KEGG   Ictalurus furcatus (blue catfish): 128621574
Entry
128621574         CDS       T09387                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128621574 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ifu03019]
    128621574 (ndc1)
Messenger RNA biogenesis [BR:ifu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128621574 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 128621574
NCBI-ProteinID: XP_053503417
LinkDB
Position
17:complement(26115558..26129317)
AA seq 664 aa
MFSFNQNCWFIRKVVRWRAVASIGWSVVLLPPITALLVFFIRFSVFHPTHWLSGCLGLLT
EASTLFSMFLLCAAVILLAFFNLQYYTVVPSIPCSRVALLAEVLHPRQCVHSLVHCAVGM
LVMWCVCVMAGGRYHALHSPCTHGDSVDVCLNEYHMFMLLAGAFMGYSHSLMGVVQNVHY
VSFHIIQQYKYMRFKGSVWWLLKCSAVQSLYSVRNYAILYFLFGHIPRTWISNTLNLHID
SSVRSLDSFGGLCDVSLFYQLWISGTFLLLTWYLTVLLFRIYVTEPYRFPVQSSFAEDAE
ECLPKVLTEKNALVMKFLALQDLALLSQHSPARRQEVFSLSQPGGHPHNWNAISKECLSL
LSELTQRLIAHHDAVASNGRAKPPSDSRSSSSCSVTSGTEDLSQSPFHSALSRTPGSVFG
SAVSGVNLPLTAPFTPDLTSPFSSPAFRPLFSSQLAQKPWLGSVQSPHVTRRNPKLWSTS
TDSQTNGSPLPSPEPAPKPAGERKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFNKLPEAS
SQALFADSQAHIWALEGLSHLVSASYSEDKYGVVQTTLPSILSSMLSLQEAVDRHFKLPH
ASSKPLKTSCSLGDSTYKTLRFALRAALKTAIYRITTTFREHLHAVSVPAEQQKRLQQFL
EYKE
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgttttccttcaatcagaattgctggtttatacggaaggtggtgagatggcgagctgta
gccagtatcgggtggtcagtggtgctgctgcctcccatcaccgctctgctcgtcttcttc
atcaggttcagtgtgtttcaccccacacactggctctcgggatgtttgggtttgctcaca
gaggcgagtacacttttctccatgttcctgctctgtgcagctgttattctcctcgccttc
ttcaacctgcagtattacacggtcgttccctccatcccgtgttctcgagtggctctcctg
gctgaagtgctccaccctcgtcagtgtgttcactctctggtgcactgcgcggtcgggatg
ctggtgatgtggtgtgtgtgcgtgatggcaggcggccgctatcacgctctccactctccc
tgcacacacggcgacagtgttgacgtgtgtctgaacgagtatcacatgttcatgctgctg
gccggagcgtttatgggttactctcacagtttaatgggcgtcgtccaaaacgtccactac
gtctcctttcacatcatacagcagtataagtacatgcgctttaaaggctctgtgtggtgg
ctgctgaagtgcagtgctgttcagtctttatattcagtcaggaattacgccatcctctat
ttcctcttcggacacatccccaggacgtggatctccaacacactgaatctgcacatagac
agttctgtgcgctctctggactcgtttggaggactgtgtgacgtgtcgttgttctaccag
ctgtggatcagtggaacattcctgctgctcacctggtacctcaccgtgctgctcttcagg
atttacgtcacagagccgtacaggtttccggtgcagtcgtcattcgctgaggacgcagaa
gagtgtcttcctaaagtcctgactgagaagaatgccttggtcatgaagtttctggcgctg
caggatttggcgttgctttcccagcattcccctgcacgtagacaggaagtcttcagcctc
agtcagccaggtggtcaccctcacaactggaacgctattagtaaggagtgtttgtcactg
ttgagtgaattaacacagcgtctcatcgctcatcacgacgccgtggcgtctaacggcaga
gcaaaacctccgtctgactccagatccagctcatcctgctcagtgacatcggggacggag
gatctttctcagagtcctttccacagtgctctgagcaggactcctggctcagtgttcggt
tccgcagtgagcggtgtgaacttgcccctgaccgccccgttcacccccgacctgacctcc
ccattctccagccccgccttcagacccctgttcagctcacaattggcccagaaaccctgg
ttgggttcggtccagagtcctcacgtcacccggaggaaccccaaactgtggagcacgtcc
actgactcgcagaccaatgggagccctctgccatctcctgagcctgcccccaaacctgca
ggtgaacggaaacccagctttctgtcccagtggctccagaacaggaaggaacaggttaaa
ggtttcttggcaaagcgtgtgctggttgtgtatttatttaataagctgcctgaggcttcg
agtcaagctctgtttgctgatagccaagcgcacatctgggctctggaaggattgtctcat
ctggtgtctgcttcgtactctgaggacaagtatggagtggtgcagactacgttacccagc
atcctcagcagcatgctgtctctgcaggaggctgtggaccgtcactttaagcttcctcac
gcctccagtaagccgctgaagacctcgtgcagtttgggcgactcgacgtataaaaccctg
cgctttgctctgagggcggctctgaaaaccgccatctacaggatcaccaccaccttcagg
gagcacttacatgctgtcagtgttccagcggagcagcagaagagacttcagcagttcctg
gaatataaggagtag

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