Ictalurus furcatus (blue catfish): 128621968
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Entry
128621968 CDS
T09387
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ifu03009
]
128621968 (ddx52)
Enzymes [BR:
ifu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128621968 (ddx52)
Ribosome biogenesis [BR:
ifu03009
]
Eukaryotic type
90S particles
Helicases
128621968 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
TFIIF_alpha
NTR2
SNF2-rel_dom
SecA_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128621968
NCBI-ProteinID:
XP_053504017
LinkDB
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Position
18:complement(23523798..23532124)
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AA seq
616 aa
AA seq
DB search
MDAVDLFKRLGSGAKFDFKRFGRDAERFKVVRSQNKEIANPLADIGFFGKTRDEPAEDSR
CDDDDDDDDDEHGSEEDNLTIADESLRKPKRKKKENKRKTQDSEDESNDDDDDDSEQTGI
RWMSSQDKKAKGPKKKTTDGPSIKRLKQLHREKLNQIRHQNRINVHGTDVPDPLSTFEEL
QQEYELDSRIIQNIRAAGFQTPTPIQMQAIPLMMHRREILACAPTGSGKTIAFCLPVLAH
LRQPLNKGFRALIVAPTRELASQTYRELLKLSEGVGFRVRMINKGVDAAKKYGPKSAKKF
DILVTTPNRLIYLLNQEPPAVDLGSVEWLVVDESDKLFEDGKTGFREQLATIFLACTSPK
VRRALFSATFTTEVEQWCKLNLDNLVSVNIGPRNSAAETVEQELLFVGAENGKMLAIRDM
IKKGFLPPVLVFVQSIERARELFHELVYEGINVDVIHAGRTQQQRENVVNSFRAGKIWVL
ICTALMARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAITFFTEADKPLLRS
IATVIKQAGCPVPDYMIGFKKLKSKVKRHLEKKPPRRSTIRTTPRFLMKNNPGKVKRKKG
KAEASACGGEPNDSKK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtggacttgttcaagaggcttggatctggcgcaaagtttgattttaaaaga
tttggcagagatgcggaaagatttaaggtggtgaggtctcagaacaaagagatcgccaac
cctttggccgatattggcttctttggcaaaaccagagacgagccagctgaagactctaga
tgtgatgatgatgatgatgatgatgatgatgagcacgggtcagaagaagataacctgacc
atcgcggatgaatccctgcgcaagccgaaaagaaaaaagaaagagaataaaagaaaaact
caggattcagaagacgagagtaatgatgatgatgatgatgattcagagcagacagggatt
cggtggatgtcttcacaagacaagaaggcgaaaggaccgaagaaaaagaccacagacgga
ccatcaataaagagattaaagcagctgcatagagagaagctcaatcagatccggcatcag
aacaggattaacgtgcatggcaccgacgtcccagaccctctcagcacgttcgaggagctt
cagcaggagtacgagctggattcccggatcattcagaacatcagagcagctggctttcag
acccctacgcccattcagatgcaggccatccctctcatgatgcacagacgagaaatcctg
gcgtgtgcccccacaggctcggggaaaaccatagcgttctgcctgcccgtgttggcgcat
ctccgtcagccgctcaacaagggtttcagagcgctcatcgtagcacccacgagagagctg
gccagccagacgtacagggagctgctgaagctgtccgagggagtgggcttcagggttcgc
atgattaacaaaggagtggatgcagccaaaaaatacggtcccaagtcagccaagaagttt
gacatattggtgacgacaccaaacaggctgatctacctgctcaaccaggagcctccagct
gttgatctcggcagtgtggagtggttggtggtggacgagtccgataagctgtttgaggac
ggtaagaccggcttcagggagcagctggcgaccatcttcctggcctgcacctctcccaaa
gtccgccgcgctctcttcagtgccactttcaccacagaggtcgagcagtggtgcaaactc
aatctggacaatctcgtctctgttaacatcggacccaggaactccgcggcagagacggtc
gagcaggagcttctgtttgtcggtgcagaaaatggcaagatgctcgctataagggacatg
atcaagaagggctttctgcctcccgtgctggtgttcgtgcagtccatagagcgggcccga
gagttgttccatgagctggtgtacgagggcatcaatgtggatgtgattcatgcagggcgc
acacaacaacagagagagaacgtggtgaacagcttccgtgccggtaagatctgggtgctc
atctgcacagcgctcatggctcgagggattgacttcaaaggcgtcaacctggtgataaac
tacgactttcctacgagtgccgtggagtacattcatcgcataggccgcacaggaagagca
ggtcataaagggaaagccattacgtttttcacagaggccgacaaaccgctcctgcgcagc
attgccacagtaataaaacaagcgggatgtcctgtgcctgattacatgattggattcaag
aaactaaaaagcaaagtgaagcggcatcttgagaagaaaccaccgaggaggtcaacaatt
cgcacaacgcctcggtttctcatgaaaaacaatcccggaaaagtgaaaaggaaaaagggg
aaagctgaggcaagcgcatgtggaggtgaaccgaatgactctaagaaatag
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