Ictalurus furcatus (blue catfish): 128621630
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Entry
128621630 CDS
T09387
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03040
Spliceosome
ifu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128621630 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128621630 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ifu03041
]
128621630 (snw1)
Spliceosome [BR:
ifu03041
]
Complex B
Other components
Prp19-related factors
128621630 (snw1)
Complex C
128621630 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
128621630
NCBI-ProteinID:
XP_053503520
LinkDB
All DBs
Position
2:complement(11077033..11088871)
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AA seq
536 aa
AA seq
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MALKSFLPMPTQLSQDQLEAEEAATAQGSHSTALVLTRREPPPYGSRKGWVPRTAEDFGD
GGAFPEIYVAQYPLEMGRKKRTSNALALQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKDVLHDDAPELQRPDGEAVQELTEKTRAALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKGHGDKGGDDTEVRERDDIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDISEAIALGLPNPRISSEAQYDQRLFNQSRGM
DSGFAGGEDEVYNVYDQPFGRGRDMAQSIYRPSKNTGKDVYGDDLDTLMQSTRFVPDREF
SGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTAGRSKDYDHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaagagctttttacccatgccgactcagctgtctcaagaccagcttgaggca
gaagaggctgcaacggcacaggggtcccattccacagcgctggtgttaactcgtagagaa
cctcctccgtatggctcccgaaaaggatgggtgcctcgcactgctgaggactttggtgac
ggcggtgcgtttccggagatctacgtggctcagtacccacttgaaatgggcagaaagaag
agaacctccaacgcactcgccttacaggtggatgcggaagggaagatcaagtatgatgcg
attgctcgtcagggacagggaaaggataaggtcatatttagtaaatatacagatttgctt
ccgaaagacgtgcttcatgatgatgctcccgagctgcagagacctgatggggaggcagtt
caagagctcacagaaaagaccagagctgctttagacaagcaggtatcccagaagattgct
gccgccatgcctgtacgagcagcagataaacaggccccggcacagtacatccggtacacg
ccttcgcagcagggtgtggcatttaactctggtgccaagcagagggtcattcgtatggtg
gagatgcagaaagacccgatggagccaccacggttcaagattaataagaagattcctcgt
ggacccccgtctcctcctgctccagtcatgcactctcccagcagaaagatgaccgtgaaa
gaacaacaagagtggaagattcctccctgcatttccaactggaagaacgccaagggttac
acaataccactggacaagcgtctggctgctgatggaagaggtcttcagacagttcacatc
aatgagaatttcgccaagttagctgaggctctctacattgcggacagaaaggcacgagag
gcagtggagatgcgtgcgcaggtggaaaagaaaatggcacaaaaggaaaaggagaaaaag
gaggagaagctcagggaactggcgaagatggcccgggacaggagagcgggcatcaaaggc
cacggagacaaaggtggtgatgacaccgaggttagggagcgtgatgatatccgccatgac
aggaggaaggagaggcagcacgacaggaatatctccagagccgcccccgataaaaggtct
aaattgcagagggaccaggaccgagatatcagtgaggcgattgctctgggtctgcccaac
ccacgtatctccagcgaggctcagtatgatcagcgcctctttaaccagagcaggggtatg
gacagtggatttgcgggaggagaggatgaggtgtataatgtatacgaccagccctttggg
agaggcagagacatggcacagagcatctacaggcccagcaagaacacaggaaaggatgtg
tatggagatgacctggacacactcatgcagagcaccaggtttgtccctgacagggagttt
tccggtacggatcatggaccacgcagagatggacctgtccaatttgaagaagatcctttt
ggtctggacaagttcttggaagaggccaagcaacatggtggctccaaaaggccatcgacg
gccgggcgctcaaaggactacgatcatgacaagaagcgcaggaaggagtga
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