Ictalurus furcatus (blue catfish): 128621790
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Entry
128621790 CDS
T09387
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03440
Homologous recombination
ifu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128621790 (brca2)
03460 Fanconi anemia pathway
128621790 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128621790 (brca2)
03036 Chromosome and associated proteins [BR:
ifu03036
]
128621790 (brca2)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128621790 (brca2)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128621790 (brca2)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128621790 (brca2)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
128621790 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
128621790 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
128621790
NCBI-ProteinID:
XP_053503730
LinkDB
All DBs
Position
17:complement(25128656..25149818)
Genome browser
AA seq
2610 aa
AA seq
DB search
MFDDFFHQIETELGPLNSDWFEELTVRASENGRDDSTVVEHDASAHKDNAVFSAPAKTPV
SDSQMCSTPRIFRCRRPRPAASGLEESPDSGLQNLFPVPPGAESSPCLFGLAKDSQRFEK
DWGSLKTSACLDLLDTPTGLTTQASSAQRICESLGAQLNPDLSWSSSFNTPSALTPTVIL
SKTEGQSSPGSFLRDKEVIIVRKLFPSLSKGTESTSACTSNAQHNDTLTDGNVQAEEQKS
DSSSDNIEGIWKQTVPDAIKDDNVRNTVERVLNGAEDVLSFLFTNSSSALRRVKTMERKK
RVNGVSKDVKSNPMTLDCATGCISASKPDTVTAVASLKSPLFSNQLNNNNKDFTQWTPLS
LSDVPDSKCISELSSKHTSPHVDSLRQRFSPDSCHEKSQGRSCLSDSSPGLTFSRKPRKF
VYRVQNSESKRTPSVTGTSFLERDHPASLNMDHDLDTTQLCQAFAEDFSQEANVLNSPPR
SAQSSHDGVLTPACAAIEMSEVRRETESVVRCEGLAEHQEAEIIRLTNTPSVESTNRDSG
YPTVCSGFSLETPPPSDTEHIHSGFKTANNKIIAIPLEAVMKAKAALDESVEHTTCTGAS
SVTEAMKAGTKQYKSYKPVTANAAREKSLSGSYHRGYGEAGRETSDGSVSRSEAAAENVP
STFMCQTNESGFNTASNKSITVSRANLEKAKDVSTESDEETFDPCPSNNELQVCDVKDAR
PSKPSRRSTGDDHGGSSLTASQRADVTELCIMLEETGSQDEFTQFKPTKIGSKCPDSMPF
EREWDPELLAGIDFDDSFNCDLTVKQVSNKHQPKDVRQTSDMPASVPNSLTNGDVAVQSI
NARKSCRVPWEMPNMADESLQEKSFCSGFKTAKGNAVTVSEKCLSKARSLFADIESTEGH
FGLQSDCKADLVKQKERQSSDHQDIAMESVLELKPRSNLCNGDASSITKDAETCEQTCSE
ANLETQGTVVEKPDLMGNFGFTTAAGKEVKVSEKALQNAKKLLNEFAKDKETKHDNSPAK
TKATTWTSVQNSSNVLEDVLHDPKTSDGSLPKGGKEHPFENSPEIKQATSPPSPRSVDGN
GFKTASDKGASVSASAIQKSKPIFKDLDDSPRSPDETKSTEENTKPDVEGDAGQHAFVGG
FKMASGKGVSFSEKAFMKAKTFFQNRDPDRMDISQVKGDDTSVMDDCGFEAVAGNAVRLP
GIDSLNKETLKKDSTDLNKYVQRKFTKTSTETLQAPSGCGFSTASGAVVSVSAEALQRVK
AMFDYSNAASPGERRLEISEEKNTSRNETGKTCGFTTASGRKVAISEKALQKAKSLFTDC
