Ictalurus furcatus (blue catfish): 128622002
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Entry
128622002 CDS
T09387
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04120
Ubiquitin mediated proteolysis
ifu04144
Endocytosis
ifu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128622002 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128622002 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
128622002 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128622002 (nedd4l)
04121 Ubiquitin system [BR:
ifu04121
]
128622002 (nedd4l)
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128622002 (nedd4l)
Membrane trafficking [BR:
ifu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128622002 (nedd4l)
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
HECT type E3
128622002 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
DUF6009
MUG113
Motif
Other DBs
NCBI-GeneID:
128622002
NCBI-ProteinID:
XP_053504092
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All DBs
Position
18:8318245..8382950
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AA seq
1261 aa
AA seq
DB search
MSRRLRLYFGSNRSNTAPELQEVEDEDQNTHHTEYDVAGSGDMIFQMRPQNPSLEEDAPV
SGAFLKRSSSMFIPQLQSQTEPPRPTKSTSMQISLQRSSTPQEDVQSMDSPPGYPQDPAP
AYTEPAEDWLSSQSAFYRRRESQTTLITDQTNPGTDPAQPKRRVFCVRPHDLQNGLSPSG
IVNEGSPGISIGRLCIQRSATNGSDVQQFRIVPYSQDGQNGACRWSVQPTTDGNSGTRRL
VFQLQQDSGRTVATNGQREASELGCKGGRAVRYPRIRLERSTSQPLQPRQVPSRPGSMPN
LHAPISENEVDEDGAQGCTFKIRKEQDPRQAKFKIYFSQGGTHRSNSTQDISFGKGPTWN
DPKAHSGLDRHRNGLLHFGQTRDDFLGQVDVPLNYLPTEDPAMERPYTFKDFLLRPRSHK
SRVKGYLRLKMAYLPKNGAQEEESGEMREEAEGWEVDSVDHGGSRHSQQVLPPLPAGWEE
KVDNLGRTYYVNHNNRTTQWKRPSTVDMVSETESDNHLHQINQEAHRVFRSRRHISEDLE
NEHLDPRELDDPLPSQSWDPITEEDFSGMSEAVAGPAPSATPIHQFSTPEFSEEITMRLS
LTPNTNGEMGGANNTGSLLSSRLRSSSMTDGVSDQAQTPSPMTSQSRRTRAQTVTGLEQP
MSLPSGWEERKDTKGRTYYVNHNNRSTTWTRPILQHTEDGVSSTAGAVGGAVATTPSSSG
HLSEPQIRRPRSLSSPTVTLSTPPEGANSVPHPRAVKDTLSNPQSPQPSPYSSPKSQHKV
TQSFLPPGWEMRIAPNGRPFFIDHNSRTTTWEDPRLKYPVHMRVKGALDPGDLGPLPPGW
EERVHADGRTFYIDHNTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADI
PNRFEMKLHRGSIFEESYRRIMSLKRPDVLKSRLWIEFESEKGLDYGGVAREWFFLISKE
MFNPYYGLFEYSATDNYTLQINSNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRP
FYKMMLGKPITLNDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSG
SDLVVTNDNKKEYIDLVIQWRFVNRVQKQMNAFMEGFTELILIDLIKIFDENELELLMCG
LGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFA
ELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPAYETFDDLREKLLMAVENAQGFEGV
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccggctgcgtctctactttgggtccaaccgcagcaacacagctccagagtta
caggaagtcgaggacgaagaccagaatacacatcacacagaatacgacgtcgctggatcg
ggagacatgattttccaaatgcgtccgcagaacccgtcgcttgaggaggacgctcctgtt
tctggcgctttcttaaaacgaagctcctccatgtttatcccgcagctccagagccaaacc
gaaccgccaaggcccaccaagagcacgtccatgcagatctccctccagcgctcgtctaca
ccccaggaagatgtacagtccatggattcaccaccaggatacccccaggatccagctccg
gcatacaccgagcctgcagaggactggttatcttctcaatctgcattttatcgcagaaga
gaaagtcaaaccactctgatcacggatcagactaacccaggaacggatcctgcccagccc
aagaggcgagttttctgcgtcaggccacacgatttacagaacggactctctccttcggga
atcgtcaacgaagggtctccaggaatcagcatcggtaggttgtgtatccagcgaagtgcc
accaatggatctgatgtccagcagttcagaatagttccgtacagccaggatgggcaaaac
