Ictalurus furcatus (blue catfish): 128621707
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Entry
128621707 CDS
T09387
Name
(RefSeq) roundabout homolog 2-like
KO
K06755
roundabout, axon guidance receptor 3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128621707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ifu04515
]
128621707
Cell adhesion molecules [BR:
ifu04515
]
Immunoglobulin superfamily
ROBO family
128621707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
FN3_DSCAM-DSCAML_C
C2-set_3
Ig_PDGFR_d4
Unc5_NetrinR_N
Ig_RIMBP2
DUF1918
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
128621707
NCBI-ProteinID:
XP_053503638
LinkDB
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Position
17:complement(7791600..7874585)
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AA seq
1330 aa
AA seq
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MALRVRKSFLLFFIQICLCTGSRLRLEDSPPRIVEDPSDLIVSKGEPATLNCKAEGWPTP
NVEWYKDGEHVETDKDDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYTCVARNYLGEAV
SRNASLEVATLRDDFRQAPSDVVVAAGEPAVLECIPPRGHPEPSISWKRNNVRVSDKDSR
ISMRGGKLMISHTRKSDAGMYVCVGSNMVGERDSDPAELVVFERPVFIRRPVNQIVLADE
TVDFLCEVHGDPAPTIRWRREGGELPRARFEIRGDNTLRLVKVREEDEGTYTCVTENSVG
RTEASATLQVHVPPQIVLQPQDQVSAQGQTVTFRCGTKGNPPPAVFWQKEGNQMLLFPGQ
PLSPAGRYSVSMSGELIITAVHSEDSGYYMCQAISVAGSTVSKAFLKVVTGPSDLVPPII
HQGPGNQTLTLGSSTELQCHVMGIPPPSIRWEKDGQRLTADGVHISLIENATLHISSLQE
TDSGMYACVASSSTGETRWSGSITVRDTETSSLVRLSQTLQLPGPPLKPAVTDVSQSSVT
LTWQPNQHEGGAAVTSYIIEAFSQSVGSTWQTVADQVKQEKHTVSGLFPNTVYLFIVRAV
NSYGLSDPSPISEPVRTQDGSPNSSPIDHRRVQADLAEVTVYLHPPEILTPTSIQISWTV
EREPYYIQGYRLLYRPSGSAWLVQDIKAASKHTAVLSELHRGTEYELKLRPYFKEYQGSD
SELVVFHTPEEVLSGPPQAVSVVQLDNSSTVRVSWEPPLADIQDEPILEYRVWCVGNVSG
LQMQLNQSVTGEVLHVLVDDLVPEMLYSVQVVAVTSTGPGEPSEPVFIFITPVGEPSLPV
LNDDSSSLSEHISALFRQPAFIATLGSACWMVLMGFSAWIYCRHKRSKELGHYATSFAYT
PAVGLSNGDRAGLSNGRPCLLGSNMVNYPWLADSWPNNNFNQSSKDSMNCCTGKHNSNDR
YYNTTGTSFLRPNQTYSPTSNEGAIYSTIDRADESQHDLSSVYSHDLYISSPVLSKPDLD
QWSLQSDLSTAEYAQLQYPRTDTANVEMQKPCESATYNWSNVLSLPPPHTREQRQQPRCE
DDEDWCAPLPERTYRLEGLENAATLPLRGERCGRATTYSPQFTATLNPSPNEERMPVNPC
LQHPDLLLRSKGPCTPNSKSTQPNPNLLSNLELQNCSLPRLPGHWRDISQVERSQHLKGE
IALFVHEKSIPSPTEQPRSKKTSSRDGPRRRETLKTGDLPPPPEPPPAEGSQVDLAAMSK
ARTQPPSREWRADQRTQSQWSTEDEELIHYSVNMQSRNHMSSQCSPPATSSSCSHPSTAS
HTRRKKENVM
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcgggtcagaaagagcttcctgctgtttttcattcagatctgcctatgcaca
ggctctcggttgcgtctggaggacagtccgcctcggatcgtggaggacccgtctgatctg
atcgtgtctaaaggtgaaccagccacgctgaactgcaaagctgagggatggcctacaccg
aatgtggagtggtacaaagatggagaacatgtagagacagataaagatgacccgcgttca
caccgcatgctgttgcccagcggctcgctcttcttcctacgaattgtgcacggccgccgc
agcaagccagacgaaggtgtctacacctgtgtggcccgtaactacctcggggaggcagtg
agtcgcaatgcctcattggaggtggccaccctgagagatgatttccgccaggccccgagt
gatgtggtggttgctgccggtgaacctgccgtgctggagtgcatcccaccacgcggtcat
ccagagcccagcatctcctggaagaggaacaacgtccgagtgagcgacaaagacagcagg
atctctatgcgcggtggcaagctgatgatctcacacacccggaagagtgatgcaggcatg
tacgtgtgcgtaggctccaacatggtgggagagagggacagcgatccggctgagctggtg
gttttcgagagaccggtgttcatccgtaggccagtgaatcaaatagtgctggcagatgaa
acagtggacttcctgtgcgaggtccatggagatccagctcccaccatccgttggaggcgt
gaagggggagagctgcctcgagccagatttgagatccgcggtgacaacactctccgtctg
gtgaaggtgcgagaggaggatgaggggacttatacgtgtgtgacggaaaacagcgtgggg