DVDGFGPDPCNSSAAKTSAASPERTRLPFNTASKKHIALSERELNKSKDEFVSCDDVSVE
NPLTIQTRQRDSRNREALSNTTESVPANAGKSAGRYENTMNGGPKADRLGSGTCGFSTAS
GKGVSVSESALAVAFEMFRDCDAQSVPNGQCKVTSGGPFANIDKTAAVPNTKATSPSLPS
QATRDNPSLLSRHSLNLDGCTVTQRKYFEQEAMACTKALLEDELNEDGLSSSSDSGIRQR
PPVLQEGCLEVNAGIRKRTSDDKSLTGQPPLKRRLVSEFDRISEDRTACAPVKSSPNGTL
RDRRVSTYNFKPNITYPSRNVVDQTSADPDHQKRRPSDSKAPVFMPPFRKNLQVEMPKNC
VPTAVAQVPSVFVPPIKKKDASGSVCVKVKASPQISGDSAAITSSSCEIGRNHSVGKAED
GKAAAETEREGMLENHTTDPCETKVIWQHSLELAQDVQNMRIRKKTRQRVRPLPGTFYLA
KTSGVSRVSLKEAVGYKCPELHTVEQLYQHGVSFKVSQTTSENAESFRFSCDEFFRREAL
EESGGVQLADGGWLIPDHRGMLGKEEFYRALCDTPGVDPKLISEAWVYNHYRWVVWKQAS
MERAFPEVMGGRCLTPEQVLLQLKLRYDVEVDHSRRSALKKITERDDTPAKTIVLCVCGI
AKREHSPVRSEEATDPARPKPESPAAVVWLTDGWYSIKALLDAPLSAMLRKGRLRAGVKL
LIHGAELIGSQDACPPLEAPDSLMLKISANSTRRARWDTKLGFHKDPRPFPLLLSSLYAN
GGVVSCVDIIVLRIYPAQWMEKKPGPVFVFRNERAEDREAARYNSTKQKTMELLFSKIQA
QIEKEEEEKKKTWRCRSFSLHEIKNLQEGEELHEAMESDPAFVEPHLSSEQVRAVSSYRR
ALTERKRAELQDRVHKATQEAEGGCANRDVTPVWKLSIADSNDLYSSCVYTLNIWRPSAE
LRSVLREGCRYKAYHLATSETKKHSGTSNIQFTATKKTQFKDIEVCPEWLSLHFPARQSA
KFRDLQSPGFSSPCGEVDIVGYVISILDRQGTSPVLYFVDEKFDFVSVRLCSSLALLALE
DLVKPLALLTVSNLQLRQQSGPLPSLYAGEQALFSTNPKEAHLQEAVSRLKTFAEDYEHF
FIVAEEKLSNLIPEGFSNSRESQRTPGLPSGPKPSVRNNVTPLQTSRVFSPFTPVTKRTP
VATGNSDTKDPKSVKRKRGIEYLSRLQNPAPTLVPLGMVRSPRVSKTFNPPRRCETPRNP
QTVLTPPAQNKQWVNDEELAMINTQTLLKR
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgacttcttccatcaaatcgaaacagagctcgggccactaaactcggactgg
tttgaggagttgactgtgagagcctccgaaaatggacgtgatgactccaccgtcgttgaa
cacgacgcctcggcacataaggacaacgccgttttcagcgctccggctaagacgccggtc
tcggacagtcagatgtgttcaacacccagaatatttaggtgtagaagaccacgtcctgct
gcgtcaggtctcgaagaatctcccgattcagggctgcagaacttgtttcctgttccaccc
ggtgcagaatcaagcccgtgtctgttcggcttagctaaagacagccagcggtttgagaaa
gactggggatcactaaagacaagcgcatgcttggatctacttgacacaccgacgggatta
acaacacaagcgtcgtccgcacagcgcatctgcgagagcctcggagctcagttaaatcct
gatctatcttggagcagttcctttaacacaccatcagcgttgacccccacggttattttg
tccaaaacggaaggccagtcttcaccaggaagttttctcagggacaaagaagtcattatt
gtacgaaagctgtttccgtcactctcaaaaggcacggaatcaacatccgcatgtacatcc
aatgcacaacacaacgacacactaacagacgggaatgtccaggcagaagagcaaaaatct
gattcatcctctgacaatatagaaggcatttggaagcagacggtaccggacgcgataaag
gacgacaacgtgcggaacacagtggagagggtgcttaacggcgccgaggacgtgctgtcc
ttcttgttcaccaacagcagctcagccctgcgaagggttaaaaccatggaaagaaaaaag
agagtgaacggcgtctctaaggacgtaaagtcaaatcctatgacgctagattgcgctaca
