Ictalurus furcatus (blue catfish): 128621747
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Entry
128621747 CDS
T09387
Name
(RefSeq) hemicentin-2-like
KO
K06548
sialoadhesin
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128621747
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ifu04090
]
128621747
04091 Lectins [BR:
ifu04091
]
128621747
CD molecules [BR:
ifu04090
]
Proteins
128621747
Lectins [BR:
ifu04091
]
I-type lectins (Siglecs)
128621747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_CD22
Ig_4
Ig_5
VEGFR-1-like_Ig-like
C2-set_2
Ig_7
C1-set
Motif
Other DBs
NCBI-GeneID:
128621747
NCBI-ProteinID:
XP_053503681
LinkDB
All DBs
Position
17:18368853..18394243
Genome browser
AA seq
1706 aa
AA seq
DB search
MYSVWNSVLSWVLLCLFSSIAMEDTSRSIVIEEPTTTTSQEGSCVTINCKFKYQDGLQLL
WIKDPKWIEKEKRFDGIIVYNSTDEQPQVTEYSNRVEFFNDRKQSSHWTNCTLKIHDLKK
NDSGNYTFRYIGSEKYISNTFLLTVMDNPCKVHIKPANLNKSIKEGDKVNLQCATSAACE
FHPLWQSSGSSEILKSEQSKDEVEKRSELQLIVSWTDDGRTLTCRPSRSNDNWLERRVTL
RVEYAPKETKVIESSSSKDVKEGEQVTISCSSKARPNANFTWIKHQSSFSQHGENLTLYN
MTPEDGGKFYCLANNEHGSEKSNDIKINVIYAPKGVDINPKLAELKEGDRLTLTCLVQNS
NPEVDMQSYRWYKDGQEINQQTMNTFTVPSVRQRDKGVYQCQARNSVGETMSTNITQVSV
KYHPQNTSIDGTSGIKLGFELNLKCVTEAEPVPHKYSWYFKPEHEQQFVTLSHTDEMYQI
EKVAVSNAGLYKCSAQNIVGKGANSTEINVLVFYPPKTPNLTMKEVVKEEELYTITCTVE
SSPQATLTLSRSSLTNPEKDIITVQYVQSNTLKFAANATVSDAGMYTCKAENTEGKNFSK
NQLKVLYAPKNVTALADPGVELKEGSNLTLTCKADSLPEVSAYTWKKSSATHSQTVGHGQ
KITLHFLKSSDSDHYFCISRNEIGSAKSSSIYIRIKYAPKGVDINPKLAELKEGDRLTLT
CLVQKSNPEVDMQSYRWYKDGQEINQQTMNTFTVPSVRQHDKGVYQCQARNSVGETMSTN
ITQVSVKYHPQNTFIDGTSEIKLGFELNLKCVTEADPLPHKYSWYFKPEHEQQFVTLSHT
DEMYRIEKVAVSNAGLYKCSAQNVVGKGANSTEINVLVFYPPKTPNLTMKEVVEEEELYT
ITCTVESSPQATLTLSRSSLTNPEKDIITVQYVQSNILKFAANATVSDAGMYTCEAENTE
GKNFSKNQLKVLYAPKNVTALADPGVELKEGSNLTLTCKADSLPEVSAYTWKKSSATHSQ
TVGHGQKITLHFLKSSDSDHYFCISRNEIGSAKSSSIYIRIKYAPKGVDINPKLAELKEG
DRLTLTCLVQKSNPEVDMQSYRWYKDGQEINQQTMNTFTVPSVRQRDKGVYQCQARNSVG
ETMSTNITQVSVKYHPQNTFIDGTSEIKLGFELNLKCVTEADPLPHKYSWYFKPEHEQQF
VTLSHTDEMYRIEKVAVSNAGLYKCSAQNVVGKGANSTEINVLVFYPPKTPNLTMKEVVK
EEELYTITCTVESSPQATLTLSRSSLTNPEKDIITVQYVQSNTLKFAANATVSDAGMYTC
KAENTEGKNFSKNQLKVLYAPKNVTALADPGVELKEGSNLTLTCKADSLPEVSAYTWKKS
SATHSQTVGHGQKITLHFLKSSDSDHYFCISRNEIGSAKSSSIYIRIKYRPRITLIHNMT
SLGLWEKAVPIHLSCSVQCDPPATFFAWYKMEENTTVLSNNVNYTVQPQNPGTYYCYARN
EEGESRSEPVKIFLNHFIIKQLVQVIISLLVIVFLIGVIFLIQRIILRKRSAQRSFFFSA
APLCFLSDLGSSDSCNNTRENLVMEGSTELSSFRDNHSAVQSNPPANRNIQAGRPNSNIP
SKQKQHHTEEDLTMTTVNYAMLQFVDSNNPNKSVPSHDDSGPVYADVSKNKQMAKKPQDG
HEDYENVSGVCREAAISQHKLGLGQQ
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagtgtggaattctgtcctttcctgggttttgttgtgtttgtttagctcaata
