Ictalurus furcatus (blue catfish): 128621574
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Entry
128621574 CDS
T09387
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128621574 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128621574 (ndc1)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128621574 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
128621574
NCBI-ProteinID:
XP_053503417
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All DBs
Position
17:complement(26115558..26129317)
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AA seq
664 aa
AA seq
DB search
MFSFNQNCWFIRKVVRWRAVASIGWSVVLLPPITALLVFFIRFSVFHPTHWLSGCLGLLT
EASTLFSMFLLCAAVILLAFFNLQYYTVVPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHALHSPCTHGDSVDVCLNEYHMFMLLAGAFMGYSHSLMGVVQNVHY
VSFHIIQQYKYMRFKGSVWWLLKCSAVQSLYSVRNYAILYFLFGHIPRTWISNTLNLHID
SSVRSLDSFGGLCDVSLFYQLWISGTFLLLTWYLTVLLFRIYVTEPYRFPVQSSFAEDAE
ECLPKVLTEKNALVMKFLALQDLALLSQHSPARRQEVFSLSQPGGHPHNWNAISKECLSL
LSELTQRLIAHHDAVASNGRAKPPSDSRSSSSCSVTSGTEDLSQSPFHSALSRTPGSVFG
SAVSGVNLPLTAPFTPDLTSPFSSPAFRPLFSSQLAQKPWLGSVQSPHVTRRNPKLWSTS
TDSQTNGSPLPSPEPAPKPAGERKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFNKLPEAS
SQALFADSQAHIWALEGLSHLVSASYSEDKYGVVQTTLPSILSSMLSLQEAVDRHFKLPH
ASSKPLKTSCSLGDSTYKTLRFALRAALKTAIYRITTTFREHLHAVSVPAEQQKRLQQFL
EYKE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaatcagaattgctggtttatacggaaggtggtgagatggcgagctgta
gccagtatcgggtggtcagtggtgctgctgcctcccatcaccgctctgctcgtcttcttc
atcaggttcagtgtgtttcaccccacacactggctctcgggatgtttgggtttgctcaca
gaggcgagtacacttttctccatgttcctgctctgtgcagctgttattctcctcgccttc
ttcaacctgcagtattacacggtcgttccctccatcccgtgttctcgagtggctctcctg
gctgaagtgctccaccctcgtcagtgtgttcactctctggtgcactgcgcggtcgggatg
ctggtgatgtggtgtgtgtgcgtgatggcaggcggccgctatcacgctctccactctccc
tgcacacacggcgacagtgttgacgtgtgtctgaacgagtatcacatgttcatgctgctg
gccggagcgtttatgggttactctcacagtttaatgggcgtcgtccaaaacgtccactac
gtctcctttcacatcatacagcagtataagtacatgcgctttaaaggctctgtgtggtgg
ctgctgaagtgcagtgctgttcagtctttatattcagtcaggaattacgccatcctctat
ttcctcttcggacacatccccaggacgtggatctccaacacactgaatctgcacatagac
agttctgtgcgctctctggactcgtttggaggactgtgtgacgtgtcgttgttctaccag
ctgtggatcagtggaacattcctgctgctcacctggtacctcaccgtgctgctcttcagg
atttacgtcacagagccgtacaggtttccggtgcagtcgtcattcgctgaggacgcagaa
gagtgtcttcctaaagtcctgactgagaagaatgccttggtcatgaagtttctggcgctg
caggatttggcgttgctttcccagcattcccctgcacgtagacaggaagtcttcagcctc
agtcagccaggtggtcaccctcacaactggaacgctattagtaaggagtgtttgtcactg
ttgagtgaattaacacagcgtctcatcgctcatcacgacgccgtggcgtctaacggcaga
gcaaaacctccgtctgactccagatccagctcatcctgctcagtgacatcggggacggag
gatctttctcagagtcctttccacagtgctctgagcaggactcctggctcagtgttcggt
tccgcagtgagcggtgtgaacttgcccctgaccgccccgttcacccccgacctgacctcc
ccattctccagccccgccttcagacccctgttcagctcacaattggcccagaaaccctgg
ttgggttcggtccagagtcctcacgtcacccggaggaaccccaaactgtggagcacgtcc
actgactcgcagaccaatgggagccctctgccatctcctgagcctgcccccaaacctgca
ggtgaacggaaacccagctttctgtcccagtggctccagaacaggaaggaacaggttaaa
ggtttcttggcaaagcgtgtgctggttgtgtatttatttaataagctgcctgaggcttcg
agtcaagctctgtttgctgatagccaagcgcacatctgggctctggaaggattgtctcat
ctggtgtctgcttcgtactctgaggacaagtatggagtggtgcagactacgttacccagc
atcctcagcagcatgctgtctctgcaggaggctgtggaccgtcactttaagcttcctcac
gcctccagtaagccgctgaagacctcgtgcagtttgggcgactcgacgtataaaaccctg
cgctttgctctgagggcggctctgaaaaccgccatctacaggatcaccaccaccttcagg
gagcacttacatgctgtcagtgttccagcggagcagcagaagagacttcagcagttcctg
gaatataaggagtag
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