccctgtggtc
tccacccgtcctctctccaacttcgagctgacgctcagtccggatggcacgcgggtggga
aatcatcgctgttccaacctgttggactacagcgaggtccgcacgcgccacggtttcatc
accgcagctactcgtaacccggaggtcatcggcggcacagcaccctaccagtacagcgct
accttaaggggggagagcacactacgcttctaccgcaaccttcacctggaggcctgcctg
tgggagttcgtcagttattacgacatgtccgagctgcttagtgactgtggagggtccatt
gggacagacggacaggtgctgaacctggtgcagtcgtacgtgacgttgcgtgtgccgctg
cacgtgtcctacgtgttccactctccggtgggtgccggaggctggcagcactttgacctg
cagtccgagctcagacttaccttcgtctacgacacagccatcctgtggagagacggcatc
ggcagcccacccgaggccgagctacaaggagctctctatcccaccagcatgcgcattaac
gaacaaggtcgcttggtggttaacttccgcacagaagctcgcttcaggggtctgttcgtg
acgtcccaccctgcttcccctctgacctccatggttatgtgtaccgatcaccctgggctg
acctttaacctcagcctggtgaggagtgagcccacctacaaccagcccatgcagcagtgg
acgtttgtctccgactttgcagtgagggattattccggtacctacacggtgaaggtgttg
ccctgtactgcccctccgagtctggagtacacactgcctccagtgtgcaatccccgagag
cctgtcgcatttgacctcgacatccgcttccaacaggtgagtgaccctgtagctgcagaa
ttcagcctgaacacacagatgctgctgctctctaagaggactctgtggttgtcagatggt
tccatgggattcgggcaagaaagcgacactgcattctctgagggtgacatcatctacggc
cgtgtcatggtggatcctgtgcagaacctcggagactcctttatctgcaacatcgagaag
gtgttcctgtgtacaggggcagatggctatgtgccaaagtacaaccctgacaactacgag
tatggctgtttagcagatgctgcttcactcctctacaggttcaagatcattgacaaagct
cagccagagactcaggccagagcatttgggagtgttagcttcaatgctctcctggctgtt
gatgaccctgaagctttgtcgctagtgaggcagccaggctcggatggctttaggatggac
tccacacctctgtttcaggtatctgcaggaagggagtggtatatccacaccatatacacc
gtccgctccagagacaacgccaaccgaggcatcggaaaaaggagcgtggagtaccaccat
attactcagcaccactcctctcgttccagaagggccgttagcagcgtcccagctctggcc
aaggacatcggagctgagaacgagcgaggaaccaacatcctgcacgtagctctggagcgc
agcagccagcatcaaccccggcccaaagttaacgtccagagcgtagtcgttaccacaggg
tccaagccgaaagatacggaggacgattacgtgataatgatcgtaggaatcctggtgggt
ctcgtcttggctgtcattctcctcgtgcttgtgttttttttggtgcgctccaggaacgag
aaggagaaaatcaacgagcctcctaagggctccagaagcacagagcccatgatgacacac
gcgtttgacagaaacgacagctcggaggtgtga
DBGET
integrated database retrieval system