ggtgcctgccgttggtctgttcagccaaccacagatggaaattctggtactcggagactt
gtcttccagctccaacaggacagtggaagaaccgtggctacaaatggccagagagaggcg
tccgagctaggctgtaaaggtggccgtgcagtacgttaccctcgaatccgactcgagagg
agcacctctcagcccttacaacctagacaagtaccatcacgccctggatctatgcctaac
cttcatgcccccatctccgagaacgaagtcgatgaggacggagctcaaggctgcaccttt
aagatcaggaaagaacaggatccgaggcaggccaagttcaagatatatttcagccaagga
ggcacccacaggtctaactcgacacaggatattagctttggaaaaggacctacctggaat
gacccaaaggctcactctggtctcgatcgacacaggaatgggcttttacacttcggacag
actcgagatgacttcctgggacaggtggatgtgcctctgaattacttgccgacagaggat
ccggcgatggagcggccatacacatttaaagacttcctcctcaggccaagaagtcataag
tcaagggtgaaaggttatctgaggctgaagatggcatacctgccgaagaacggtgctcag
gaggaggagagcggcgagatgagggaggaggctgagggttgggaggtggactcggtagat
cacggcggttctcgtcattctcagcaggtccttcctccattgccggcaggttgggaagag
aaagtggataatctcggccggacgtattacgttaatcacaacaaccgaaccacgcagtgg
aaaagacccagcacagttgacatggtatctgagacggaaagcgataatcacctgcatcag
atcaaccaggaagcgcaccgagtgtttcgctccagacgtcatatcagcgaggacctggag
aacgaacacctcgacccccgagagcttgatgatcccctcccctcccagtcctgggaccct
atcacagaagaggatttctcagggatgagtgaggctgtggctggccccgccccctctgcc
acacccattcatcagttcagcactccagagttttcagaggagatcaccatgagactgtca
ctcacgcctaacaccaacggagaaatgggcggagcgaacaacaccgggtctctcctgtca
tccaggttgcgttcctccagtatgactgatggagtgagtgatcaggctcagactccctcg
cctatgacgtcgcagtccagacgaacccgagcccaaacggtcacaggcctagagcagccc
atgtccctgccttcaggttgggaggagagaaaagacaccaagggccgaacttattacgtc
aaccacaacaaccggagcacgacgtggacacgccctattctccagcacactgaggatgga
gtgagttctactgcaggagctgtaggaggtgctgtagctactacaccttcatccagcggc
catcttagtgaaccccaaatacgccgacctcgtagccttagttcccccacagtcaccctg
tccactcctccagagggagccaatagtgtgccgcatcctcgggcggtgaaggacacactc
tcgaacccgcagtcgcctcagccttcgccttacagctcgcccaaatcccaacacaaggtc
actcagagtttcctgcccccagggtgggagatgaggatcgcccccaacggacggccgttt
ttcatcgaccacaatagcaggacgaccacatgggaggatccacgtttaaagtaccccgtt
cacatgagggttaaaggagcgctggaccccggcgacctcggcccacttcctccgggatgg
gaggagcgagtccacgcagatggaagaacgttctacatcgaccacaacacgaagaacaca
cagtgggaagaccctcgactacagagtcccgctattacaggaccggccgtgccatactcg
cgagagtttaaacagaagtatgattacttcaggaagaagttaaagaagccagcggacatt
cctaaccgttttgagatgaagctgcacagaggcagtatattcgaggagtcctacaggcgg
atcatgtctctgaagaggccggacgttctgaagtcccgcctctggatcgagtttgagtcg
gagaaagggctggactatgggggcgtggccagggagtggttcttccttatatctaaggag
atgttcaacccttattatgggctgtttgagtactctgccacagataactacacgctccag
attaattcaaactcagggttgtgtaacgaggatcatctctcgtacttcaagttcatcggg
cgagtggcgggcatggcggtgtatcacggcaagctgctggacggtttcttcatccgacct
ttttataagatgatgctgggaaaacccatcacattgaatgacatggagtcagtggacagt
gaatactacaactcactgaagtggattttggagaacgacccgacggagctcgacctgcgc
ttctgtatcgatgaggacaacttcgggcagacataccaagtggatctgaagccgagcggg
tctgatctggtcgtcaccaacgacaacaagaaggagtatatcgatttggtgatacagtgg
cggtttgtgaacagggtacagaaacagatgaacgcctttatggagggattcacagaactg
attctcatcgacttaattaagatcttcgatgagaacgagttggagttgctgatgtgtggt
ctgggtgatgtggacgttaatgactggagacaacacaccgtgtataaaaacggctactgt
ccaaatcaccccgtcatccagtggttctggaaggccgtgttgttgatggacgctgagaag
aggattcggctgctgcagttcgtcacaggaacgtctagagttcctatgaatggctttgct
gagctctatggttcgaacgggccgcagttgtttaccatcgagcagtgggggaccccagac
aaactcccccgtgcacacacatgttttaaccgtttggatctgccagcttatgagacgttc
gatgatctgagggagaagctgctgatggctgtggagaacgcacagggcttcgagggagtc
gactag
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