KEGG   Ictalurus furcatus (blue catfish): 128622026
Entry
128622026         CDS       T09387                                 
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu00565  Ether lipid metabolism
ifu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    128622026 (pafah1b1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ifu03036]
    128622026 (pafah1b1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ifu04147]
    128622026 (pafah1b1b)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128622026 (pafah1b1b)
Exosome [BR:ifu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128622026 (pafah1b1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EML NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_RIG_2nd LisH WD40_RFWD3 Beta-prop_SPT8 LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc Nucleoporin_N ARMC9_LisH LisH_2 SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 128622026
NCBI-ProteinID: XP_053504176
LinkDB
Position
18:complement(23333636..23348591)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPMGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIKTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFAGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVTATKECKAELREHEHVVECISWAPENAYPTILEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGRFIVSCADDK
TLRTWDYKNKRCMKTLSAHEHFVTSMDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagaggcaacgagatgagctaaatcgagcgatagcggattacctccga
tcaaatggctatgaagaggcttattctgtttttaagaaggaagcagagttagatatgaat
gaagaattagataagaagtatgcaggccttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagctggagtccaagctgaacgaagctaaagaggagatcact
ttaggagggcccatggggcagaaaagggaccccaaagagtggatcccgcgccccccggag
aagtacgcgctcagcggacacaggagtcccgtcacgcgcgtcatctttcatcccgtcttc
agcgtcatggtgtctgcctcggaagacgccacaattaaggtgtgggactatgaagcggga
gacttcgagagaactctgaagggtcatacggactcggtgcaagacatctcctttgatcag
accggaaagttgctggcctcctgctcggcagacatgaccatcaaactctgggacttccag
ggcttcgaatgcatcaagaccatgcacggacacgaccacaatgtgtcatcagtcgccatc
atgcccaatggtgatcatattgtgtctgcatcgagggataaaaccattaaaatgtgggag
gtggccactggttattgtgtgaagacgtttgcgggtcatcgggaatgggtgaggatggtg
cggcccaaccaggacggcacgctgttggccagctgctccaacgaccagaccgtgcgtgtg
tgggtcactgccaccaaggagtgcaaagctgagctgcgggagcacgagcatgtcgtggag
tgcatctcctgggctccggagaatgcctaccccactatactggaagccactggctcggag
aacaagaagagcggtaagcccggtccgttcttgttgtctggatcccgagacaaaaccatt
aagatgtgggatgtcagtactggcatgtgccttatgacacttgtgggccatgacaactgg
gtgcgtggtgtgctgttccacccgggtgggaggttcatcgtgagctgtgccgacgataag
accctgcgcacttgggactataagaacaagcgctgcatgaagaccctgagtgcccacgaa
cacttcgttacctctatggatttccacaagacttccccctacgtggtgacgggaagcgta
gatcaaacagttaaagtgtgggaatgccgctga

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