gcaatggaagatacatcacgatctatagtcatagaggaaccaacaacaacaacaagccag
gagggatcgtgtgtcacaattaactgcaaatttaaatatcaggatggactgcaactgttg
tggattaaagatcctaagtggattgaaaaagaaaagagatttgatggaattattgtatat
aatagtacagatgagcagccacaggtcactgagtactctaacagagtggaattttttaat
gaccgtaagcagagcagtcattggaccaattgcacattaaaaattcatgatcttaaaaag
aacgacagtggaaactatacatttaggtacataggatcagagaaatatataagtaataca
tttcttctcacagtcatggacaatccctgcaaggtccacattaagccagcaaatctgaac
aagtcaatcaaagaaggagacaaagtgaatcttcaatgtgcaacatcagcagcctgtgag
tttcatcctttatggcaatcgtctggctcaagtgagattctcaaaagtgagcaaagtaaa
gatgaggtggaaaaacgcagtgagctgcagttgatcgtgagctggacagatgatgggaga
actttgacatgtcgtccttctagaagtaatgacaactggctggagaggagggttacactg
agagtggaatatgcacccaaagaaacaaaagtgattgagagctcaagctctaaggacgtg
aaagaaggagaacaagtgacaatttcatgctccagcaaggcccgccctaatgctaacttc
acatggattaaacatcaaagctctttttcccagcatggagaaaatcttactttatataat
atgacaccagaagatggaggcaaattctactgtctggctaacaatgaacatggaagtgaa
aagtcaaatgacataaaaatcaacgttatttatgctccaaaaggtgtcgatatcaatcct
aaattagctgaactcaaagagggggacaggcttacactcacgtgtctggtgcaaaacagc
aatccagaagttgacatgcagtcctacagatggtacaaagatggtcaagagattaatcaa
caaacaatgaatacattcactgtgccaagtgtaagacagcgtgataaaggagtgtatcag
tgtcaggccagaaattcagtaggagagaccatgtctacaaacattacccaagtatctgtg
aagtatcatccacaaaacacatccattgacggcacaagtggaataaagttggggtttgaa
cttaaccttaaatgcgttactgaggctgaacctgttcctcacaaatattcctggtatttt
aaaccagaacatgaacagcagtttgtcaccctttcacacacggatgagatgtaccagatt
gagaaagtggctgttagtaatgctgggttgtataagtgcagtgcgcagaacattgtaggt
aaaggagcaaactctactgaaataaacgttcttgtgttctatccccccaaaacaccaaat
ctgaccatgaaagaagttgtaaaggaagaagaattatatactataacatgcactgtagaa
agctcaccccaggcgacgctcacactaagcagatcctctctgacaaacccagaaaaagac
ataatcacagttcagtatgttcagtccaacacactcaaatttgctgccaatgcgaccgtg
tcagatgcaggtatgtacacctgcaaagcggaaaacacagagggaaaaaacttctcaaaa
aatcagctgaaagttttgtatgcccctaaaaatgttactgcattagcagatcctggtgta
gagctaaaggaaggctctaacctgacactcacctgtaaagctgattcccttcccgaggtg
tctgcttacacatggaagaaatcttctgcgacacactcacagacagtggggcatggacag
aaaataacactccatttcctgaagagctctgactctgaccattacttctgtatctccaga
aatgaaattggcagtgctaagtcctcatcaatatatatcagaatcaagtatgctccaaaa
ggtgtcgatatcaatcctaaattagctgaactcaaagagggagacaggcttacactcaca
tgtctggtgcaaaagagtaatccagaagttgacatgcagtcctacagatggtacaaagat
ggtcaagagattaatcaacaaacaatgaatacattcactgtgccaagtgtaagacagcat
gataaaggagtgtatcagtgtcaggccagaaattcagtaggagagaccatgtctacaaac
attacccaagtatctgtgaagtatcatccacaaaacacattcattgacggcacaagtgaa
ataaagttggggtttgaacttaaccttaaatgtgttactgaggccgatcctcttcctcac
aaatattcctggtattttaaaccagaacatgaacagcagtttgtcaccctttcacacacg
gatgagatgtaccggattgagaaagtggctgttagtaatgctgggttgtataagtgcagt
gcgcagaacgttgtaggtaaaggagcaaactctactgaaataaacgttcttgtgttctat