agaacggaggcctcggcgacgctgcaggtccatgtccccccacagattgtcctccagccc
caggaccaggtctcagcccaaggacagactgtaactttccgctgtggcacaaaaggcaac
cctcctccagcagttttctggcagaaagaagggaatcagatgctgctattcccagggcag
cctctttctccggctggacgttactccgtgtccatgagcggtgagctaatcatcacagca
gtccacagtgaagattctgggtactacatgtgccaagccatcagcgtggcaggcagtact
gtctccaaagccttcctgaaggtagtcactgggccctcagacctcgttcccccaatcatc
caccaaggcccgggtaaccagacgctgacactgggctccagtaccgagctccagtgccat
gtaatgggcatcccacctcccagcatcagatgggagaaggacgggcagagactcactgca
gatggcgttcacatcagtctgattgaaaatgccactttacacatcagcagcctgcaggag
accgactcagggatgtacgcgtgtgtagcctccagttccacaggagagacgaggtggagt
ggcagcatcaccgtgagagatacagagacatcgtccctggtccggctctcacagaccctg
cagctgcctggtcccccactgaagcctgccgtgacagacgtgagccagagcagtgtcacg
ctgacgtggcagcccaaccagcacgaaggaggcgctgctgtcacctcttatattatcgag
gcttttagtcagtcagtgggaagcacatggcagactgttgcagatcaggtgaagcaggag
aaacacacagtgtctggtctcttccccaacactgtgtaccttttcattgtgcgtgcagtg
aactcgtacggcctgagtgacccaagccccatctcagagcctgtccgaacgcaagatggc
agtcccaacagttcgccaatcgatcacaggcgtgtgcaggcggatttagcagaggtcaca
gtgtatctgcatcctccagagatcctgactcccaccagcatacagatctcatggactgtt
gagcgtgagccttactacattcagggttacaggctgctgtacaggccatcgggcagcgcc
tggctggttcaggacataaaggcagcgtccaaacacacagcagtgttatcagagctgcac
agaggcacagagtacgagctcaaattgaggccttacttcaaagagtaccagggctctgac
agtgagctagtagtgtttcacaccccagaggaggtgctaagtggcccccctcaagctgtc
agtgtggtccagttagataacagctcaacagtgcgagtgtcctgggagcctcctttagct
gatatccaggatgagccaattttggagtacagggtgtggtgtgtagggaatgtgtctgga
cttcagatgcagttaaaccaaagtgtgaccggggaagtcctccacgtactggtggatgac
ctggttcccgagatgctgtacagcgtgcaggtggttgcagtgaccagcaccggacctgga
gaacccagcgagccagtatttattttcatcacccctgtaggagagccctcattgcctgtg
ctgaatgatgacagcagtagtctttcggagcacatctcggcactgttcagacaaccagct
tttattgccactctgggttcagcctgctggatggtgctgatgggcttcagtgcctggatt
tactgcagacacaagagaagcaaagagctcggccactatgccacctcttttgcctacaca
cctgcagttggcctctccaatggtgaccgagcaggacttagcaatggaaggccatgcttg
cttgggtccaacatggttaactatccctggctggcagattcttggccgaacaacaacttc
aaccagagcagtaaagactccatgaattgctgtactggcaaacacaactccaacgacaga
tattacaacactacagggacaagcttcctgaggccgaaccaaacatacagcccaacatcc
aacgaaggtgccatctatagcactatcgacagagctgacgagtcacagcatgacctgagt
agtgtttactctcatgacctgtacatcagctcaccagtcctgtccaaacctgacctcgac
cagtggagcttacagtctgacctcagtacagcagaatatgcccaactccagtacccaagg
acggacactgctaatgtggaaatgcagaagccttgtgagtcagcgacgtataactggtcc
aatgttctgtccctgccgccaccacatacccgagaacagagacagcagcccaggtgcgag
gatgatgaagactggtgtgcccctttgccggagaggacttatcggctggagggtttggag
aacgcagcaacgttgcctctgagaggagagcgctgtgggcgagctaccacctacagcccg
cagttcacagccaccctaaatccatctcccaatgaggaacgaatgccagttaatccgtgt
ttacagcatcctgacttactgctacgcagtaaggggccatgcacaccaaattccaaatca
actcagcccaacccaaacctactcagtaacctggaattacagaactgcagcctgccccgt
ctgccaggccattggagagacatctcccaagtggagaggtctcagcatttaaaaggtgag
attgctttatttgtgcatgagaaatcaattccatcccccactgagcagccacggtccaaa
aagacatcatccagagatggaccccggagaagagaaaccttaaaaacaggagatctgccc
cctccgcctgaaccccctcccgcagaaggctctcaggtggacctggcagccatgtcgaag
gccagaacacagccacctagccgagaatggagggcagatcagagaacacagagccagtgg
agcacagaagatgaggagcttatccattacagtgtgaatatgcagtccaggaatcacatg
tccagtcaatgttctcctcctgcaacttccagctcttgctctcatccctccacagcttcc
cacaccaggaggaaaaaagagaacgtgatgtga
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