ggttgtatatcggcatcgaagccagacaccgtcacagctgtcgcaagtttaaagtcccct
ttattttcaaatcagcttaataataataataaggatttcacacagtggactcctctgagt
ttatccgacgtcccagactctaagtgtatctctgaactatcaagtaaacacacgagtcct
catgtagactccttacgacagaggttctctcccgattcgtgccacgagaagtctcaaggg
cgaagttgtttatcggactcgtctccaggacttaccttctcgagaaaacccaggaagttc
gtgtatcgagtgcaaaattcggaaagtaagagaacgcccagcgtcactggtacgagtttt
ctcgagcgggatcatcctgcgagtcttaacatggatcatgaccttgatacgacccagctt
tgccaagcgttcgcagaggatttcagtcaggaagcgaacgtgttaaactcaccacccaga
agtgcacagagcagccacgacggtgtcttaacgccggcttgcgcagcaatagaaatgagc
gaagtgcggcgtgaaacagaatctgtggtacgttgtgaaggccttgccgagcaccaggaa
gcagaaataatccgtttaacaaacacaccatctgtcgagagcacaaaccgtgacagtggc
tatccgacagtttgttctggttttagcctggaaactccgccacctagtgacactgaacat
attcattccggttttaaaacagcaaataataagattatcgcaatacctcttgaagctgta
atgaaagctaaagcagcattagacgaatccgtagagcacacgacatgtacgggcgcttca
agtgtaaccgaagcaatgaaagcaggtacaaaacagtacaaatcttacaaacctgttaca
gcaaacgctgcccgagagaaatcgctttcgggaagctatcaccgtggatacggtgaagcc
ggaagagagacctctgacggaagcgtttcaaggtccgaggcagccgcagagaatgttcct
agcacgttcatgtgccaaacaaacgaatctggcttcaacacggcatctaacaaaagtatc
acagtctcacgtgcgaacctcgagaaagccaaagacgtgtccacggagtcggatgaagag
acgtttgatccgtgtccgtcaaataacgagctgcaggtctgcgatgtaaaagatgccagg
ccgtctaaaccttcacgacgttccactggtgacgaccacggcggttcgtctttgaccgct
tcgcaaagagcggacgtgacggagctgtgcatcatgttggaagagaccggcagccaggat
gagtttacacagtttaaacccacaaagattggctcaaagtgtccagatagcatgccgttt
gagagagagtgggatcctgagctactcgctggtattgactttgatgatagttttaactgc
gatttaactgtgaagcaggtgtcaaacaaacatcagcccaaggacgtgcgtcagacatca
gacatgcctgcttcggtcccaaacagtctgacgaacggagacgtggctgttcaaagtata
aacgctaggaagtcatgccgtgttccatgggaaatgccaaatatggccgatgagagtctg
caagaaaagtctttttgttctggctttaaaactgcaaagggaaatgctgtgaccgtctcg
gagaaatgtctgagcaaggcaagaagcctttttgcagatatagagtccaccgaaggacac
tttggtctccagagtgactgcaaagcagatctggttaaacaaaaggaaagacagtcaagt
gaccaccaggacattgccatggaatctgtgcttgaactaaagccaaggtcaaatctgtgt
aacggagacgcaagctcgataacgaaagacgctgaaacgtgcgaacaaacgtgtagcgaa
gcaaatctggaaacacaaggaactgtagtagagaaaccagatttaatgggcaactttgga
tttactactgctgcaggaaaggaagtaaaggtctcagaaaaagctcttcaaaatgcaaag
aaactcctaaacgaatttgcaaaggacaaagaaaccaagcacgataattcccccgcaaaa
accaaagccaccacttggacttcagtccaaaattcttctaacgtgttggaagatgtactt
catgatccaaagacgtctgatggatctttaccaaaaggtgggaaagaacacccttttgaa
aacagccctgagataaaacaggcaacgagtcctccgagtcctcggtccgtggacggtaac