ccccccaaaacaccaaatctgaccatgaaagaagttgtagaggaagaagaattatatact
ataacatgcactgtagaaagctcaccccaggcgacgctcacactaagcagatcctctctg
acaaacccagaaaaagacataatcacagttcagtatgttcagtccaacatactcaaattt
gctgccaatgcgaccgtgtcagatgcaggtatgtacacctgcgaagcggaaaacacagag
ggaaaaaacttctcaaaaaatcagctgaaagttttgtatgcccctaaaaatgttactgca
ttagcagatcctggtgtagagctaaaggaaggctctaacctgacactcacctgtaaagct
gattcccttcccgaggtgtctgcttacacatggaagaaatcttctgcgacacactcacag
acagtggggcatggacagaaaataacactccatttcctgaagagctctgactctgaccat
tacttctgtatctccagaaatgaaattggcagtgctaagtcctcatcaatatatatcaga
atcaagtatgctccaaaaggtgtcgatatcaatcctaaattagctgaactcaaagaggga
gacaggcttacactcacatgtctggtgcaaaagagtaatccagaagttgacatgcagtcc
tacagatggtacaaagatggtcaagagattaatcaacaaacaatgaatacattcactgtg
ccaagtgtaagacagcgtgataaaggagtgtatcagtgtcaggccagaaattcagtagga
gagaccatgtctacaaacattacccaagtatctgtgaagtatcatccacaaaacacattc
attgacggcacaagtgaaataaagttggggtttgaacttaaccttaaatgtgttactgag
gccgatcctcttcctcacaaatattcctggtattttaaaccagaacatgaacagcagttt
gtcaccctttcacacacggatgagatgtaccggattgagaaagtggctgttagtaatgct
gggttgtataagtgcagtgcgcagaacgttgtaggtaaaggagcaaactctactgaaata
aacgttcttgtgttctatccccccaaaacaccaaatctgaccatgaaagaagttgtaaag
gaagaagaattatatactataacatgcactgtagaaagctcaccccaggcgacgctcaca
ctaagcagatcctctctgacaaacccagaaaaagacataatcacagttcagtatgttcag
tccaacacactcaaatttgctgccaatgcgaccgtgtcagatgcaggtatgtacacctgc
aaagcggaaaacacagagggaaaaaacttctcaaaaaatcagctgaaagttttgtatgct
cctaaaaatgttactgcattagcagatcctggtgtagagctaaaggaaggctctaacctg
acactcacctgtaaagctgattctcttcccgaggtgtctgcttacacatggaagaaatct
tctgcgacacactcacagacagtggggcatggacagaaaataacactccatttcctgaag
agctctgactctgaccattacttctgtatctccagaaatgaaattggcagtgctaagtcc
tcatcaatatatatcagaatcaagtaccggccacgcataacacttatccacaacatgaca
tcactgggtctatgggaaaaggcggtaccaatccacctgagttgcagtgttcagtgtgat
ccaccagccactttctttgcatggtacaagatggaggaaaacaccactgtcttgtcaaat
aatgtgaactacacagttcaaccacaaaacccaggaacgtactactgctacgcacgcaat
gaagaaggggaatcaagatctgaaccagtcaaaatatttcttaatcatttcattattaaa
cagctcgttcaggtcatcatctccttactggtcatcgtgtttctgattggtgtcatattt
ctgatacagagaatcatcctgagaaaaagatcagcccaacggtcatttttcttctcagca
gctccattatgttttttatcggacttgggttcatcggactcatgtaataacactagggag
aacttggtgatggagggatctacagagctctccagcttcagagataatcattctgctgtt
caatcaaatcctccagccaacaggaacatacaagcaggaaggccaaattctaacattcca
tccaagcagaaacagcatcatacagaagaggatttaaccatgaccactgtgaattatgct
atgctgcagttcgtggacagcaacaatccaaataaaagtgtaccgagccatgacgattct
ggcccagtctatgctgacgtttcaaaaaataaacaaatggcaaagaaaccacaagatggt
catgaagattatgaaaacgtctcgggtgtgtgccgcgaagcggccatttcccaacataaa
ctgggactcggacagcagtga
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integrated database retrieval system