Ictalurus furcatus (blue catfish): 128621724
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Entry
128621724 CDS
T09387
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128621724 (taf1a)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
128621724 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
128621724
NCBI-ProteinID:
XP_053503658
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All DBs
Position
2:11357823..11372188
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AA seq
475 aa
AA seq
DB search
MQTGNVTLENLLGKTSGKVHRPLINYLENTGINADLNDETSEDERSHTSVKQAGLLLVYP
IKGTKMCKESGFHKTTRLCLQAIRDALLHHRWQEAVQYLDVYTQTLEDTTVSKQSVACEI
IWRLGTEVLQHHPKKELEHFNVLYERMKNTGVKNFAKICLEHAFHLLLNGQIHNAKQQLS
VAMSWRYGKHSASQGLELKLIHAYCGFLDYLLWSSKRQAFSDTEDCGNNHEMHSHFRQAS
VTLQEIIKQPGVWDPFVYGCVDMLEFYNDEEEALKLLQNYAYNDEFPSNPNAHIYLYKHQ
LRHKASPAQLIKTLKVLHSLVPSHELMLEYCTLLIKSGQQKNLQHALSVAMNLLEHACWK
TDVKAWTCLLHVLSCVKRRKNLKKLIKEEWQRRKDLWLKMHFKTFHSRKDSEALMSVKVK
VLLRVGLYNTRYSMKYYKDQKKMMAQQEKSEEHDVLKVKGNKGKISEKARKRKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgggaacgtgacactggagaacttgctggggaaaacatctggaaaagtgcac
cgtcccctaataaattatctggaaaatactgggataaacgcagatctgaacgatgagact
tcggaggatgagagaagtcatacgtcagtgaaacaggccggtttgctgctcgtctatccc
attaaagggacaaaaatgtgtaaagaaagtggattccataaaactacaaggttatgtctt
caagccattagagatgcccttctgcatcatcgctggcaagaagctgtgcagtatttagat
gtttacactcaaacactggaagacaccacagttagcaagcagtcagtagcctgtgagatt
atttggagacttggcactgaagtcctccagcatcatccaaagaaagaactggaacatttt
aatgttctttatgagcggatgaaaaacactggagtgaaaaattttgctaagatctgtttg
gaacatgctttccaccttctgttgaacggccagattcacaatgccaaacagcagctatcg
gtcgcaatgagctggaggtatggcaagcattctgcaagtcagggtctggagttaaagctc
atccatgcgtactgcggctttctggattatttgctctggtcttcaaagaggcaggccttc
tctgatacagaggattgcggaaataaccatgagatgcacagccacttcagacaagcctct
gtgactctgcaggaaatcatcaaacagccaggagtgtgggacccttttgtatatggttgc
gttgatatgctcgagttctacaacgatgaagaagaagctctgaagttactgcaaaactat
gcctataacgatgaatttccatcaaaccccaatgctcacatttacttgtataagcatcag
ctgagacataaagcttcaccagcacaacttattaaaactctaaaggtactgcactcattg
gttcccagccatgagctgatgctggaatattgcactctgttgattaagtcaggacaacag
aaaaatctgcagcacgctcttagtgttgctatgaatcttctggaacatgcctgctggaag
actgacgtgaaggcatggacctgtctgcttcatgttctcagttgcgtcaaaagaagaaaa
aaccttaagaaacttatcaaagaagagtggcaacgcagaaaagacctctggttgaaaatg
catttcaaaaccttccatagcaggaaggactctgaagcacttatgagtgtcaaagtgaaa
gtactgctccgcgtgggcctgtataacacacgctacagtatgaagtactataaagatcag
aagaaaatgatggctcaacaagaaaaaagtgaagaacatgatgttttgaaagtgaaggga
aacaaaggaaaaattagcgaaaaagcaaggaaaagaaagaagaaataa
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