gggtttaaaacggccagcgacaaaggagcgtctgtctcggcgagcgcgattcagaaatca
aaacccattttcaaagatctcgatgacagcccgagaagcccggatgaaaccaagtcaacg
gaagagaatacaaaaccggacgtcgaaggagatgcaggccagcacgcgtttgttggcgga
ttcaagatggcaagtggtaaaggagtgagcttttctgaaaaagcgtttatgaaagccaag
acgttctttcaaaatcgtgatcctgatcgcatggatatttctcaagtaaaaggagacgac
acaagtgtgatggatgactgtggcttcgaggcggttgcgggaaacgcggtgcgcttgcca
ggaatagacagtctgaacaaagagacgttaaagaaagactccacagatttgaataaatat
gtccaaaggaaattcactaaaacctccactgagactcttcaagcaccatctggctgtggt
ttcagtacagcaagtggtgctgtggtgtccgtttcagccgaagcacttcagagagttaaa
gctatgttcgattattcaaatgctgcttcacctggtgaaaggagattggaaatatcagaa
gagaagaatacttccagaaacgagacgggaaaaacctgcggctttactactgcgagtgga
aggaaagttgccatttctgagaaagccctccagaaagcaaagagtctttttactgactgt
gatgtggatggattcggacctgatccctgtaattcatcagctgcaaagacatcagcagca
agtcctgagcgtacaagattacctttcaacactgccagtaagaagcacattgcactgtca
gaaagggagctgaataaaagtaaagacgagtttgttagttgtgacgacgtttcagtcgag
aacccgttaaccatacagaccaggcaacgcgatagccgtaatcgcgaagctttgagtaat
acgacggaaagcgttccagctaacgctggaaaatctgcagggagatacgagaacacgatg
aacggaggcccaaaggctgatcgcttaggatcaggaacttgtggttttagcacagccagc
ggaaaaggcgttagcgtgtcggaatcggccctcgcggtagcttttgagatgtttagagat
tgtgatgcacaatcagttcctaacggacagtgcaaagttaccagtggaggtccgtttgca
aatattgacaaaacagcggctgtgccaaacaccaaagccaccagtccatctctcccatca
caggccacacgggataatccttccctgctgagccgccattctttaaatctcgatggatgc
actgtaacccagcgaaaatatttcgagcaagaagcgatggcttgcactaaagcactttta
gaggatgagctcaacgaggacggtttgtcgagtagctcggacagtggcattaggcaaagg
cctcccgtgcttcaggagggatgcttggaggtgaacgcaggaatacgaaaacggacctca
gatgacaagagtttgacaggtcaaccccctttgaagagaagacttgtgtcagagttcgac
cggatctcggaagacaggacagcctgcgctccagtgaaaagcagccccaatggcacactg
agagacagaagagtctccacatacaacttcaagcccaatatcacttatccatccaggaat
gttgtggaccaaacctcagccgacccagatcaccagaaaaggagaccgtcagactccaag
gctccagtgtttatgcccccatttcgaaaaaatcttcaggttgagatgcctaaaaactgt
gttcctacagctgtggcccaggttcccagtgtgtttgttcctcccattaaaaagaaagat
gcgtcaggtagcgtttgtgtgaaggttaaggcttcaccgcagatttctggcgattccgca
gcaatcacaagctctagttgtgaaatcggcaggaatcactcggtcgggaaagcagaggac
gggaaagccgcggcggaaaccgagagagaggggatgttggagaatcacaccactgatcct
tgtgaaacgaaagttatttggcagcactccttggagttagcgcaagacgtgcagaacatg
agaatcagaaaaaagacgcgccagagagttcgacctctgcctggcacgttttatctggct
aagacgtccggggtgagcagagtttccctgaaagaggctgtaggatacaagtgtcctgag
ctacacacggtagaacagctctatcagcatggtgtatccttcaaagtgtcccagacaacc
agcgagaatgccgagtcgttccgattcagctgcgatgagtttttcagacgtgaggctctc
gaagagagtggaggggttcagctggctgatggagggtggctgattccagatcacagggga
atgctgggtaaagaggagttctacagagccttgtgtgatactcctggtgtcgaccccaaa
ctgatcagtgaagcatgggtgtataaccactatcggtgggtcgtgtggaaacaagcctcc
atggaaagagccttccctgaagtgatgggtggtcggtgtctcactccagagcaggtgctc
ctgcagctcaaactcaggtacgacgttgaggtggaccacagtcgaagatcagccctgaag
aagattacggagagagacgacaccccagccaagaccatagtgctctgtgtgtgtggaatc
gccaaacgcgaacacagtccagtcaggtcagaggaggccaccgaccccgcacgtccaaag
cccgagtcgcctgctgcggtcgtttggcttaccgacggctggtattccattaaagcgctg
ctggatgctcctctgtctgccatgctgcgaaagggccgtctcagagcgggcgtgaaactt
ttgatccacggagcagagctgatcggctctcaggacgcctgtcctcctctagaggctccc
gattcactcatgctcaagatttcggccaacagtacgagacgagctcgctgggacaccaag
cttggcttccataaagaccctcgaccctttcctctgttgctttcatcactgtatgctaat
ggaggagtggtgagctgtgtggacatcatcgtgttgcggatttacccagcgcagtggatg
gagaagaagccaggtccggtctttgtgtttcgcaacgagcgagccgaagacagagaggct
gcacgctacaacagcaccaaacagaagaccatggagctcctgttctccaaaatacaagcc
cagattgagaaagaggaagaagaaaagaagaaaacctggagatgcagaagttttagtctc
catgagattaagaacctgcaggaaggggaggagcttcatgaagcaatggagagtgatcca
gcttttgttgagccccatttaagctcagaacaggtgagagctgtgagtagctacagacga
gcgttaaccgaaaggaagagagctgagctacaggatcgggtgcacaaggctacgcaggag
gccgaggggggctgcgctaaccgcgacgttactcccgtctggaaactctccatcgctgac
tcgaatgatttgtacagcagctgtgtatacacactgaatatctggcggccctcggcggag
ttgcgctccgtactgagagagggctgcagatacaaggcttatcatctggccacatcggag
accaagaaacactccggaacgtccaacatccagttcaccgccaccaagaaaacccagttt
aaggacattgaggtttgcccagaatggttaagtctgcattttcctgcaagacaatcagcg
aaattcagagatctccagagccccggattcagctctccatgtggagaagtcgacatcgtg
ggatatgtgatctccatcttggacagacaaggtacgtctcctgtgttgtactttgtggat
gaaaagtttgactttgtctccgtgaggctctgcagcagcctggctcttctcgctctggag
gacctggtaaagccattagctctactgactgtaagcaacctgcagctccgacagcagtct
ggcccactccccagcctttatgctggagaacaagcactgttctctacaaaccctaaagaa
gcccacttacaggaagctgtttctcgtctgaagacgtttgctgaggattatgagcatttc
ttcatagttgctgaagagaagctctcgaacctgattccagaaggtttctcgaactctcgc
gagtcccaaagaactccaggtttaccatccgggccaaaaccaagcgtcagaaataacgtt
acaccccttcagacaagccgagttttctcccctttcaccccagtgaccaaaagaacccct
gtagcaactggaaactcggacaccaaggaccccaagagtgtgaaaaggaagcgtggtatt
gaatacctgtcgcgcctccaaaacccagcacccaccctcgttcctctgggaatggtccgt
tctcccagagtcagcaagacctttaaccctcccaggaggtgcgagactcctcgtaatccc
cagacagttctaactccaccagcacagaacaagcagtgggtgaacgatgaggaactggcc
atgataaacacacaaacactactaaagaggtag
DBGET
integrated database retrieval system
